RNA–Protein interactions for RNA: ENST00000409022.2

PTPN18-203, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-203ENST00000409022 CLCNKBP51801 687 aa20.22■□□□□ 0.83
PTPN18-203ENST00000409022 UPP1Q16831 310 aa20.22■□□□□ 0.83
PTPN18-203ENST00000409022 SPECC1Q5M775 1068 aa20.22■□□□□ 0.83
PTPN18-203ENST00000409022 RTP2Q5QGT7 225 aa20.22■□□□□ 0.83
PTPN18-203ENST00000409022 OTOP3Q7RTS5 596 aa20.22■□□□□ 0.83
PTPN18-203ENST00000409022 PALB2Q86YC2 1186 aa20.22■□□□□ 0.83
PTPN18-203ENST00000409022 ZDHHC7Q9NXF8 308 aa20.22■□□□□ 0.83
PTPN18-203ENST00000409022 CACNG4Q9UBN1 327 aa20.22■□□□□ 0.83
PTPN18-203ENST00000409022 TGM5O43548 720 aa20.21■□□□□ 0.83
PTPN18-203ENST00000409022 XPOTO43592 962 aaKnown RBP20.21■□□□□ 0.83
PTPN18-203ENST00000409022 PIGRP01833 764 aa20.21■□□□□ 0.83
PTPN18-203ENST00000409022 WEE2P0C1S8 567 aa20.21■□□□□ 0.83
PTPN18-203ENST00000409022 SP100P23497 879 aaPredicted RBP20.21■□□□□ 0.83
PTPN18-203ENST00000409022 STAT6P42226 847 aa20.21■□□□□ 0.83
PTPN18-203ENST00000409022 NASPP49321 788 aaPredicted RBP20.21■□□□□ 0.83
PTPN18-203ENST00000409022 PTPN21Q16825 1174 aa20.21■□□□□ 0.83
PTPN18-203ENST00000409022 LIN9Q5TKA1 542 aa20.21■□□□□ 0.83
PTPN18-203ENST00000409022 ZBTB45Q96K62 511 aaPredicted RBP20.21■□□□□ 0.83
PTPN18-203ENST00000409022 CLIC6Q96NY7 704 aa20.21■□□□□ 0.83
PTPN18-203ENST00000409022 TSPAN18Q96SJ8 248 aa20.21■□□□□ 0.83
PTPN18-203ENST00000409022 PIDD1Q9HB75 910 aa20.21■□□□□ 0.83
PTPN18-203ENST00000409022 C11orf16Q9NQ32 467 aa20.21■□□□□ 0.83
PTPN18-203ENST00000409022 SEL1LQ9UBV2 794 aa20.21■□□□□ 0.83
PTPN18-203ENST00000409022 NUB1Q9Y5A7 615 aa20.21■□□□□ 0.83
PTPN18-203ENST00000409022 TDRD15B5MCY1 1934 aaKnown RBP20.21■□□□□ 0.83
PTPN18-203ENST00000409022 CCDC195A0A1B0GUA6 201 aa20.2■□□□□ 0.82
PTPN18-203ENST00000409022 PODXLO00592 558 aa20.2■□□□□ 0.82
PTPN18-203ENST00000409022 GAP43P17677 238 aa20.2■□□□□ 0.82
PTPN18-203ENST00000409022 ZXDAP98168 799 aa20.2■□□□□ 0.82
PTPN18-203ENST00000409022 PPP2R3AQ06190 1150 aa20.2■□□□□ 0.82
PTPN18-203ENST00000409022 PRSS55Q6UWB4 352 aaPredicted RBP20.2■□□□□ 0.82
PTPN18-203ENST00000409022 ANKS3Q6ZW76 656 aa20.2■□□□□ 0.82
PTPN18-203ENST00000409022 ZDHHC14Q8IZN3 488 aa20.2■□□□□ 0.82
PTPN18-203ENST00000409022 KREMEN2Q8NCW0 462 aa20.2■□□□□ 0.82
PTPN18-203ENST00000409022 LNX1Q8TBB1 728 aaPredicted RBP20.2■□□□□ 0.82
PTPN18-203ENST00000409022 HVCN1Q96D96 273 aa20.2■□□□□ 0.82
PTPN18-203ENST00000409022 MFSD14AQ96MC6 490 aa20.2■□□□□ 0.82
PTPN18-203ENST00000409022 LRRC27Q9C0I9 530 aa20.2■□□□□ 0.82
PTPN18-203ENST00000409022 CXCL16Q9H2A7 254 aa20.2■□□□□ 0.82
PTPN18-203ENST00000409022 C2CD4DB7Z1M9 353 aa20.19■□□□□ 0.82
PTPN18-203ENST00000409022 SPTLC2O15270 562 aa20.19■□□□□ 0.82
PTPN18-203ENST00000409022 PPP6R2O75170 966 aa20.19■□□□□ 0.82
PTPN18-203ENST00000409022 FGFR3P22607 806 aa20.19■□□□□ 0.82
PTPN18-203ENST00000409022 GTF2BQ00403 316 aa20.19■□□□□ 0.82
PTPN18-203ENST00000409022 SLFN12LQ6IEE8 588 aa20.19■□□□□ 0.82
PTPN18-203ENST00000409022 KANK3Q6NY19 840 aa20.19■□□□□ 0.82
PTPN18-203ENST00000409022 TRIM67Q6ZTA4 783 aa20.19■□□□□ 0.82
PTPN18-203ENST00000409022 USP49Q70CQ1 688 aa20.19■□□□□ 0.82
PTPN18-203ENST00000409022 MAP4K3Q8IVH8 894 aa20.19■□□□□ 0.82
PTPN18-203ENST00000409022 GLYCTKQ8IVS8 523 aa20.19■□□□□ 0.82
PTPN18-203ENST00000409022 CD302Q8IX05 232 aa20.19■□□□□ 0.82
PTPN18-203ENST00000409022 LRRC15Q8TF66 581 aa20.19■□□□□ 0.82
PTPN18-203ENST00000409022 SMG7Q92540 1137 aaKnown RBP20.19■□□□□ 0.82
PTPN18-203ENST00000409022 ST6GALNAC4Q9H4F1 302 aa20.19■□□□□ 0.82
PTPN18-203ENST00000409022 RPF1Q9H9Y2 349 aaKnown RBP20.19■□□□□ 0.82
PTPN18-203ENST00000409022 CDH22Q9UJ99 828 aa20.19■□□□□ 0.82
PTPN18-203ENST00000409022 EXOC7Q9UPT5 735 aa20.19■□□□□ 0.82
PTPN18-203ENST00000409022 ARIH1Q9Y4X5 557 aaPredicted RBP20.19■□□□□ 0.82
PTPN18-203ENST00000409022 SYN3O14994 580 aa20.18■□□□□ 0.82
PTPN18-203ENST00000409022 OGTO15294 1046 aa20.18■□□□□ 0.82
PTPN18-203ENST00000409022 YEATS4O95619 227 aa20.18■□□□□ 0.82
PTPN18-203ENST00000409022 RPL17P18621 184 aaKnown RBP20.18■□□□□ 0.82
PTPN18-203ENST00000409022 MTMR3Q13615 1198 aa20.18■□□□□ 0.82
PTPN18-203ENST00000409022 SLC10A6Q3KNW5 377 aa20.18■□□□□ 0.82
PTPN18-203ENST00000409022 LILRA6Q6PI73 481 aa20.18■□□□□ 0.82
PTPN18-203ENST00000409022 RTL10Q7L3V2 364 aa20.18■□□□□ 0.82
PTPN18-203ENST00000409022 DYMQ7RTS9 669 aa20.18■□□□□ 0.82
PTPN18-203ENST00000409022 UBALD2Q8IYN6 164 aa20.18■□□□□ 0.82
PTPN18-203ENST00000409022 LINC00301Q8NCQ3 95 aa20.18■□□□□ 0.82
PTPN18-203ENST00000409022 DDX12PQ92771 950 aa20.18■□□□□ 0.82
PTPN18-203ENST00000409022 ZMAT2Q96NC0 199 aaKnown RBP20.18■□□□□ 0.82
PTPN18-203ENST00000409022 MSTO1Q9BUK6 570 aa20.18■□□□□ 0.82
PTPN18-203ENST00000409022 GOLGA2P5Q9HBQ8 144 aa20.18■□□□□ 0.82
PTPN18-203ENST00000409022 UBQLN1Q9UMX0 589 aaKnown RBP20.18■□□□□ 0.82
PTPN18-203ENST00000409022 SORCS3Q9UPU3 1222 aa20.18■□□□□ 0.82
PTPN18-203ENST00000409022 BACE2Q9Y5Z0 518 aa20.18■□□□□ 0.82
PTPN18-203ENST00000409022 H7C4K7 107 aa20.17■□□□□ 0.82
PTPN18-203ENST00000409022 ZMYND10O75800 440 aa20.17■□□□□ 0.82
PTPN18-203ENST00000409022 HNRNPA1P09651 372 aaKnown RBP eCLIP20.17■□□□□ 0.82
PTPN18-203ENST00000409022 SPATA31D3P0C874 917 aa20.17■□□□□ 0.82
PTPN18-203ENST00000409022 CXCL8P10145 99 aa20.17■□□□□ 0.82
PTPN18-203ENST00000409022 SIGLEC14Q08ET2 396 aa20.17■□□□□ 0.82
PTPN18-203ENST00000409022 ATL3Q6DD88 541 aa20.17■□□□□ 0.82
PTPN18-203ENST00000409022 SPATA31D4Q6ZUB0 917 aa20.17■□□□□ 0.82
PTPN18-203ENST00000409022 APPL2Q8NEU8 664 aa20.17■□□□□ 0.82
PTPN18-203ENST00000409022 KIF12Q96FN5 646 aa20.17■□□□□ 0.82
PTPN18-203ENST00000409022 CLSTN3Q9BQT9 956 aa20.17■□□□□ 0.82
PTPN18-203ENST00000409022 PRKD2Q9BZL6 878 aa20.17■□□□□ 0.82
PTPN18-203ENST00000409022 MRPL44Q9H9J2 332 aaKnown RBP20.17■□□□□ 0.82
PTPN18-203ENST00000409022 WDR6Q9NNW5 1121 aaKnown RBP20.17■□□□□ 0.82
PTPN18-203ENST00000409022 MTRRQ9UBK8 725 aa20.17■□□□□ 0.82
PTPN18-203ENST00000409022 FBXW11Q9UKB1 542 aa20.17■□□□□ 0.82
PTPN18-203ENST00000409022 TMEM221A6NGB7 291 aa20.16■□□□□ 0.82
PTPN18-203ENST00000409022 M0R296 226 aa20.16■□□□□ 0.82
PTPN18-203ENST00000409022 XYLBO75191 536 aa20.16■□□□□ 0.82
PTPN18-203ENST00000409022 ZSCAN22P10073 491 aaPredicted RBP20.16■□□□□ 0.82
PTPN18-203ENST00000409022 CYP3A5P20815 502 aa20.16■□□□□ 0.82
PTPN18-203ENST00000409022 NMT1P30419 496 aaKnown RBP20.16■□□□□ 0.82
PTPN18-203ENST00000409022 MCM4P33991 863 aa20.16■□□□□ 0.82
PTPN18-203ENST00000409022 SOX4Q06945 474 aaPredicted RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms