RNA–Protein interactions for RNA: ENST00000408580.1

RNU6ATAC40P-201, Transcript of RNA, U6atac small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6ATAC40P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC40P-201ENST00000408580 NAP1L4Q99733 375 aaKnown RBP3.28□□□□□ -1.88
RNU6ATAC40P-201ENST00000408580 ZSWIM1Q9BR11 485 aa3.28□□□□□ -1.88
RNU6ATAC40P-201ENST00000408580 CORO1BQ9BR76 489 aa3.28□□□□□ -1.88
RNU6ATAC40P-201ENST00000408580 SYT11Q9BT88 431 aa3.28□□□□□ -1.88
RNU6ATAC40P-201ENST00000408580 TRAIPQ9BWF2 469 aa3.28□□□□□ -1.88
RNU6ATAC40P-201ENST00000408580 YIPF2Q9BWQ6 316 aa3.28□□□□□ -1.88
RNU6ATAC40P-201ENST00000408580 OXCT2Q9BYC2 517 aaPredicted RBP3.28□□□□□ -1.88
RNU6ATAC40P-201ENST00000408580 MRPS26Q9BYN8 205 aaKnown RBP3.28□□□□□ -1.88
RNU6ATAC40P-201ENST00000408580 PHACTR1Q9C0D0 580 aa3.28□□□□□ -1.88
RNU6ATAC40P-201ENST00000408580 C1orf21Q9H246 121 aa3.28□□□□□ -1.88
RNU6ATAC40P-201ENST00000408580 KCTD10Q9H3F6 313 aa3.28□□□□□ -1.88
RNU6ATAC40P-201ENST00000408580 GOLPH3Q9H4A6 298 aa3.28□□□□□ -1.88
RNU6ATAC40P-201ENST00000408580 TMEM165Q9HC07 324 aa3.28□□□□□ -1.88
RNU6ATAC40P-201ENST00000408580 C6orf50Q9HD87 102 aa3.28□□□□□ -1.88
RNU6ATAC40P-201ENST00000408580 AAASQ9NRG9 546 aa3.28□□□□□ -1.88
RNU6ATAC40P-201ENST00000408580 CNNM1Q9NRU3 951 aa3.28□□□□□ -1.88
RNU6ATAC40P-201ENST00000408580 ETNK2Q9NVF9 386 aa3.28□□□□□ -1.88
RNU6ATAC40P-201ENST00000408580 RHBDL2Q9NX52 303 aa3.28□□□□□ -1.88
RNU6ATAC40P-201ENST00000408580 NDE1Q9NXR1 346 aa3.28□□□□□ -1.88
RNU6ATAC40P-201ENST00000408580 NINJ2Q9NZG7 142 aa3.28□□□□□ -1.88
RNU6ATAC40P-201ENST00000408580 SPATA7Q9P0W8 599 aa3.28□□□□□ -1.88
RNU6ATAC40P-201ENST00000408580 BTBD7Q9P203 1132 aa3.28□□□□□ -1.88
RNU6ATAC40P-201ENST00000408580 ANKFY1Q9P2R3 1169 aa3.28□□□□□ -1.88
RNU6ATAC40P-201ENST00000408580 ABCF2Q9UG63 623 aa3.28□□□□□ -1.88
RNU6ATAC40P-201ENST00000408580 FETUBQ9UGM5 382 aa3.28□□□□□ -1.88
RNU6ATAC40P-201ENST00000408580 SAP30BPQ9UHR5 308 aaKnown RBP3.28□□□□□ -1.88
RNU6ATAC40P-201ENST00000408580 ZNHIT2Q9UHR6 403 aa3.28□□□□□ -1.88
RNU6ATAC40P-201ENST00000408580 SLC24A2Q9UI40 661 aa3.28□□□□□ -1.88
RNU6ATAC40P-201ENST00000408580 PPP1R9AQ9ULJ8 1098 aa3.28□□□□□ -1.88
RNU6ATAC40P-201ENST00000408580 POLIQ9UNA4 740 aa3.28□□□□□ -1.88
RNU6ATAC40P-201ENST00000408580 CHMP2BQ9UQN3 213 aa3.28□□□□□ -1.88
RNU6ATAC40P-201ENST00000408580 NAALADL1Q9UQQ1 740 aa3.28□□□□□ -1.88
RNU6ATAC40P-201ENST00000408580 DMTF1Q9Y222 760 aa3.28□□□□□ -1.88
RNU6ATAC40P-201ENST00000408580 TRAF3IP3Q9Y228 551 aa3.28□□□□□ -1.88
RNU6ATAC40P-201ENST00000408580 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.28□□□□□ -1.88
RNU6ATAC40P-201ENST00000408580 CTDP1Q9Y5B0 961 aaPredicted RBP3.28□□□□□ -1.88
RNU6ATAC40P-201ENST00000408580 ZNFX1Q9P2E3 1918 aaKnown RBP3.28□□□□□ -1.88
RNU6ATAC40P-201ENST00000408580 NAV1Q8NEY1 1877 aa3.28□□□□□ -1.88
RNU6ATAC40P-201ENST00000408580 CDK5RAP2Q96SN8 1893 aa3.28□□□□□ -1.88
RNU6ATAC40P-201ENST00000408580 TAF1LQ8IZX4 1826 aa3.28□□□□□ -1.88
RNU6ATAC40P-201ENST00000408580 TNS2Q63HR2 1409 aa3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 SHANK3Q9BYB0 1731 aa3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 ZNF142P52746 1687 aaPredicted RBP3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 NFASCO94856 1347 aa3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 SPATA31A1Q5TZJ5 1347 aa3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 TMEM247A6NEH6 219 aa3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 MINDY4BA8MYZ0 360 aa3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 MATN2O00339 956 aa3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 PDXKO00764 312 aa3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 FSCN2O14926 492 aa3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 CASQ2O14958 399 aaPredicted RBP3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 PLSCR1O15162 318 aa3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 VILLO15195 856 aa3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 TM9SF1O15321 606 aa3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 BUD23O43709 281 aaKnown RBP3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 TYROBPO43914 113 aa3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 CCNT1O60563 726 aaKnown RBP3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 PDE8AO60658 829 aa3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 OPHN1O60890 802 aa3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 RNASEH1O60930 286 aaKnown RBP3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 SPAG7O75391 227 aa3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 SUPT3HO75486 399 aa3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 TM7SF2O76062 418 aa3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 ACSL3O95573 720 aa3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 GCP02774 474 aa3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 ALDH2P05091 517 aa3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 EIF2S1P05198 315 aaKnown RBP3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 SPATA31D3P0C874 917 aa3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 ESRRAP11474 423 aaPredicted RBP3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 CETPP11597 493 aa3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 CDK4P11802 303 aa3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 HARSP12081 509 aaKnown RBP3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 XRCC5P13010 732 aaKnown RBP3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 ATF2P15336 505 aa3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 PLCG2P16885 1265 aa3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 CYP11B2P19099 503 aa3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 SLC9A1P19634 815 aa3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 TNFAIP3P21580 790 aa3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 CYP7A1P22680 504 aa3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 IVDP26440 423 aa3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 LTKP29376 864 aa3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 GTF2H1P32780 548 aa3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 HOXD12P35452 270 aa3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 PGM1P36871 562 aa3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 IGHMBP2P38935 993 aaKnown RBP3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 CCNFP41002 786 aa3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 CETN2P41208 172 aa3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 TECP42680 631 aa3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 NEK3P51956 506 aa3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 ARFIP2P53365 341 aa3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 EMP3P54852 163 aa3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 MTTPP55157 894 aa3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 CTSWP56202 376 aa3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 CABP4P57796 275 aa3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 ACTR3P61158 418 aa3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 PLOD1Q02809 727 aaPredicted RBP3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 CREB5Q02930 508 aa3.27□□□□□ -1.89
RNU6ATAC40P-201ENST00000408580 GSTM4Q03013 218 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms