RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 MLH1P40692 756 aa14.69□□□□□ -0.06
COL4A3-202ENST00000396578 AGBL2Q5U5Z8 902 aa14.69□□□□□ -0.06
COL4A3-202ENST00000396578 FAM20AQ96MK3 541 aa14.69□□□□□ -0.06
COL4A3-202ENST00000396578 BBS2Q9BXC9 721 aa14.69□□□□□ -0.06
COL4A3-202ENST00000396578 SLC16A4O15374 487 aa14.69□□□□□ -0.06
COL4A3-202ENST00000396578 LSP1P33241 339 aa14.69□□□□□ -0.06
COL4A3-202ENST00000396578 SGSM3Q96HU1 749 aa14.69□□□□□ -0.06
COL4A3-202ENST00000396578 RMDN3Q96TC7 470 aa14.69□□□□□ -0.06
COL4A3-202ENST00000396578 BBOX1O75936 387 aa14.69□□□□□ -0.06
COL4A3-202ENST00000396578 MYL3P08590 195 aa14.69□□□□□ -0.06
COL4A3-202ENST00000396578 SNAP25P60880 206 aa14.69□□□□□ -0.06
COL4A3-202ENST00000396578 LAMB3Q13751 1172 aa14.69□□□□□ -0.06
COL4A3-202ENST00000396578 FOPNLQ96NB1 174 aa14.69□□□□□ -0.06
COL4A3-202ENST00000396578 RSPH10B2B2RC85 870 aa14.69□□□□□ -0.06
COL4A3-202ENST00000396578 FKBP9O95302 570 aa14.69□□□□□ -0.06
COL4A3-202ENST00000396578 RSPH10BP0C881 870 aa14.69□□□□□ -0.06
COL4A3-202ENST00000396578 CASP1P29466 404 aa14.69□□□□□ -0.06
COL4A3-202ENST00000396578 PLA2G4AP47712 749 aa14.69□□□□□ -0.06
COL4A3-202ENST00000396578 ZNF200P98182 395 aaPredicted RBP14.69□□□□□ -0.06
COL4A3-202ENST00000396578 TRIP10Q15642 601 aa14.69□□□□□ -0.06
COL4A3-202ENST00000396578 FKBP9P1Q75LS8 142 aa14.69□□□□□ -0.06
COL4A3-202ENST00000396578 LRRC1Q9BTT6 524 aa14.69□□□□□ -0.06
COL4A3-202ENST00000396578 USP27XA6NNY8 438 aa14.68□□□□□ -0.06
COL4A3-202ENST00000396578 AIM2O14862 343 aa14.68□□□□□ -0.06
COL4A3-202ENST00000396578 BBS7Q8IWZ6 715 aa14.68□□□□□ -0.06
COL4A3-202ENST00000396578 CLMNQ96JQ2 1002 aa14.68□□□□□ -0.06
COL4A3-202ENST00000396578 DYRK4Q9NR20 520 aa14.68□□□□□ -0.06
COL4A3-202ENST00000396578 PLEKHG1Q9ULL1 1385 aa14.68□□□□□ -0.06
COL4A3-202ENST00000396578 SERPINB9P50453 376 aa14.68□□□□□ -0.06
COL4A3-202ENST00000396578 GPR162Q16538 588 aa14.68□□□□□ -0.06
COL4A3-202ENST00000396578 UGP2Q16851 508 aa14.68□□□□□ -0.06
COL4A3-202ENST00000396578 TTC39BQ5VTQ0 682 aaPredicted RBP14.68□□□□□ -0.06
COL4A3-202ENST00000396578 PID1Q7Z2X4 250 aa14.68□□□□□ -0.06
COL4A3-202ENST00000396578 DDX50Q9BQ39 737 aaKnown RBP14.68□□□□□ -0.06
COL4A3-202ENST00000396578 OSBPL10Q9BXB5 764 aa14.68□□□□□ -0.06
COL4A3-202ENST00000396578 PSD3Q9NYI0 1048 aa14.68□□□□□ -0.06
COL4A3-202ENST00000396578 RBAKQ9NYW8 714 aaPredicted RBP14.68□□□□□ -0.06
COL4A3-202ENST00000396578 LOC102724428A0A0B4J2F2 783 aa14.68□□□□□ -0.06
COL4A3-202ENST00000396578 IREB2P48200 963 aaKnown RBP14.68□□□□□ -0.06
COL4A3-202ENST00000396578 SIK1P57059 783 aa14.68□□□□□ -0.06
COL4A3-202ENST00000396578 SETD3Q86TU7 594 aaPredicted RBP14.68□□□□□ -0.06
COL4A3-202ENST00000396578 FLCNQ8NFG4 579 aa14.68□□□□□ -0.06
COL4A3-202ENST00000396578 TJP2Q9UDY2 1190 aa14.68□□□□□ -0.06
COL4A3-202ENST00000396578 PCDHB8Q9UN66 801 aa14.68□□□□□ -0.06
COL4A3-202ENST00000396578 LONRF1Q17RB8 773 aa14.68□□□□□ -0.06
COL4A3-202ENST00000396578 FGD2Q7Z6J4 655 aa14.68□□□□□ -0.06
COL4A3-202ENST00000396578 DBNDD1Q9H9R9 158 aa14.68□□□□□ -0.06
COL4A3-202ENST00000396578 XPO1O14980 1071 aaKnown RBP14.68□□□□□ -0.06
COL4A3-202ENST00000396578 EIF3DO15371 548 aaKnown RBP eCLIP14.68□□□□□ -0.06
COL4A3-202ENST00000396578 ALBP02768 609 aa14.68□□□□□ -0.06
COL4A3-202ENST00000396578 PRR29P0C7W0 189 aa14.68□□□□□ -0.06
COL4A3-202ENST00000396578 SFNP31947 248 aa14.68□□□□□ -0.06
COL4A3-202ENST00000396578 TPI1P60174 286 aa14.68□□□□□ -0.06
COL4A3-202ENST00000396578 RAD51Q06609 339 aa14.68□□□□□ -0.06
COL4A3-202ENST00000396578 NFX1Q12986 1120 aaKnown RBP14.68□□□□□ -0.06
COL4A3-202ENST00000396578 DUOXA2Q1HG44 320 aa14.68□□□□□ -0.06
COL4A3-202ENST00000396578 EPC1Q9H2F5 836 aa14.68□□□□□ -0.06
COL4A3-202ENST00000396578 CDY2AQ9Y6F7 541 aa14.68□□□□□ -0.06
COL4A3-202ENST00000396578 CDY1Q9Y6F8 540 aa14.68□□□□□ -0.06
COL4A3-202ENST00000396578 KYAT1Q16773 422 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 TERB1Q8NA31 727 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 PIK3R5Q8WYR1 880 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 MTERF3Q96E29 417 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 PPP1R2P1Q96PQ5 205 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 MARCOQ9UEW3 520 aaPredicted RBP14.67□□□□□ -0.06
COL4A3-202ENST00000396578 AP4S1Q9Y587 144 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 ABCB11O95342 1321 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 WDR19Q8NEZ3 1342 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 ZNF185O15231 689 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 ST13P50502 369 aaKnown RBP14.67□□□□□ -0.06
COL4A3-202ENST00000396578 VSNL1P62760 191 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 USPL1Q5W0Q7 1092 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 APPL2Q8NEU8 664 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 ERP27Q96DN0 273 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 ARHGEF26Q96DR7 871 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 CNDP1Q96KN2 507 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 EXOSC4Q9NPD3 245 aaKnown RBP14.67□□□□□ -0.06
COL4A3-202ENST00000396578 EMSYQ7Z589 1322 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 DGKHQ86XP1 1220 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 DDHD1Q8NEL9 900 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 PTPRN2Q92932 1015 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 SIK2Q9H0K1 926 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 POTECB2RU33 542 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 RNF103O00237 685 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 CAND2O75155 1236 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 PSMA3P25788 255 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 AP3M2P53677 418 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 RIBC1Q8N443 379 aaPredicted RBP14.67□□□□□ -0.06
COL4A3-202ENST00000396578 ELMO2Q96JJ3 720 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 AGPAT1Q99943 283 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 SH3GL1Q99961 368 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 NDEL1Q9GZM8 345 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 ZNF302Q9NR11 478 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 DBR1Q9UK59 544 aaKnown RBP14.67□□□□□ -0.06
COL4A3-202ENST00000396578 APPL1Q9UKG1 709 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 UBTFL6P0CB48 400 aaPredicted RBP14.67□□□□□ -0.06
COL4A3-202ENST00000396578 VHLP40337 213 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 ARHGAP17Q68EM7 881 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 DLGAP2Q9P1A6 1054 aa14.67□□□□□ -0.06
COL4A3-202ENST00000396578 ZC3H7BQ9UGR2 993 aaKnown RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms