RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 ALPK3Q96L96 1907 aa6.06□□□□□ -1.44
CLK1-202ENST00000409403 COL3A1P02461 1466 aaPredicted RBP6.06□□□□□ -1.44
CLK1-202ENST00000409403 TCRBV5S4A2TA0A5A2 114 aa6.06□□□□□ -1.44
CLK1-202ENST00000409403 VPS37CA5D8V6 355 aaPredicted RBP6.06□□□□□ -1.44
CLK1-202ENST00000409403 MAFKO60675 156 aa6.06□□□□□ -1.44
CLK1-202ENST00000409403 ADAMTS4O75173 837 aa6.06□□□□□ -1.44
CLK1-202ENST00000409403 CHMLP26374 656 aa6.06□□□□□ -1.44
CLK1-202ENST00000409403 ARL4AP40617 200 aa6.06□□□□□ -1.44
CLK1-202ENST00000409403 SLC6A11P48066 632 aa6.06□□□□□ -1.44
CLK1-202ENST00000409403 KPNA1P52294 538 aaPredicted RBP6.06□□□□□ -1.44
CLK1-202ENST00000409403 TRAF1Q13077 416 aa6.06□□□□□ -1.44
CLK1-202ENST00000409403 RBBP5Q15291 538 aaKnown RBP6.06□□□□□ -1.44
CLK1-202ENST00000409403 ANKRD1Q15327 319 aa6.06□□□□□ -1.44
CLK1-202ENST00000409403 PDCD2Q16342 344 aaPredicted RBP6.06□□□□□ -1.44
CLK1-202ENST00000409403 PREPLQ4J6C6 727 aaPredicted RBP6.06□□□□□ -1.44
CLK1-202ENST00000409403 VPS53Q5VIR6 699 aa6.06□□□□□ -1.44
CLK1-202ENST00000409403 CEP85Q6P2H3 762 aa6.06□□□□□ -1.44
CLK1-202ENST00000409403 CCDC73Q6ZRK6 1079 aa6.06□□□□□ -1.44
CLK1-202ENST00000409403 PTRH1Q86Y79 214 aaKnown RBP6.06□□□□□ -1.44
CLK1-202ENST00000409403 OTUD6BQ8N6M0 293 aa6.06□□□□□ -1.44
CLK1-202ENST00000409403 TTC14Q96N46 770 aa6.06□□□□□ -1.44
CLK1-202ENST00000409403 THUMPD2Q9BTF0 503 aaKnown RBP6.06□□□□□ -1.44
CLK1-202ENST00000409403 TM6SF1Q9BZW5 370 aa6.06□□□□□ -1.44
CLK1-202ENST00000409403 PDE11AQ9HCR9 933 aa6.06□□□□□ -1.44
CLK1-202ENST00000409403 ZCCHC17Q9NP64 241 aaKnown RBP6.06□□□□□ -1.44
CLK1-202ENST00000409403 CFAP45Q9UL16 551 aa6.06□□□□□ -1.44
CLK1-202ENST00000409403 RAB21Q9UL25 225 aa6.06□□□□□ -1.44
CLK1-202ENST00000409403 SRPK3Q9UPE1 567 aa6.06□□□□□ -1.44
CLK1-202ENST00000409403 NUB1Q9Y5A7 615 aa6.06□□□□□ -1.44
CLK1-202ENST00000409403 MRFAP1Q9Y605 127 aa6.06□□□□□ -1.44
CLK1-202ENST00000409403 ANKRD18BA2A2Z9 1011 aa6.05□□□□□ -1.44
CLK1-202ENST00000409403 ARHGAP6O43182 974 aa6.05□□□□□ -1.44
CLK1-202ENST00000409403 NEBLO76041 1014 aa6.05□□□□□ -1.44
CLK1-202ENST00000409403 GLI4P10075 376 aa6.05□□□□□ -1.44
CLK1-202ENST00000409403 EZRP15311 586 aaKnown RBP6.05□□□□□ -1.44
CLK1-202ENST00000409403 TRHRP34981 398 aaPredicted RBP6.05□□□□□ -1.44
CLK1-202ENST00000409403 AARSP49588 968 aaKnown RBP eCLIP6.05□□□□□ -1.44
CLK1-202ENST00000409403 HUNKP57058 714 aa6.05□□□□□ -1.44
CLK1-202ENST00000409403 RWDD2BP57060 319 aa6.05□□□□□ -1.44
CLK1-202ENST00000409403 IRF9Q00978 393 aa6.05□□□□□ -1.44
CLK1-202ENST00000409403 ADCY2Q08462 1091 aa6.05□□□□□ -1.44
CLK1-202ENST00000409403 DRP2Q13474 957 aa6.05□□□□□ -1.44
CLK1-202ENST00000409403 CAMK4Q16566 473 aa6.05□□□□□ -1.44
CLK1-202ENST00000409403 ZNF792Q3KQV3 632 aa6.05□□□□□ -1.44
CLK1-202ENST00000409403 ATP13A4Q4VNC1 1196 aa6.05□□□□□ -1.44
CLK1-202ENST00000409403 FIGNQ5HY92 759 aa6.05□□□□□ -1.44
CLK1-202ENST00000409403 EMC4Q5J8M3 183 aa6.05□□□□□ -1.44
CLK1-202ENST00000409403 STEAP3Q658P3 488 aa6.05□□□□□ -1.44
CLK1-202ENST00000409403 DCP2Q8IU60 420 aaKnown RBP6.05□□□□□ -1.44
CLK1-202ENST00000409403 NETO2Q8NC67 525 aa6.05□□□□□ -1.44
CLK1-202ENST00000409403 MSANTD4Q8NCY6 345 aa6.05□□□□□ -1.44
CLK1-202ENST00000409403 UHMK1Q8TAS1 419 aaKnown RBP6.05□□□□□ -1.44
CLK1-202ENST00000409403 MAGEC3Q8TD91 643 aa6.05□□□□□ -1.44
CLK1-202ENST00000409403 N4BP2L2Q92802 583 aaPredicted RBP6.05□□□□□ -1.44
CLK1-202ENST00000409403 PSMD1Q99460 953 aa6.05□□□□□ -1.44
CLK1-202ENST00000409403 P2RX7Q99572 595 aaKnown RBP6.05□□□□□ -1.44
CLK1-202ENST00000409403 TEX13AQ9BXU3 409 aaPredicted RBP6.05□□□□□ -1.44
CLK1-202ENST00000409403 UPF3BQ9BZI7 483 aaKnown RBP6.05□□□□□ -1.44
CLK1-202ENST00000409403 C14orf93Q9H972 538 aaKnown RBP6.05□□□□□ -1.44
CLK1-202ENST00000409403 EMC7Q9NPA0 242 aa6.05□□□□□ -1.44
CLK1-202ENST00000409403 CRTAC1Q9NQ79 661 aa6.05□□□□□ -1.44
CLK1-202ENST00000409403 BATF3Q9NR55 127 aa6.05□□□□□ -1.44
CLK1-202ENST00000409403 OXSMQ9NWU1 459 aa6.05□□□□□ -1.44
CLK1-202ENST00000409403 ETAA1Q9NY74 926 aa6.05□□□□□ -1.44
CLK1-202ENST00000409403 CPSF2Q9P2I0 782 aaKnown RBP6.05□□□□□ -1.44
CLK1-202ENST00000409403 SRP68Q9UHB9 627 aaKnown RBP6.05□□□□□ -1.44
CLK1-202ENST00000409403 MYO6Q9UM54 1294 aa6.05□□□□□ -1.44
CLK1-202ENST00000409403 CTNND2Q9UQB3 1225 aa6.05□□□□□ -1.44
CLK1-202ENST00000409403 FAN1Q9Y2M0 1017 aa6.05□□□□□ -1.44
CLK1-202ENST00000409403 SH3BP1Q9Y3L3 701 aa6.05□□□□□ -1.44
CLK1-202ENST00000409403 USP16Q9Y5T5 823 aa6.05□□□□□ -1.44
CLK1-202ENST00000409403 MUC6Q6W4X9 2439 aa6.05□□□□□ -1.44
CLK1-202ENST00000409403 SCO2A0A1W2PP80 73 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 H7C1D1 291 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 POLRMTO00411 1230 aaKnown RBP6.04□□□□□ -1.44
CLK1-202ENST00000409403 MAN2B1O00754 1011 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 HGSO14964 777 aaPredicted RBP6.04□□□□□ -1.44
CLK1-202ENST00000409403 KINO60870 393 aaKnown RBP6.04□□□□□ -1.44
CLK1-202ENST00000409403 SHOX2O60902 331 aaPredicted RBP6.04□□□□□ -1.44
CLK1-202ENST00000409403 KATNA1O75449 491 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 KRT37O76014 449 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 FSBPO95073 299 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 PNLIPP16233 465 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 SLC8A1P32418 973 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 CDR1P51861 262 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 SLC8A3P57103 927 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 SLMAPQ14BN4 828 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 ODR4Q5SWX8 454 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 BEND6Q5SZJ8 279 aaPredicted RBP6.04□□□□□ -1.44
CLK1-202ENST00000409403 CREB3L3Q68CJ9 461 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 TMED8Q6PL24 325 aaPredicted RBP6.04□□□□□ -1.44
CLK1-202ENST00000409403 SRGAP1Q7Z6B7 1085 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 CCAR1Q8IX12 1150 aaKnown RBP6.04□□□□□ -1.44
CLK1-202ENST00000409403 NLGN4XQ8N0W4 816 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 EFHBQ8N7U6 833 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 SH3RF2Q8TEC5 729 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 RUFY2Q8WXA3 655 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 SHISA4Q96DD7 197 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 SCYL1Q96KG9 808 aa6.04□□□□□ -1.44
CLK1-202ENST00000409403 GUCD1Q96NT3 240 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms