RNA–Protein interactions for RNA: ENST00000417572.5

SEC22C-205, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3 BASIC

Gene SEC22C, Length 1,513 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-205ENST00000417572 LIMA1Q9UHB6 759 aaKnown RBP14.08□□□□□ -0.16
SEC22C-205ENST00000417572 PLAGL2Q9UPG8 496 aa14.08□□□□□ -0.16
SEC22C-205ENST00000417572 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.08□□□□□ -0.16
SEC22C-205ENST00000417572 PTPRJQ12913 1337 aa14.08□□□□□ -0.16
SEC22C-205ENST00000417572 LRRC10BA6NIK2 292 aa14.07□□□□□ -0.16
SEC22C-205ENST00000417572 INPPL1O15357 1258 aa14.07□□□□□ -0.16
SEC22C-205ENST00000417572 HOXA2O43364 376 aa14.07□□□□□ -0.16
SEC22C-205ENST00000417572 POMCP01189 267 aa14.07□□□□□ -0.16
SEC22C-205ENST00000417572 THP07101 528 aa14.07□□□□□ -0.16
SEC22C-205ENST00000417572 PRKCSHP14314 528 aaPredicted RBP14.07□□□□□ -0.16
SEC22C-205ENST00000417572 TFAMQ00059 246 aaKnown RBP14.07□□□□□ -0.16
SEC22C-205ENST00000417572 PPP3CAQ08209 521 aa14.07□□□□□ -0.16
SEC22C-205ENST00000417572 TMEM132DQ14C87 1099 aa14.07□□□□□ -0.16
SEC22C-205ENST00000417572 ZBTB6Q15916 424 aa14.07□□□□□ -0.16
SEC22C-205ENST00000417572 NOMO2Q5JPE7 1267 aa14.07□□□□□ -0.16
SEC22C-205ENST00000417572 USP37Q86T82 979 aa14.07□□□□□ -0.16
SEC22C-205ENST00000417572 WDR49Q8IV35 697 aa14.07□□□□□ -0.16
SEC22C-205ENST00000417572 ABI1Q8IZP0 508 aa14.07□□□□□ -0.16
SEC22C-205ENST00000417572 TMEM130Q8N3G9 435 aa14.07□□□□□ -0.16
SEC22C-205ENST00000417572 OR5B17Q8NGF7 314 aa14.07□□□□□ -0.16
SEC22C-205ENST00000417572 PPP1R10Q96QC0 940 aaKnown RBP14.07□□□□□ -0.16
SEC22C-205ENST00000417572 TMEM117Q9H0C3 514 aa14.07□□□□□ -0.16
SEC22C-205ENST00000417572 MMRN2Q9H8L6 949 aa14.07□□□□□ -0.16
SEC22C-205ENST00000417572 INTS13Q9NVM9 706 aa14.07□□□□□ -0.16
SEC22C-205ENST00000417572 TAB2Q9NYJ8 693 aa14.07□□□□□ -0.16
SEC22C-205ENST00000417572 DERAQ9Y315 318 aa14.07□□□□□ -0.16
SEC22C-205ENST00000417572 C2CD2Q9Y426 696 aa14.07□□□□□ -0.16
SEC22C-205ENST00000417572 MICAL3Q7RTP6 2002 aa14.07□□□□□ -0.16
SEC22C-205ENST00000417572 TBKBP1A7MCY6 615 aa14.06□□□□□ -0.16
SEC22C-205ENST00000417572 ATP2A2P16615 1042 aaKnown RBP14.06□□□□□ -0.16
SEC22C-205ENST00000417572 GCLMP48507 274 aa14.06□□□□□ -0.16
SEC22C-205ENST00000417572 KCNH2Q12809 1159 aa14.06□□□□□ -0.16
SEC22C-205ENST00000417572 MAN2A1Q16706 1144 aa14.06□□□□□ -0.16
SEC22C-205ENST00000417572 DUOXA2Q1HG44 320 aa14.06□□□□□ -0.16
SEC22C-205ENST00000417572 MIIPQ5JXC2 388 aa14.06□□□□□ -0.16
SEC22C-205ENST00000417572 APTXQ7Z2E3 356 aaKnown RBP14.06□□□□□ -0.16
SEC22C-205ENST00000417572 NT5DC4Q86YG4 428 aa14.06□□□□□ -0.16
SEC22C-205ENST00000417572 ANKRD20A12PQ8NF67 263 aa14.06□□□□□ -0.16
SEC22C-205ENST00000417572 PHOSPHO2Q8TCD6 241 aa14.06□□□□□ -0.16
SEC22C-205ENST00000417572 URGCPQ8TCY9 931 aa14.06□□□□□ -0.16
SEC22C-205ENST00000417572 C18orf25Q96B23 403 aaPredicted RBP14.06□□□□□ -0.16
SEC22C-205ENST00000417572 ZNF689Q96CS4 500 aaPredicted RBP14.06□□□□□ -0.16
SEC22C-205ENST00000417572 RNPC3Q96LT9 517 aaKnown RBP14.06□□□□□ -0.16
SEC22C-205ENST00000417572 TSPAN18Q96SJ8 248 aa14.06□□□□□ -0.16
SEC22C-205ENST00000417572 VPS16Q9H269 839 aa14.06□□□□□ -0.16
SEC22C-205ENST00000417572 KANSL3Q9P2N6 904 aa14.06□□□□□ -0.16
SEC22C-205ENST00000417572 TTC3P53804 2025 aa14.06□□□□□ -0.16
SEC22C-205ENST00000417572 GJB5O95377 273 aa14.05□□□□□ -0.16
SEC22C-205ENST00000417572 C4BPAP04003 597 aaKnown RBP14.05□□□□□ -0.16
SEC22C-205ENST00000417572 GTF2H1P32780 548 aa14.05□□□□□ -0.16
SEC22C-205ENST00000417572 GUCY2FP51841 1108 aa14.05□□□□□ -0.16
SEC22C-205ENST00000417572 COPB1P53618 953 aaKnown RBP14.05□□□□□ -0.16
SEC22C-205ENST00000417572 SOX4Q06945 474 aaPredicted RBP14.05□□□□□ -0.16
SEC22C-205ENST00000417572 GRIK3Q13003 919 aa14.05□□□□□ -0.16
SEC22C-205ENST00000417572 NAB2Q15742 525 aa14.05□□□□□ -0.16
SEC22C-205ENST00000417572 VWA3BQ502W6 1294 aa14.05□□□□□ -0.16
SEC22C-205ENST00000417572 PAN2Q504Q3 1202 aaKnown RBP14.05□□□□□ -0.16
SEC22C-205ENST00000417572 SCARA3Q6AZY7 606 aa14.05□□□□□ -0.16
SEC22C-205ENST00000417572 ZNF280BQ86YH2 543 aa14.05□□□□□ -0.16
SEC22C-205ENST00000417572 HERC6Q8IVU3 1022 aa14.05□□□□□ -0.16
SEC22C-205ENST00000417572 CACTINQ8WUQ7 758 aaKnown RBP14.05□□□□□ -0.16
SEC22C-205ENST00000417572 ANKRD36BP1Q96IX9 119 aa14.05□□□□□ -0.16
SEC22C-205ENST00000417572 SLC9A7Q96T83 725 aa14.05□□□□□ -0.16
SEC22C-205ENST00000417572 ZBED2Q9BTP6 218 aa14.05□□□□□ -0.16
SEC22C-205ENST00000417572 MTMR12Q9C0I1 747 aa14.05□□□□□ -0.16
SEC22C-205ENST00000417572 TBC1D13Q9NVG8 400 aa14.05□□□□□ -0.16
SEC22C-205ENST00000417572 UBQLN1Q9UMX0 589 aaKnown RBP14.05□□□□□ -0.16
SEC22C-205ENST00000417572 STX10O60499 249 aa14.05□□□□□ -0.16
SEC22C-205ENST00000417572 DDHD2O94830 711 aa14.05□□□□□ -0.16
SEC22C-205ENST00000417572 SERPINC1P01008 464 aa14.05□□□□□ -0.16
SEC22C-205ENST00000417572 TNNC2P02585 160 aa14.05□□□□□ -0.16
SEC22C-205ENST00000417572 AFPP02771 609 aaKnown RBP14.05□□□□□ -0.16
SEC22C-205ENST00000417572 TMEM191BP0C7N4 346 aa14.05□□□□□ -0.16
SEC22C-205ENST00000417572 BMP8BP34820 402 aa14.05□□□□□ -0.16
SEC22C-205ENST00000417572 FMO5P49326 533 aa14.05□□□□□ -0.16
SEC22C-205ENST00000417572 AP3M2P53677 418 aa14.05□□□□□ -0.16
SEC22C-205ENST00000417572 FANCCQ00597 558 aa14.05□□□□□ -0.16
SEC22C-205ENST00000417572 CBWD6Q4V339 395 aa14.05□□□□□ -0.16
SEC22C-205ENST00000417572 CBWD3Q5JTY5 395 aa14.05□□□□□ -0.16
SEC22C-205ENST00000417572 CBWD5Q5RIA9 395 aa14.05□□□□□ -0.16
SEC22C-205ENST00000417572 C15orf39Q6ZRI6 1047 aa14.05□□□□□ -0.16
SEC22C-205ENST00000417572 SV2AQ7L0J3 742 aa14.05□□□□□ -0.16
SEC22C-205ENST00000417572 TRAPPC11Q7Z392 1133 aa14.05□□□□□ -0.16
SEC22C-205ENST00000417572 BEST2Q8NFU1 509 aa14.05□□□□□ -0.16
SEC22C-205ENST00000417572 NAP1L5Q96NT1 182 aaPredicted RBP14.05□□□□□ -0.16
SEC22C-205ENST00000417572 YME1L1Q96TA2 773 aa14.05□□□□□ -0.16
SEC22C-205ENST00000417572 NDST4Q9H3R1 872 aa14.05□□□□□ -0.16
SEC22C-205ENST00000417572 RC3H2Q9HBD1 1191 aaKnown RBP14.05□□□□□ -0.16
SEC22C-205ENST00000417572 GOLGA2P5Q9HBQ8 144 aa14.05□□□□□ -0.16
SEC22C-205ENST00000417572 TMEM8AQ9HCN3 771 aa14.05□□□□□ -0.16
SEC22C-205ENST00000417572 DPP3Q9NY33 737 aa14.05□□□□□ -0.16
SEC22C-205ENST00000417572 TUBGCP4Q9UGJ1 667 aa14.05□□□□□ -0.16
SEC22C-205ENST00000417572 PES1O00541 588 aaKnown RBP14.04□□□□□ -0.16
SEC22C-205ENST00000417572 XPOTO43592 962 aaKnown RBP14.04□□□□□ -0.16
SEC22C-205ENST00000417572 CST3P01034 146 aaPredicted RBP14.04□□□□□ -0.16
SEC22C-205ENST00000417572 TPM2P07951 284 aa14.04□□□□□ -0.16
SEC22C-205ENST00000417572 CYP3A5P20815 502 aa14.04□□□□□ -0.16
SEC22C-205ENST00000417572 HTRA4P83105 476 aaPredicted RBP14.04□□□□□ -0.16
SEC22C-205ENST00000417572 RNASELQ05823 741 aaKnown RBP14.04□□□□□ -0.16
SEC22C-205ENST00000417572 UVSSAQ2YD98 709 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms