RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 ARHGEF40Q8TER5 1519 aa12.68□□□□□ -0.38
SMCR8-201ENST00000406438 SULT1E1P49888 294 aa12.68□□□□□ -0.38
SMCR8-201ENST00000406438 MRPS25P82663 173 aaKnown RBP12.68□□□□□ -0.38
SMCR8-201ENST00000406438 ARHGEF7Q14155 803 aa12.68□□□□□ -0.38
SMCR8-201ENST00000406438 NRKQ7Z2Y5 1582 aa12.68□□□□□ -0.38
SMCR8-201ENST00000406438 PRRG1O14668 218 aa12.68□□□□□ -0.38
SMCR8-201ENST00000406438 TMEM94Q12767 1356 aa12.68□□□□□ -0.38
SMCR8-201ENST00000406438 TRIM49BA6NDI0 452 aa12.67□□□□□ -0.38
SMCR8-201ENST00000406438 KIF28PB7ZC32 967 aa12.67□□□□□ -0.38
SMCR8-201ENST00000406438 PSMA3P25788 255 aa12.67□□□□□ -0.38
SMCR8-201ENST00000406438 PLEKHA5Q9HAU0 1116 aa12.67□□□□□ -0.38
SMCR8-201ENST00000406438 CLTCQ00610 1675 aaKnown RBP12.67□□□□□ -0.38
SMCR8-201ENST00000406438 C3orf70A6NLC5 250 aaPredicted RBP12.67□□□□□ -0.38
SMCR8-201ENST00000406438 SDE2Q6IQ49 451 aa12.67□□□□□ -0.38
SMCR8-201ENST00000406438 PID1Q7Z2X4 250 aa12.67□□□□□ -0.38
SMCR8-201ENST00000406438 STRBPQ96SI9 672 aaKnown RBP12.67□□□□□ -0.38
SMCR8-201ENST00000406438 MTIF3Q9H2K0 278 aaKnown RBP12.67□□□□□ -0.38
SMCR8-201ENST00000406438 SAMD9LQ8IVG5 1584 aa12.67□□□□□ -0.38
SMCR8-201ENST00000406438 TNPO2O14787 897 aaKnown RBP12.67□□□□□ -0.38
SMCR8-201ENST00000406438 TRPC1P48995 793 aa12.67□□□□□ -0.38
SMCR8-201ENST00000406438 NCKAP1LP55160 1127 aa12.67□□□□□ -0.38
SMCR8-201ENST00000406438 DYNC1I2Q13409 638 aaKnown RBP12.67□□□□□ -0.38
SMCR8-201ENST00000406438 PHKG1Q16816 387 aa12.67□□□□□ -0.38
SMCR8-201ENST00000406438 ZNF746Q6NUN9 644 aaPredicted RBP12.67□□□□□ -0.38
SMCR8-201ENST00000406438 NFRKBQ6P4R8 1299 aa12.67□□□□□ -0.38
SMCR8-201ENST00000406438 ADCK2Q7Z695 626 aa12.67□□□□□ -0.38
SMCR8-201ENST00000406438 KIAA2013Q8IYS2 634 aa12.67□□□□□ -0.38
SMCR8-201ENST00000406438 CLEC4FQ8N1N0 589 aa12.67□□□□□ -0.38
SMCR8-201ENST00000406438 ARL8AQ96BM9 186 aa12.67□□□□□ -0.38
SMCR8-201ENST00000406438 C18orf8Q96DM3 657 aa12.67□□□□□ -0.38
SMCR8-201ENST00000406438 TMEM47Q9BQJ4 181 aa12.67□□□□□ -0.38
SMCR8-201ENST00000406438 SRP68Q9UHB9 627 aaKnown RBP12.67□□□□□ -0.38
SMCR8-201ENST00000406438 NPHP4O75161 1426 aaPredicted RBP12.67□□□□□ -0.38
SMCR8-201ENST00000406438 NCAPHQ15003 741 aa12.67□□□□□ -0.38
SMCR8-201ENST00000406438 HERC5Q9UII4 1024 aaKnown RBP12.67□□□□□ -0.38
SMCR8-201ENST00000406438 PKP3Q9Y446 797 aa12.67□□□□□ -0.38
SMCR8-201ENST00000406438 STXBP3O00186 592 aa12.67□□□□□ -0.38
SMCR8-201ENST00000406438 ATP1A3P13637 1013 aa12.67□□□□□ -0.38
SMCR8-201ENST00000406438 COBLL1Q53SF7 1204 aa12.67□□□□□ -0.38
SMCR8-201ENST00000406438 RCOR2Q8IZ40 523 aa12.67□□□□□ -0.38
SMCR8-201ENST00000406438 GFM2Q969S9 779 aaKnown RBP12.67□□□□□ -0.38
SMCR8-201ENST00000406438 TUFT1Q9NNX1 390 aa12.67□□□□□ -0.38
SMCR8-201ENST00000406438 PIN4Q9Y237 131 aaKnown RBP12.67□□□□□ -0.38
SMCR8-201ENST00000406438 MROH7-TTC4A0A0A0MT08 1334 aa12.67□□□□□ -0.38
SMCR8-201ENST00000406438 CPDO75976 1380 aa12.67□□□□□ -0.38
SMCR8-201ENST00000406438 KRT17Q04695 432 aa12.67□□□□□ -0.38
SMCR8-201ENST00000406438 CACNB2Q08289 660 aaPredicted RBP12.67□□□□□ -0.38
SMCR8-201ENST00000406438 PIGHQ14442 188 aaPredicted RBP12.67□□□□□ -0.38
SMCR8-201ENST00000406438 KDELC2Q7Z4H8 507 aa12.67□□□□□ -0.38
SMCR8-201ENST00000406438 ADCK1Q86TW2 530 aa12.67□□□□□ -0.38
SMCR8-201ENST00000406438 TDRD3Q9H7E2 651 aaKnown RBP12.67□□□□□ -0.38
SMCR8-201ENST00000406438 RCAN1P53805 252 aa12.67□□□□□ -0.38
SMCR8-201ENST00000406438 ACTR2P61160 394 aa12.67□□□□□ -0.38
SMCR8-201ENST00000406438 EIF2B5Q13144 721 aaKnown RBP12.67□□□□□ -0.38
SMCR8-201ENST00000406438 NUP93Q8N1F7 819 aa12.67□□□□□ -0.38
SMCR8-201ENST00000406438 PCYOX1LQ8NBM8 494 aa12.67□□□□□ -0.38
SMCR8-201ENST00000406438 PTPRN2Q92932 1015 aa12.67□□□□□ -0.38
SMCR8-201ENST00000406438 PIH1D3Q9NQM4 214 aaKnown RBP12.67□□□□□ -0.38
SMCR8-201ENST00000406438 NEDD4P46934 1319 aa12.66□□□□□ -0.38
SMCR8-201ENST00000406438 ASB14A6NK59 587 aa12.66□□□□□ -0.38
SMCR8-201ENST00000406438 PTPN12Q05209 780 aaKnown RBP12.66□□□□□ -0.38
SMCR8-201ENST00000406438 TWF1Q12792 350 aa12.66□□□□□ -0.38
SMCR8-201ENST00000406438 TXNRD1Q16881 649 aa12.66□□□□□ -0.38
SMCR8-201ENST00000406438 IZUMO3Q5VZ72 239 aa12.66□□□□□ -0.38
SMCR8-201ENST00000406438 FBXO38Q6PIJ6 1188 aa12.66□□□□□ -0.38
SMCR8-201ENST00000406438 TMEM245Q9H330 911 aa12.66□□□□□ -0.38
SMCR8-201ENST00000406438 RPAP3Q9H6T3 665 aaPredicted RBP12.66□□□□□ -0.38
SMCR8-201ENST00000406438 BLOC1S6Q9UL45 172 aa12.66□□□□□ -0.38
SMCR8-201ENST00000406438 MINPP1Q9UNW1 487 aa12.66□□□□□ -0.38
SMCR8-201ENST00000406438 KBTBD13C9JR72 458 aa12.66□□□□□ -0.38
SMCR8-201ENST00000406438 SERPINB4P48594 390 aa12.66□□□□□ -0.38
SMCR8-201ENST00000406438 ALDH18A1P54886 795 aaKnown RBP12.66□□□□□ -0.38
SMCR8-201ENST00000406438 PLEKHA8Q96JA3 519 aa12.66□□□□□ -0.38
SMCR8-201ENST00000406438 GPR101Q96P66 508 aaPredicted RBP12.66□□□□□ -0.38
SMCR8-201ENST00000406438 WWP1Q9H0M0 922 aa12.66□□□□□ -0.38
SMCR8-201ENST00000406438 LY9Q9HBG7 655 aa12.66□□□□□ -0.38
SMCR8-201ENST00000406438 MRFAP1Q9Y605 127 aa12.66□□□□□ -0.38
SMCR8-201ENST00000406438 PYGMP11217 842 aa12.66□□□□□ -0.38
SMCR8-201ENST00000406438 ZNF211Q13398 564 aaPredicted RBP12.66□□□□□ -0.38
SMCR8-201ENST00000406438 SNX17Q15036 470 aa12.66□□□□□ -0.38
SMCR8-201ENST00000406438 E2F4Q16254 413 aa12.66□□□□□ -0.38
SMCR8-201ENST00000406438 AASDHQ4L235 1098 aaPredicted RBP12.66□□□□□ -0.38
SMCR8-201ENST00000406438 SUSD4Q5VX71 490 aa12.66□□□□□ -0.38
SMCR8-201ENST00000406438 PIGBQ92521 554 aa12.66□□□□□ -0.38
SMCR8-201ENST00000406438 CHAMP1Q96JM3 812 aa12.66□□□□□ -0.38
SMCR8-201ENST00000406438 IGSF1Q8N6C5 1336 aa12.66□□□□□ -0.38
SMCR8-201ENST00000406438 ANO9A1A5B4 782 aa12.66□□□□□ -0.38
SMCR8-201ENST00000406438 CUL3Q13618 768 aa12.66□□□□□ -0.38
SMCR8-201ENST00000406438 TMEM132DQ14C87 1099 aa12.66□□□□□ -0.38
SMCR8-201ENST00000406438 UGP2Q16851 508 aa12.66□□□□□ -0.38
SMCR8-201ENST00000406438 ARHGAP18Q8N392 663 aa12.66□□□□□ -0.38
SMCR8-201ENST00000406438 DDX28Q9NUL7 540 aaKnown RBP12.66□□□□□ -0.38
SMCR8-201ENST00000406438 HSPBP1Q9NZL4 362 aa12.66□□□□□ -0.38
SMCR8-201ENST00000406438 TCP11X1B4DZS4 312 aa12.66□□□□□ -0.38
SMCR8-201ENST00000406438 PRUNE1Q86TP1 453 aa12.66□□□□□ -0.38
SMCR8-201ENST00000406438 OTUD5Q96G74 571 aa12.66□□□□□ -0.38
SMCR8-201ENST00000406438 PRMT1Q99873 361 aaKnown RBP12.66□□□□□ -0.38
SMCR8-201ENST00000406438 ETNK1Q9HBU6 452 aa12.66□□□□□ -0.38
SMCR8-201ENST00000406438 CAMSAP1Q5T5Y3 1602 aa12.66□□□□□ -0.38
SMCR8-201ENST00000406438 ADCY3O60266 1144 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms