RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 ENOX2Q16206 610 aaKnown RBP9.17□□□□□ -0.94
TRIM48-201ENST00000417545 FILIP1LQ4L180 1135 aa9.17□□□□□ -0.94
TRIM48-201ENST00000417545 JADE1Q6IE81 842 aa9.17□□□□□ -0.94
TRIM48-201ENST00000417545 AGMOQ6ZNB7 445 aa9.17□□□□□ -0.94
TRIM48-201ENST00000417545 LRRC55Q6ZSA7 311 aa9.17□□□□□ -0.94
TRIM48-201ENST00000417545 C16orf59Q7L2K0 433 aa9.17□□□□□ -0.94
TRIM48-201ENST00000417545 FRMD5Q7Z6J6 570 aa9.17□□□□□ -0.94
TRIM48-201ENST00000417545 LUZP1Q86V48 1076 aa9.17□□□□□ -0.94
TRIM48-201ENST00000417545 HERC6Q8IVU3 1022 aa9.17□□□□□ -0.94
TRIM48-201ENST00000417545 LRRC43Q8N309 656 aa9.17□□□□□ -0.94
TRIM48-201ENST00000417545 CCDC150Q8NCX0 1101 aa9.17□□□□□ -0.94
TRIM48-201ENST00000417545 ZSWIM2Q8NEG5 633 aa9.17□□□□□ -0.94
TRIM48-201ENST00000417545 PHOSPHO2Q8TCD6 241 aa9.17□□□□□ -0.94
TRIM48-201ENST00000417545 TOP1MTQ969P6 601 aa9.17□□□□□ -0.94
TRIM48-201ENST00000417545 CGRRF1Q99675 332 aa9.17□□□□□ -0.94
TRIM48-201ENST00000417545 PDE11AQ9HCR9 933 aa9.17□□□□□ -0.94
TRIM48-201ENST00000417545 FANCLQ9NW38 375 aa9.17□□□□□ -0.94
TRIM48-201ENST00000417545 DMAC2Q9NW81 257 aa9.17□□□□□ -0.94
TRIM48-201ENST00000417545 UBQLN1Q9UMX0 589 aaKnown RBP9.17□□□□□ -0.94
TRIM48-201ENST00000417545 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.17□□□□□ -0.94
TRIM48-201ENST00000417545 TTC3P53804 2025 aa9.17□□□□□ -0.94
TRIM48-201ENST00000417545 FNDC1Q4ZHG4 1894 aaPredicted RBP9.16□□□□□ -0.94
TRIM48-201ENST00000417545 MEIS3P2A8K0S8 358 aa9.16□□□□□ -0.94
TRIM48-201ENST00000417545 RBAK-RBAKDNI3L0D1 243 aa9.16□□□□□ -0.94
TRIM48-201ENST00000417545 ZC3H11AO75152 810 aaKnown RBP eCLIP9.16□□□□□ -0.94
TRIM48-201ENST00000417545 TPM3P06753 285 aa9.16□□□□□ -0.94
TRIM48-201ENST00000417545 TRIM49P0CI25 452 aa9.16□□□□□ -0.94
TRIM48-201ENST00000417545 TRIM49CP0CI26 452 aa9.16□□□□□ -0.94
TRIM48-201ENST00000417545 ATF7P17544 494 aaPredicted RBP9.16□□□□□ -0.94
TRIM48-201ENST00000417545 AP3M2P53677 418 aa9.16□□□□□ -0.94
TRIM48-201ENST00000417545 TRPC3Q13507 836 aa9.16□□□□□ -0.94
TRIM48-201ENST00000417545 DUOXA2Q1HG44 320 aa9.16□□□□□ -0.94
TRIM48-201ENST00000417545 SLC10A6Q3KNW5 377 aa9.16□□□□□ -0.94
TRIM48-201ENST00000417545 C9orf50Q5SZB4 431 aa9.16□□□□□ -0.94
TRIM48-201ENST00000417545 FKBP15Q5T1M5 1219 aa9.16□□□□□ -0.94
TRIM48-201ENST00000417545 LMBRD2Q68DH5 695 aaPredicted RBP9.16□□□□□ -0.94
TRIM48-201ENST00000417545 CRELD2Q6UXH1 353 aaPredicted RBP9.16□□□□□ -0.94
TRIM48-201ENST00000417545 TMCO2Q7Z6W1 182 aaPredicted RBP9.16□□□□□ -0.94
TRIM48-201ENST00000417545 ZNF598Q86UK7 904 aaKnown RBP9.16□□□□□ -0.94
TRIM48-201ENST00000417545 NT5DC4Q86YG4 428 aa9.16□□□□□ -0.94
TRIM48-201ENST00000417545 WDR49Q8IV35 697 aa9.16□□□□□ -0.94
TRIM48-201ENST00000417545 TDHQ8IZJ6 230 aa9.16□□□□□ -0.94
TRIM48-201ENST00000417545 FIBCD1Q8N539 461 aa9.16□□□□□ -0.94
TRIM48-201ENST00000417545 TMC2Q8TDI7 906 aa9.16□□□□□ -0.94
TRIM48-201ENST00000417545 FBXL18Q96ME1 805 aa9.16□□□□□ -0.94
TRIM48-201ENST00000417545 PCMTD1Q96MG8 357 aaPredicted RBP9.16□□□□□ -0.94
TRIM48-201ENST00000417545 ZFP42Q96MM3 310 aa9.16□□□□□ -0.94
TRIM48-201ENST00000417545 TSPAN18Q96SJ8 248 aa9.16□□□□□ -0.94
TRIM48-201ENST00000417545 GDF15Q99988 308 aa9.16□□□□□ -0.94
TRIM48-201ENST00000417545 IMPG2Q9BZV3 1241 aa9.16□□□□□ -0.94
TRIM48-201ENST00000417545 AAASQ9NRG9 546 aa9.16□□□□□ -0.94
TRIM48-201ENST00000417545 SAMSN1Q9NSI8 373 aaKnown RBP9.16□□□□□ -0.94
TRIM48-201ENST00000417545 CXXC1Q9P0U4 656 aaPredicted RBP9.16□□□□□ -0.94
TRIM48-201ENST00000417545 CNTN3Q9P232 1028 aa9.16□□□□□ -0.94
TRIM48-201ENST00000417545 MSRAQ9UJ68 235 aa9.16□□□□□ -0.94
TRIM48-201ENST00000417545 DERAQ9Y315 318 aa9.16□□□□□ -0.94
TRIM48-201ENST00000417545 INSL6Q9Y581 213 aa9.16□□□□□ -0.94
TRIM48-201ENST00000417545 PTPRSQ13332 1948 aa9.16□□□□□ -0.94
TRIM48-201ENST00000417545 SMIM28A0A1B0GU29 152 aa9.15□□□□□ -0.94
TRIM48-201ENST00000417545 TTC26A0AVF1 554 aa9.15□□□□□ -0.94
TRIM48-201ENST00000417545 CARNS1A5YM72 827 aa9.15□□□□□ -0.94
TRIM48-201ENST00000417545 LRRIQ3A6PVS8 624 aaPredicted RBP9.15□□□□□ -0.94
TRIM48-201ENST00000417545 OFD1O75665 1012 aa9.15□□□□□ -0.94
TRIM48-201ENST00000417545 GJB5O95377 273 aa9.15□□□□□ -0.94
TRIM48-201ENST00000417545 AFPP02771 609 aaKnown RBP9.15□□□□□ -0.94
TRIM48-201ENST00000417545 NFICP08651 508 aa9.15□□□□□ -0.94
TRIM48-201ENST00000417545 KCNE1P15382 129 aa9.15□□□□□ -0.94
TRIM48-201ENST00000417545 PIK3CAP42336 1068 aa9.15□□□□□ -0.94
TRIM48-201ENST00000417545 OR1G1P47890 313 aa9.15□□□□□ -0.94
TRIM48-201ENST00000417545 GATMP50440 423 aa9.15□□□□□ -0.94
TRIM48-201ENST00000417545 MXI1P50539 228 aa9.15□□□□□ -0.94
TRIM48-201ENST00000417545 MYL7Q01449 175 aa9.15□□□□□ -0.94
TRIM48-201ENST00000417545 RAB30Q15771 203 aa9.15□□□□□ -0.94
TRIM48-201ENST00000417545 MAN2A1Q16706 1144 aa9.15□□□□□ -0.94
TRIM48-201ENST00000417545 TCP11X2Q5H9J9 407 aa9.15□□□□□ -0.94
TRIM48-201ENST00000417545 CLLU1OSQ5K130 101 aa9.15□□□□□ -0.94
TRIM48-201ENST00000417545 DHX40Q8IX18 779 aaKnown RBP9.15□□□□□ -0.94
TRIM48-201ENST00000417545 ZC3H3Q8IXZ2 948 aaKnown RBP9.15□□□□□ -0.94
TRIM48-201ENST00000417545 CMTR2Q8IYT2 770 aaKnown RBP9.15□□□□□ -0.94
TRIM48-201ENST00000417545 TMEM174Q8WUU8 243 aa9.15□□□□□ -0.94
TRIM48-201ENST00000417545 MFSD14AQ96MC6 490 aa9.15□□□□□ -0.94
TRIM48-201ENST00000417545 ZNF560Q96MR9 790 aa9.15□□□□□ -0.94
TRIM48-201ENST00000417545 RAD9AQ99638 391 aa9.15□□□□□ -0.94
TRIM48-201ENST00000417545 TUBGCP2Q9BSJ2 902 aa9.15□□□□□ -0.94
TRIM48-201ENST00000417545 MTMR12Q9C0I1 747 aa9.15□□□□□ -0.94
TRIM48-201ENST00000417545 SCUBE2Q9NQ36 999 aa9.15□□□□□ -0.94
TRIM48-201ENST00000417545 RNF19AQ9NV58 838 aa9.15□□□□□ -0.94
TRIM48-201ENST00000417545 TAB2Q9NYJ8 693 aa9.15□□□□□ -0.94
TRIM48-201ENST00000417545 C2CD2Q9Y426 696 aa9.15□□□□□ -0.94
TRIM48-201ENST00000417545 NUB1Q9Y5A7 615 aa9.15□□□□□ -0.94
TRIM48-201ENST00000417545 GBF1Q92538 1859 aa9.15□□□□□ -0.94
TRIM48-201ENST00000417545 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.14□□□□□ -0.95
TRIM48-201ENST00000417545 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.14□□□□□ -0.95
TRIM48-201ENST00000417545 CASTOR2A6NHX0 329 aa9.14□□□□□ -0.95
TRIM48-201ENST00000417545 CBFA2T2O43439 604 aa9.14□□□□□ -0.95
TRIM48-201ENST00000417545 FAM189A1O60320 539 aa9.14□□□□□ -0.95
TRIM48-201ENST00000417545 DGKIO75912 1065 aa9.14□□□□□ -0.95
TRIM48-201ENST00000417545 ITGB3P05106 788 aa9.14□□□□□ -0.95
TRIM48-201ENST00000417545 LAG3P18627 525 aa9.14□□□□□ -0.95
TRIM48-201ENST00000417545 BMP8BP34820 402 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms