RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 UBA7P41226 1012 aa20.18■□□□□ 0.82
VPS16-204ENST00000417508 CLCNKBP51801 687 aa20.18■□□□□ 0.82
VPS16-204ENST00000417508 RAB33AQ14088 237 aa20.18■□□□□ 0.82
VPS16-204ENST00000417508 UVSSAQ2YD98 709 aa20.18■□□□□ 0.82
VPS16-204ENST00000417508 ZPBP2Q6X784 338 aa20.18■□□□□ 0.82
VPS16-204ENST00000417508 TMEM161BQ8NDZ6 487 aa20.18■□□□□ 0.82
VPS16-204ENST00000417508 ZFP37Q9Y6Q3 630 aaPredicted RBP20.18■□□□□ 0.82
VPS16-204ENST00000417508 DOCK8Q8NF50 2099 aa20.18■□□□□ 0.82
VPS16-204ENST00000417508 ABLIM1O14639 778 aa20.17■□□□□ 0.82
VPS16-204ENST00000417508 PDCP20941 246 aa20.17■□□□□ 0.82
VPS16-204ENST00000417508 RPL9P32969 192 aaKnown RBP20.17■□□□□ 0.82
VPS16-204ENST00000417508 LONP1P36776 959 aaKnown RBP20.17■□□□□ 0.82
VPS16-204ENST00000417508 GLRA4Q5JXX5 417 aa20.17■□□□□ 0.82
VPS16-204ENST00000417508 LIN9Q5TKA1 542 aa20.17■□□□□ 0.82
VPS16-204ENST00000417508 ANKS3Q6ZW76 656 aa20.17■□□□□ 0.82
VPS16-204ENST00000417508 PLIN2Q99541 437 aa20.17■□□□□ 0.82
VPS16-204ENST00000417508 ODF2LQ9ULJ1 636 aa20.17■□□□□ 0.82
VPS16-204ENST00000417508 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.17■□□□□ 0.82
VPS16-204ENST00000417508 BACE2Q9Y5Z0 518 aa20.17■□□□□ 0.82
VPS16-204ENST00000417508 VWA8A3KMH1 1905 aa20.17■□□□□ 0.82
VPS16-204ENST00000417508 KMT2EQ8IZD2 1858 aa20.16■□□□□ 0.82
VPS16-204ENST00000417508 MYBP10242 640 aa20.16■□□□□ 0.82
VPS16-204ENST00000417508 MAPTP10636 758 aaKnown RBP20.16■□□□□ 0.82
VPS16-204ENST00000417508 VCPP55072 806 aaKnown RBP20.16■□□□□ 0.82
VPS16-204ENST00000417508 OSTNP61366 133 aa20.16■□□□□ 0.82
VPS16-204ENST00000417508 RAD51AP2Q09MP3 1159 aa20.16■□□□□ 0.82
VPS16-204ENST00000417508 CUL4AQ13619 759 aa20.16■□□□□ 0.82
VPS16-204ENST00000417508 CD300LGQ6UXG3 332 aa20.16■□□□□ 0.82
VPS16-204ENST00000417508 ALYREFQ86V81 257 aaKnown RBP20.16■□□□□ 0.82
VPS16-204ENST00000417508 CEP120Q8N960 986 aa20.16■□□□□ 0.82
VPS16-204ENST00000417508 PRSS33Q8NF86 280 aa20.16■□□□□ 0.82
VPS16-204ENST00000417508 SNX27Q96L92 541 aa20.16■□□□□ 0.82
VPS16-204ENST00000417508 CNTN3Q9P232 1028 aa20.16■□□□□ 0.82
VPS16-204ENST00000417508 MTRRQ9UBK8 725 aa20.16■□□□□ 0.82
VPS16-204ENST00000417508 DUSP12Q9UNI6 340 aa20.16■□□□□ 0.82
VPS16-204ENST00000417508 CLDN3O15551 220 aa20.15■□□□□ 0.82
VPS16-204ENST00000417508 N4BP1O75113 896 aaKnown RBP20.15■□□□□ 0.82
VPS16-204ENST00000417508 XYLBO75191 536 aa20.15■□□□□ 0.82
VPS16-204ENST00000417508 PDGFBP01127 241 aaPredicted RBP20.15■□□□□ 0.82
VPS16-204ENST00000417508 POU2F2P09086 479 aa20.15■□□□□ 0.82
VPS16-204ENST00000417508 ABCD1P33897 745 aa20.15■□□□□ 0.82
VPS16-204ENST00000417508 OR1D2P34982 312 aa20.15■□□□□ 0.82
VPS16-204ENST00000417508 CLCN5P51795 746 aa20.15■□□□□ 0.82
VPS16-204ENST00000417508 NOLC1Q14978 699 aaKnown RBP eCLIP20.15■□□□□ 0.82
VPS16-204ENST00000417508 KYAT1Q16773 422 aa20.15■□□□□ 0.82
VPS16-204ENST00000417508 ARSHQ5FYA8 562 aa20.15■□□□□ 0.82
VPS16-204ENST00000417508 PPM1LQ5SGD2 360 aa20.15■□□□□ 0.82
VPS16-204ENST00000417508 MFSD1Q9H3U5 465 aa20.15■□□□□ 0.82
VPS16-204ENST00000417508 PLEKHA5Q9HAU0 1116 aa20.15■□□□□ 0.82
VPS16-204ENST00000417508 DOCK6Q96HP0 2047 aa20.15■□□□□ 0.82
VPS16-204ENST00000417508 LAMP2P13473 410 aa20.14■□□□□ 0.81
VPS16-204ENST00000417508 NCKAP1LP55160 1127 aa20.14■□□□□ 0.81
VPS16-204ENST00000417508 MCL1Q07820 350 aa20.14■□□□□ 0.81
VPS16-204ENST00000417508 ASTLQ6HA08 431 aaPredicted RBP20.14■□□□□ 0.81
VPS16-204ENST00000417508 ZBTB45Q96K62 511 aaPredicted RBP20.14■□□□□ 0.81
VPS16-204ENST00000417508 MYADMQ96S97 322 aa20.14■□□□□ 0.81
VPS16-204ENST00000417508 SMOC2Q9H3U7 446 aa20.14■□□□□ 0.81
VPS16-204ENST00000417508 WNT16Q9UBV4 365 aa20.14■□□□□ 0.81
VPS16-204ENST00000417508 PODXLO00592 558 aa20.13■□□□□ 0.81
VPS16-204ENST00000417508 SYN3O14994 580 aa20.13■□□□□ 0.81
VPS16-204ENST00000417508 C8AP07357 584 aa20.13■□□□□ 0.81
VPS16-204ENST00000417508 MRE11P49959 708 aa20.13■□□□□ 0.81
VPS16-204ENST00000417508 SOX4Q06945 474 aaPredicted RBP20.13■□□□□ 0.81
VPS16-204ENST00000417508 TCF15Q12870 199 aa20.13■□□□□ 0.81
VPS16-204ENST00000417508 SF3A1Q15459 793 aaKnown RBP20.13■□□□□ 0.81
VPS16-204ENST00000417508 AXDND1Q5T1B0 1012 aaPredicted RBP20.13■□□□□ 0.81
VPS16-204ENST00000417508 HAUS6Q7Z4H7 955 aa20.13■□□□□ 0.81
VPS16-204ENST00000417508 SLC44A3Q8N4M1 653 aa20.13■□□□□ 0.81
VPS16-204ENST00000417508 ZMAT2Q96NC0 199 aaKnown RBP20.13■□□□□ 0.81
VPS16-204ENST00000417508 TSPAN18Q96SJ8 248 aa20.13■□□□□ 0.81
VPS16-204ENST00000417508 GOLGA2P5Q9HBQ8 144 aa20.13■□□□□ 0.81
VPS16-204ENST00000417508 H7C4K7 107 aa20.12■□□□□ 0.81
VPS16-204ENST00000417508 ADAM12O43184 909 aa20.12■□□□□ 0.81
VPS16-204ENST00000417508 CLTAP09496 248 aa20.12■□□□□ 0.81
VPS16-204ENST00000417508 FSHRP23945 695 aa20.12■□□□□ 0.81
VPS16-204ENST00000417508 TKTP29401 623 aaKnown RBP20.12■□□□□ 0.81
VPS16-204ENST00000417508 ZNF131P52739 623 aa20.12■□□□□ 0.81
VPS16-204ENST00000417508 SLC10A6Q3KNW5 377 aa20.12■□□□□ 0.81
VPS16-204ENST00000417508 GPBP1Q86WP2 473 aa20.12■□□□□ 0.81
VPS16-204ENST00000417508 C3orf58Q8NDZ4 430 aa20.12■□□□□ 0.81
VPS16-204ENST00000417508 ZNF461Q8TAF7 563 aa20.12■□□□□ 0.81
VPS16-204ENST00000417508 CCSER1Q9C0I3 900 aa20.12■□□□□ 0.81
VPS16-204ENST00000417508 PARVGQ9HBI0 331 aa20.12■□□□□ 0.81
VPS16-204ENST00000417508 BLOC1S4Q9NUP1 217 aa20.12■□□□□ 0.81
VPS16-204ENST00000417508 ANKFY1Q9P2R3 1169 aa20.12■□□□□ 0.81
VPS16-204ENST00000417508 FBXL21Q9UKT6 434 aa20.12■□□□□ 0.81
VPS16-204ENST00000417508 NUB1Q9Y5A7 615 aa20.12■□□□□ 0.81
VPS16-204ENST00000417508 CDY1Q9Y6F8 540 aa20.12■□□□□ 0.81
VPS16-204ENST00000417508 NPHP3-ACAD11A0A0J9YXS1 232 aa20.11■□□□□ 0.81
VPS16-204ENST00000417508 ANHXE9PGG2 379 aa20.11■□□□□ 0.81
VPS16-204ENST00000417508 GALR2O43603 387 aaPredicted RBP20.11■□□□□ 0.81
VPS16-204ENST00000417508 HARSP12081 509 aaKnown RBP20.11■□□□□ 0.81
VPS16-204ENST00000417508 IGFBP6P24592 240 aaPredicted RBP20.11■□□□□ 0.81
VPS16-204ENST00000417508 DDIT3P35638 169 aa20.11■□□□□ 0.81
VPS16-204ENST00000417508 MATR3P43243 847 aaKnown RBP eCLIP20.11■□□□□ 0.81
VPS16-204ENST00000417508 BRCC3P46736 316 aa20.11■□□□□ 0.81
VPS16-204ENST00000417508 SLC8B1Q6J4K2 584 aa20.11■□□□□ 0.81
VPS16-204ENST00000417508 GRASPQ7Z6J2 395 aaPredicted RBP20.11■□□□□ 0.81
VPS16-204ENST00000417508 MYCT1Q8N699 235 aa20.11■□□□□ 0.81
VPS16-204ENST00000417508 RASSF8Q8NHQ8 419 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms