RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 PDGFBP01127 241 aaPredicted RBP16.83■□□□□ 0.28
TPM1-207ENST00000403994 PLCG1P19174 1290 aa16.83■□□□□ 0.28
TPM1-207ENST00000403994 LONP1P36776 959 aaKnown RBP16.83■□□□□ 0.28
TPM1-207ENST00000403994 UBA7P41226 1012 aa16.83■□□□□ 0.28
TPM1-207ENST00000403994 SMTNP53814 917 aa16.83■□□□□ 0.28
TPM1-207ENST00000403994 NCKAP1LP55160 1127 aa16.83■□□□□ 0.28
TPM1-207ENST00000403994 STRN3Q13033 797 aa16.83■□□□□ 0.28
TPM1-207ENST00000403994 SF3A1Q15459 793 aaKnown RBP16.83■□□□□ 0.28
TPM1-207ENST00000403994 UPP1Q16831 310 aa16.83■□□□□ 0.28
TPM1-207ENST00000403994 CD300LGQ6UXG3 332 aa16.83■□□□□ 0.28
TPM1-207ENST00000403994 GPBP1Q86WP2 473 aa16.83■□□□□ 0.28
TPM1-207ENST00000403994 CALML4Q96GE6 196 aa16.83■□□□□ 0.28
TPM1-207ENST00000403994 ZMAT2Q96NC0 199 aaKnown RBP16.83■□□□□ 0.28
TPM1-207ENST00000403994 BLOC1S4Q9NUP1 217 aa16.83■□□□□ 0.28
TPM1-207ENST00000403994 CNTN3Q9P232 1028 aa16.83■□□□□ 0.28
TPM1-207ENST00000403994 ODF2LQ9ULJ1 636 aa16.83■□□□□ 0.28
TPM1-207ENST00000403994 ADAM12O43184 909 aa16.82■□□□□ 0.28
TPM1-207ENST00000403994 KCNE1P15382 129 aa16.82■□□□□ 0.28
TPM1-207ENST00000403994 PDCP20941 246 aa16.82■□□□□ 0.28
TPM1-207ENST00000403994 FGFR3P22607 806 aa16.82■□□□□ 0.28
TPM1-207ENST00000403994 HOXD11P31277 338 aaPredicted RBP16.82■□□□□ 0.28
TPM1-207ENST00000403994 VCPP55072 806 aaKnown RBP16.82■□□□□ 0.28
TPM1-207ENST00000403994 KARSQ15046 597 aaKnown RBP16.82■□□□□ 0.28
TPM1-207ENST00000403994 PDXDC1Q6P996 788 aa16.82■□□□□ 0.28
TPM1-207ENST00000403994 ZBTB45Q96K62 511 aaPredicted RBP16.82■□□□□ 0.28
TPM1-207ENST00000403994 TCHPQ9BT92 498 aa16.82■□□□□ 0.28
TPM1-207ENST00000403994 SLC38A7Q9NVC3 462 aa16.82■□□□□ 0.28
TPM1-207ENST00000403994 LARSQ9P2J5 1176 aaKnown RBP16.82■□□□□ 0.28
TPM1-207ENST00000403994 H0YCG3 227 aa16.81■□□□□ 0.28
TPM1-207ENST00000403994 I3L4J1 428 aa16.81■□□□□ 0.28
TPM1-207ENST00000403994 PODXLO00592 558 aa16.81■□□□□ 0.28
TPM1-207ENST00000403994 ZMYND10O75800 440 aa16.81■□□□□ 0.28
TPM1-207ENST00000403994 TKTP29401 623 aaKnown RBP16.81■□□□□ 0.28
TPM1-207ENST00000403994 ZNF131P52739 623 aa16.81■□□□□ 0.28
TPM1-207ENST00000403994 NHLH1Q02575 133 aa16.81■□□□□ 0.28
TPM1-207ENST00000403994 MCL1Q07820 350 aa16.81■□□□□ 0.28
TPM1-207ENST00000403994 LIN9Q5TKA1 542 aa16.81■□□□□ 0.28
TPM1-207ENST00000403994 DCLRE1AQ6PJP8 1040 aa16.81■□□□□ 0.28
TPM1-207ENST00000403994 ZPBP2Q6X784 338 aa16.81■□□□□ 0.28
TPM1-207ENST00000403994 PRSS33Q8NF86 280 aa16.81■□□□□ 0.28
TPM1-207ENST00000403994 RASSF8Q8NHQ8 419 aa16.81■□□□□ 0.28
TPM1-207ENST00000403994 RAD54LQ92698 747 aa16.81■□□□□ 0.28
TPM1-207ENST00000403994 STAMQ92783 540 aa16.81■□□□□ 0.28
TPM1-207ENST00000403994 KCNN1Q92952 543 aa16.81■□□□□ 0.28
TPM1-207ENST00000403994 C18orf25Q96B23 403 aaPredicted RBP16.81■□□□□ 0.28
TPM1-207ENST00000403994 DDX27Q96GQ7 796 aaKnown RBP16.81■□□□□ 0.28
TPM1-207ENST00000403994 ACAP3Q96P50 834 aa16.81■□□□□ 0.28
TPM1-207ENST00000403994 BACH2Q9BYV9 841 aa16.81■□□□□ 0.28
TPM1-207ENST00000403994 PRKD2Q9BZL6 878 aa16.81■□□□□ 0.28
TPM1-207ENST00000403994 MTRRQ9UBK8 725 aa16.81■□□□□ 0.28
TPM1-207ENST00000403994 KCNG1Q9UIX4 513 aa16.81■□□□□ 0.28
TPM1-207ENST00000403994 ANK1P16157 1881 aa16.8■□□□□ 0.28
TPM1-207ENST00000403994 TSC2P49815 1807 aa16.8■□□□□ 0.28
TPM1-207ENST00000403994 K7ENM7 598 aa16.8■□□□□ 0.28
TPM1-207ENST00000403994 GBP2P32456 591 aaPredicted RBP16.8■□□□□ 0.28
TPM1-207ENST00000403994 BRCC3P46736 316 aa16.8■□□□□ 0.28
TPM1-207ENST00000403994 RESTQ13127 1097 aa16.8■□□□□ 0.28
TPM1-207ENST00000403994 DHX8Q14562 1220 aaKnown RBP16.8■□□□□ 0.28
TPM1-207ENST00000403994 MCM6Q14566 821 aa16.8■□□□□ 0.28
TPM1-207ENST00000403994 PTPAQ15257 358 aa16.8■□□□□ 0.28
TPM1-207ENST00000403994 SEZ6Q53EL9 994 aa16.8■□□□□ 0.28
TPM1-207ENST00000403994 IER5LQ5T953 404 aa16.8■□□□□ 0.28
TPM1-207ENST00000403994 GET4Q7L5D6 327 aaPredicted RBP16.8■□□□□ 0.28
TPM1-207ENST00000403994 BICD1Q96G01 975 aa16.8■□□□□ 0.28
TPM1-207ENST00000403994 MYADMQ96S97 322 aa16.8■□□□□ 0.28
TPM1-207ENST00000403994 HAPLN2Q9GZV7 340 aa16.8■□□□□ 0.28
TPM1-207ENST00000403994 PIDD1Q9HB75 910 aa16.8■□□□□ 0.28
TPM1-207ENST00000403994 EPS15L1Q9UBC2 864 aa16.8■□□□□ 0.28
TPM1-207ENST00000403994 CLIC4Q9Y696 253 aa16.8■□□□□ 0.28
TPM1-207ENST00000403994 DMDP11532 3685 aa16.8■□□□□ 0.28
TPM1-207ENST00000403994 NOTCH4Q99466 2003 aa16.79■□□□□ 0.28
TPM1-207ENST00000403994 HNRNPDLO14979 420 aaKnown RBP16.79■□□□□ 0.28
TPM1-207ENST00000403994 TRAPPC3O43617 180 aa16.79■□□□□ 0.28
TPM1-207ENST00000403994 C8AP07357 584 aa16.79■□□□□ 0.28
TPM1-207ENST00000403994 CXCL8P10145 99 aa16.79■□□□□ 0.28
TPM1-207ENST00000403994 SYT1P21579 422 aa16.79■□□□□ 0.28
TPM1-207ENST00000403994 HOXA9P31269 272 aa16.79■□□□□ 0.28
TPM1-207ENST00000403994 OR1D2P34982 312 aa16.79■□□□□ 0.28
TPM1-207ENST00000403994 RSPO2Q6UXX9 243 aaPredicted RBP16.79■□□□□ 0.28
TPM1-207ENST00000403994 HAUS6Q7Z4H7 955 aa16.79■□□□□ 0.28
TPM1-207ENST00000403994 SLC7A14Q8TBB6 771 aa16.79■□□□□ 0.28
TPM1-207ENST00000403994 LARP4BQ92615 738 aaKnown RBP16.79■□□□□ 0.28
TPM1-207ENST00000403994 KCNK12Q9HB15 430 aa16.79■□□□□ 0.28
TPM1-207ENST00000403994 PARVGQ9HBI0 331 aa16.79■□□□□ 0.28
TPM1-207ENST00000403994 TUBGCP4Q9UGJ1 667 aa16.79■□□□□ 0.28
TPM1-207ENST00000403994 DUSP12Q9UNI6 340 aa16.79■□□□□ 0.28
TPM1-207ENST00000403994 CDY1Q9Y6F8 540 aa16.79■□□□□ 0.28
TPM1-207ENST00000403994 CLDN3O15551 220 aa16.78■□□□□ 0.28
TPM1-207ENST00000403994 TBCAO75347 108 aaKnown RBP16.78■□□□□ 0.28
TPM1-207ENST00000403994 FAM13AO94988 1023 aa16.78■□□□□ 0.28
TPM1-207ENST00000403994 HNRNPA1P09651 372 aaKnown RBP eCLIP16.78■□□□□ 0.28
TPM1-207ENST00000403994 TDGQ13569 410 aa16.78■□□□□ 0.28
TPM1-207ENST00000403994 RAB33AQ14088 237 aa16.78■□□□□ 0.28
TPM1-207ENST00000403994 SLC10A6Q3KNW5 377 aa16.78■□□□□ 0.28
TPM1-207ENST00000403994 ANKS3Q6ZW76 656 aa16.78■□□□□ 0.28
TPM1-207ENST00000403994 USP49Q70CQ1 688 aa16.78■□□□□ 0.28
TPM1-207ENST00000403994 INTS4Q96HW7 963 aaKnown RBP16.78■□□□□ 0.28
TPM1-207ENST00000403994 CCSER1Q9C0I3 900 aa16.78■□□□□ 0.28
TPM1-207ENST00000403994 IGSF9Q9P2J2 1179 aa16.78■□□□□ 0.28
TPM1-207ENST00000403994 FBXO2Q9UK22 296 aaPredicted RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms