RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 BRMS1Q9HCU9 246 aa9.7□□□□□ -0.86
CAPN3-208ENST00000397204 DLGAP2Q9P1A6 1054 aa9.7□□□□□ -0.86
CAPN3-208ENST00000397204 PARP2Q9UGN5 583 aa9.7□□□□□ -0.86
CAPN3-208ENST00000397204 CA14Q9ULX7 337 aa9.7□□□□□ -0.86
CAPN3-208ENST00000397204 STK36Q9NRP7 1315 aa9.7□□□□□ -0.86
CAPN3-208ENST00000397204 SF3B1O75533 1304 aaKnown RBP eCLIP9.69□□□□□ -0.86
CAPN3-208ENST00000397204 NPTXRO95502 500 aa9.69□□□□□ -0.86
CAPN3-208ENST00000397204 RPL17P18621 184 aaKnown RBP9.69□□□□□ -0.86
CAPN3-208ENST00000397204 RARRES1P49788 294 aa9.69□□□□□ -0.86
CAPN3-208ENST00000397204 ELAVL2Q12926 359 aaKnown RBP9.69□□□□□ -0.86
CAPN3-208ENST00000397204 TUSC3Q13454 348 aa9.69□□□□□ -0.86
CAPN3-208ENST00000397204 HSP90AA2PQ14568 343 aaPredicted RBP9.69□□□□□ -0.86
CAPN3-208ENST00000397204 FAM187BQ17R55 369 aa9.69□□□□□ -0.86
CAPN3-208ENST00000397204 UVSSAQ2YD98 709 aa9.69□□□□□ -0.86
CAPN3-208ENST00000397204 EARS2Q5JPH6 523 aaKnown RBP9.69□□□□□ -0.86
CAPN3-208ENST00000397204 PDXDC1Q6P996 788 aa9.69□□□□□ -0.86
CAPN3-208ENST00000397204 ZC3H14Q6PJT7 736 aaKnown RBP9.69□□□□□ -0.86
CAPN3-208ENST00000397204 RTL10Q7L3V2 364 aa9.69□□□□□ -0.86
CAPN3-208ENST00000397204 PIK3R5Q8WYR1 880 aa9.69□□□□□ -0.86
CAPN3-208ENST00000397204 CCDC43Q96MW1 224 aaKnown RBP9.69□□□□□ -0.86
CAPN3-208ENST00000397204 TTPALQ9BTX7 342 aa9.69□□□□□ -0.86
CAPN3-208ENST00000397204 FZD8Q9H461 694 aa9.69□□□□□ -0.86
CAPN3-208ENST00000397204 TTC12Q9H892 705 aaPredicted RBP9.69□□□□□ -0.86
CAPN3-208ENST00000397204 ARHGEF3Q9NR81 526 aa9.69□□□□□ -0.86
CAPN3-208ENST00000397204 GJB4Q9NTQ9 266 aa9.69□□□□□ -0.86
CAPN3-208ENST00000397204 KLK14Q9P0G3 267 aa9.69□□□□□ -0.86
CAPN3-208ENST00000397204 ORC3Q9UBD5 711 aaPredicted RBP9.69□□□□□ -0.86
CAPN3-208ENST00000397204 CDH7Q9ULB5 785 aa9.69□□□□□ -0.86
CAPN3-208ENST00000397204 EPG5Q9HCE0 2579 aa9.69□□□□□ -0.86
CAPN3-208ENST00000397204 CACNA1IQ9P0X4 2223 aa9.68□□□□□ -0.86
CAPN3-208ENST00000397204 B4GALT5O43286 388 aa9.68□□□□□ -0.86
CAPN3-208ENST00000397204 THP07101 528 aa9.68□□□□□ -0.86
CAPN3-208ENST00000397204 DCNP07585 359 aaKnown RBP9.68□□□□□ -0.86
CAPN3-208ENST00000397204 POU2F2P09086 479 aa9.68□□□□□ -0.86
CAPN3-208ENST00000397204 SP9P0CG40 484 aa9.68□□□□□ -0.86
CAPN3-208ENST00000397204 HOXA9P31269 272 aa9.68□□□□□ -0.86
CAPN3-208ENST00000397204 KRT2P35908 639 aa9.68□□□□□ -0.86
CAPN3-208ENST00000397204 TXKP42681 527 aa9.68□□□□□ -0.86
CAPN3-208ENST00000397204 GPC5P78333 572 aa9.68□□□□□ -0.86
CAPN3-208ENST00000397204 NR5A1Q13285 461 aa9.68□□□□□ -0.86
CAPN3-208ENST00000397204 ANKRD1Q15327 319 aa9.68□□□□□ -0.86
CAPN3-208ENST00000397204 CALCRLQ16602 461 aa9.68□□□□□ -0.86
CAPN3-208ENST00000397204 SPECC1Q5M775 1068 aa9.68□□□□□ -0.86
CAPN3-208ENST00000397204 RTP2Q5QGT7 225 aa9.68□□□□□ -0.86
CAPN3-208ENST00000397204 LIN9Q5TKA1 542 aa9.68□□□□□ -0.86
CAPN3-208ENST00000397204 PRSS55Q6UWB4 352 aaPredicted RBP9.68□□□□□ -0.86
CAPN3-208ENST00000397204 GET4Q7L5D6 327 aaPredicted RBP9.68□□□□□ -0.86
CAPN3-208ENST00000397204 GRASPQ7Z6J2 395 aaPredicted RBP9.68□□□□□ -0.86
CAPN3-208ENST00000397204 GLYCTKQ8IVS8 523 aa9.68□□□□□ -0.86
CAPN3-208ENST00000397204 MCPH1Q8NEM0 835 aa9.68□□□□□ -0.86
CAPN3-208ENST00000397204 LNX1Q8TBB1 728 aaPredicted RBP9.68□□□□□ -0.86
CAPN3-208ENST00000397204 PIGOQ8TEQ8 1089 aa9.68□□□□□ -0.86
CAPN3-208ENST00000397204 RUBCNQ92622 972 aa9.68□□□□□ -0.86
CAPN3-208ENST00000397204 CLSTN3Q9BQT9 956 aa9.68□□□□□ -0.86
CAPN3-208ENST00000397204 OSBPL6Q9BZF3 934 aa9.68□□□□□ -0.86
CAPN3-208ENST00000397204 C2orf40Q9H1Z8 148 aa9.68□□□□□ -0.86
CAPN3-208ENST00000397204 PRMT7Q9NVM4 692 aaPredicted RBP9.68□□□□□ -0.86
CAPN3-208ENST00000397204 FBXW11Q9UKB1 542 aa9.68□□□□□ -0.86
CAPN3-208ENST00000397204 TPCN1Q9ULQ1 816 aa9.68□□□□□ -0.86
CAPN3-208ENST00000397204 NUMBLQ9Y6R0 609 aa9.68□□□□□ -0.86
CAPN3-208ENST00000397204 R4GN57 208 aa9.68□□□□□ -0.86
CAPN3-208ENST00000397204 DNAH14Q0VDD8 3507 aa9.68□□□□□ -0.86
CAPN3-208ENST00000397204 KANSL1LA0AUZ9 987 aa9.67□□□□□ -0.86
CAPN3-208ENST00000397204 LRRIQ4A6NIV6 560 aa9.67□□□□□ -0.86
CAPN3-208ENST00000397204 XYLBO75191 536 aa9.67□□□□□ -0.86
CAPN3-208ENST00000397204 CTDNEP1O95476 244 aa9.67□□□□□ -0.86
CAPN3-208ENST00000397204 PRKCQQ04759 706 aa9.67□□□□□ -0.86
CAPN3-208ENST00000397204 RAB33AQ14088 237 aa9.67□□□□□ -0.86
CAPN3-208ENST00000397204 PSMD5Q16401 504 aa9.67□□□□□ -0.86
CAPN3-208ENST00000397204 ZNF528Q3MIS6 628 aa9.67□□□□□ -0.86
CAPN3-208ENST00000397204 SLC44A4Q53GD3 710 aa9.67□□□□□ -0.86
CAPN3-208ENST00000397204 PPM1LQ5SGD2 360 aa9.67□□□□□ -0.86
CAPN3-208ENST00000397204 FAM171A1Q5VUB5 890 aa9.67□□□□□ -0.86
CAPN3-208ENST00000397204 PARM1Q6UWI2 310 aa9.67□□□□□ -0.86
CAPN3-208ENST00000397204 RSPO2Q6UXX9 243 aaPredicted RBP9.67□□□□□ -0.86
CAPN3-208ENST00000397204 MTSS1LQ765P7 747 aa9.67□□□□□ -0.86
CAPN3-208ENST00000397204 CDR2LQ86X02 465 aaPredicted RBP9.67□□□□□ -0.86
CAPN3-208ENST00000397204 CEP57Q86XR8 500 aa9.67□□□□□ -0.86
CAPN3-208ENST00000397204 ZBTB8OSQ8IWT0 167 aa9.67□□□□□ -0.86
CAPN3-208ENST00000397204 PJA1Q8NG27 643 aa9.67□□□□□ -0.86
CAPN3-208ENST00000397204 RABGGTAQ92696 567 aa9.67□□□□□ -0.86
CAPN3-208ENST00000397204 FGF14Q92915 247 aa9.67□□□□□ -0.86
CAPN3-208ENST00000397204 TNFRSF25Q93038 417 aa9.67□□□□□ -0.86
CAPN3-208ENST00000397204 MTMR9Q96QG7 549 aa9.67□□□□□ -0.86
CAPN3-208ENST00000397204 NACC1Q96RE7 527 aa9.67□□□□□ -0.86
CAPN3-208ENST00000397204 NELL2Q99435 816 aa9.67□□□□□ -0.86
CAPN3-208ENST00000397204 PAAF1Q9BRP4 392 aa9.67□□□□□ -0.86
CAPN3-208ENST00000397204 RPP25Q9BUL9 199 aaKnown RBP9.67□□□□□ -0.86
CAPN3-208ENST00000397204 DDX23Q9BUQ8 820 aaKnown RBP9.67□□□□□ -0.86
CAPN3-208ENST00000397204 POLR3FQ9H1D9 316 aaPredicted RBP9.67□□□□□ -0.86
CAPN3-208ENST00000397204 KCNH3Q9ULD8 1083 aa9.67□□□□□ -0.86
CAPN3-208ENST00000397204 SPTBN2O15020 2390 aa9.67□□□□□ -0.86
CAPN3-208ENST00000397204 DENND4AQ7Z401 1863 aa9.66□□□□□ -0.86
CAPN3-208ENST00000397204 A0A087WWV3 80 aa9.66□□□□□ -0.86
CAPN3-208ENST00000397204 CASTOR2A6NHX0 329 aa9.66□□□□□ -0.86
CAPN3-208ENST00000397204 ACKR2O00590 384 aa9.66□□□□□ -0.86
CAPN3-208ENST00000397204 PTGESO14684 152 aa9.66□□□□□ -0.86
CAPN3-208ENST00000397204 N4BP3O15049 544 aa9.66□□□□□ -0.86
CAPN3-208ENST00000397204 NEMFO60524 1076 aa9.66□□□□□ -0.86
CAPN3-208ENST00000397204 C8AP07357 584 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms