RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 DNAJC12Q9UKB3 198 aa11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 SYNGAP1Q96PV0 1343 aa11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 BTKQ06187 659 aa11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 PID1Q7Z2X4 250 aa11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 RNF180Q86T96 592 aa11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 ADGRF4Q8IZF3 695 aa11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 ICA1LQ8NDH6 482 aa11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 EXO5Q9H790 373 aa11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 IP6K2Q9UHH9 426 aa11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 PREX2Q70Z35 1606 aa11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 PHLPP2Q6ZVD8 1323 aa11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 IGFBP4P22692 258 aa11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 RGS7P49802 495 aa11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 ATN1P54259 1190 aaPredicted RBP11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 C10orf120Q5SQS8 335 aa11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 IYDQ6PHW0 289 aa11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 BRINP3Q76B58 766 aa11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 PHACTR4Q8IZ21 702 aa11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 SPATA18Q8TC71 538 aa11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 ZNF560Q96MR9 790 aa11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 ZFP69BQ9UJL9 534 aa11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 H0Y3Z8 333 aa11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 ZBTB5O15062 677 aa11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 PRPF3O43395 683 aaKnown RBP11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 BRAFP15056 766 aa11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 ADCY2Q08462 1091 aa11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 CDH18Q13634 790 aa11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 PPP4R3CPQ6ZMV5 832 aa11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 MRPL40Q9NQ50 206 aaKnown RBP11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 HMGB3O15347 200 aaKnown RBP11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 RNASEH1O60930 286 aaKnown RBP11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 KRT38O76015 456 aa11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 LARGE1O95461 756 aa11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 KIF23Q02241 960 aaPredicted RBP11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 NR1H3Q13133 447 aa11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 FAM162AQ96A26 154 aa11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 GJB4Q9NTQ9 266 aa11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 COPG1Q9Y678 874 aaKnown RBP11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 CEP95Q96GE4 821 aa11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 TNIP3Q96KP6 325 aa11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 SPACA7Q96KW9 195 aa11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 AGBL1Q96MI9 1066 aa11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 DEPDC7Q96QD5 511 aa11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 MINPP1Q9UNW1 487 aa11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 TCHHQ07283 1943 aa11.82□□□□□ -0.52
PRPF40A-202ENST00000410080 YWHABP31946 246 aaKnown RBP11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 KPNA1P52294 538 aaPredicted RBP11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 CAMKK1Q8N5S9 505 aa11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 C11orf70Q9BRQ4 267 aa11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 ADGRL3Q9HAR2 1447 aa11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 hCG_1984214I3L0E3 225 aa11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 ITGA4P13612 1032 aa11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 CDC16Q13042 620 aa11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 KCNB1Q14721 858 aa11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 TMEM132DQ14C87 1099 aa11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 ZNF713Q8N859 430 aaPredicted RBP11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 EXD1Q8NHP7 514 aa11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 ASZ1Q8WWH4 475 aa11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 PNKPQ96T60 521 aa11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 TRIM8Q9BZR9 551 aa11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 SENP2Q9HC62 589 aa11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 GPR108Q9NPR9 543 aa11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 CNOT7Q9UIV1 285 aaKnown RBP11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 ASB14A6NK59 587 aa11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 DYNC1LI2O43237 492 aaPredicted RBP11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 CAPN1P07384 714 aa11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 PARK7Q99497 189 aaKnown RBP11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 CNOT10Q9H9A5 744 aaKnown RBP11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 PSD3Q9NYI0 1048 aa11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 AGO2Q9UKV8 859 aaKnown RBP11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 CEP152O94986 1710 aa11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 CPDO75976 1380 aa11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 ANGPT2O15123 496 aa11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 LZTS3O60299 673 aaPredicted RBP11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 ENO2P09104 434 aaPredicted RBP11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 PSMA3P25788 255 aa11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 CASP1P29466 404 aa11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 CPT1AP50416 773 aa11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 CYB5R4Q7L1T6 521 aa11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 CCDC3Q9BQI4 270 aa11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 APPL1Q9UKG1 709 aa11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 EIF4E1BA6NMX2 242 aaKnown RBP11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 RASSF9O75901 435 aa11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 FKBP9O95302 570 aa11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 ZFXP17010 805 aaPredicted RBP11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 CHI3L1P36222 383 aaPredicted RBP11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 NEK2P51955 445 aa11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 TCEA2Q15560 299 aa11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 C6orf10Q5SRN2 563 aa11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 PRAMEF18Q5VWM3 479 aa11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 FKBP9P1Q75LS8 142 aa11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 TRIM69Q86WT6 500 aa11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 XXYLT1Q8NBI6 393 aa11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 ZNF564Q8TBZ8 553 aaPredicted RBP11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 CYGBQ8WWM9 190 aa11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 TMA16Q96EY4 203 aaKnown RBP11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 BRIP1Q9BX63 1249 aa11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 NFU1Q9UMS0 254 aa11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 KIF20BQ96Q89 1820 aa11.81□□□□□ -0.52
PRPF40A-202ENST00000410080 ERVK-7P63135 1459 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms