RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 CCDC110Q8TBZ0 833 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 LMBR1Q8WVP7 490 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 SLC35C2Q9NQQ7 365 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 ALKBH4Q9NXW9 302 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 FEM1BQ9UK73 627 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 LIMCH1Q9UPQ0 1083 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 KIF21AQ7Z4S6 1674 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 CAPN5O15484 640 aaPredicted RBP3.86□□□□□ -1.79
XRN1-202ENST00000392981 GAS2O43903 313 aaKnown RBP3.86□□□□□ -1.79
XRN1-202ENST00000392981 RASAL1O95294 804 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 GMFBP60983 142 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 RPL11P62913 178 aaKnown RBP3.86□□□□□ -1.79
XRN1-202ENST00000392981 IFI35P80217 286 aaPredicted RBP3.86□□□□□ -1.79
XRN1-202ENST00000392981 ID3Q02535 119 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 TLE2Q04725 743 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 KLHL30Q0D2K2 578 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 SEC23AQ15436 765 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 LBX2Q6XYB7 198 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 FRMD1Q8N878 549 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 IL17REQ8NFR9 667 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 PPP1R9BQ96SB3 815 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 SLC30A3Q99726 388 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 MYL10Q9BUA6 226 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 TEX13BQ9BXU2 312 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 GRIP2Q9C0E4 1043 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 PNNQ9H307 717 aaKnown RBP3.86□□□□□ -1.79
XRN1-202ENST00000392981 CNTD2Q9H8S5 307 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 COPS7BQ9H9Q2 264 aaPredicted RBP3.86□□□□□ -1.79
XRN1-202ENST00000392981 MLXIPQ9HAP2 919 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 ACSS2Q9NR19 701 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 CHST7Q9NS84 486 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 TTLL8A6PVC2 850 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 H0YAE9 185 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 PPP6R2O75170 966 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 CRCPO75575 148 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 ZBTB48P10074 688 aaPredicted RBP3.86□□□□□ -1.79
XRN1-202ENST00000392981 ALDH18A1P54886 795 aaKnown RBP3.86□□□□□ -1.79
XRN1-202ENST00000392981 NR1H2P55055 460 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 IMMTQ16891 758 aaKnown RBP3.86□□□□□ -1.79
XRN1-202ENST00000392981 UTP14CQ5TAP6 766 aaKnown RBP3.86□□□□□ -1.79
XRN1-202ENST00000392981 NUTM2GQ5VZR2 741 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 SYAP1Q96A49 352 aaPredicted RBP3.86□□□□□ -1.79
XRN1-202ENST00000392981 RSRC1Q96IZ7 334 aaKnown RBP3.86□□□□□ -1.79
XRN1-202ENST00000392981 VPS39Q96JC1 886 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 CLMNQ96JQ2 1002 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 LDAHQ9H6V9 325 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 PCDHB16Q9NRJ7 776 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 PIH1D1Q9NWS0 290 aaKnown RBP3.86□□□□□ -1.79
XRN1-202ENST00000392981 AFF4Q9UHB7 1163 aaKnown RBP3.86□□□□□ -1.79
XRN1-202ENST00000392981 CBLCQ9ULV8 474 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 KIF3AQ9Y496 699 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 SPO11Q9Y5K1 396 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 GOLGA6L3A6NEY3 463 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 AREL1O15033 823 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 NOL3O60936 208 aaKnown RBP3.86□□□□□ -1.79
XRN1-202ENST00000392981 TSC22D2O75157 780 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 WEE2P0C1S8 567 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 CSH1P0DML2 217 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 CSH2P0DML3 217 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 TM4SF4P48230 202 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 CASP5P51878 434 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 FOXR1Q6PIV2 292 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 ANKLE2Q86XL3 938 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 MCUQ8NE86 351 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 NEK1Q96PY6 1258 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 EYA3Q99504 573 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 PRDM14Q9GZV8 571 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 TRMT1Q9NXH9 659 aaKnown RBP3.86□□□□□ -1.79
XRN1-202ENST00000392981 ATP23Q9Y6H3 246 aa3.86□□□□□ -1.79
XRN1-202ENST00000392981 TNPO2O14787 897 aaKnown RBP3.85□□□□□ -1.79
XRN1-202ENST00000392981 PROM1O43490 865 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 FGF18O76093 207 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 EGFRP00533 1210 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 GHRP10912 638 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 TLX1P31314 330 aaPredicted RBP3.85□□□□□ -1.79
XRN1-202ENST00000392981 SOX18P35713 384 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 RNF144AP50876 292 aaPredicted RBP3.85□□□□□ -1.79
XRN1-202ENST00000392981 NLRP5P59047 1200 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 GOLGA8FQ08AF8 430 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 TMED1Q13445 227 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 ZRSR1Q15695 479 aaKnown RBP3.85□□□□□ -1.79
XRN1-202ENST00000392981 FSCN1Q16658 493 aaKnown RBP3.85□□□□□ -1.79
XRN1-202ENST00000392981 SLC35G1Q2M3R5 365 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 FANCBQ8NB91 859 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 PRCCQ92733 491 aaPredicted RBP3.85□□□□□ -1.79
XRN1-202ENST00000392981 RAX2Q96IS3 184 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 FEM1CQ96JP0 617 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 PIMREGQ9BSJ6 248 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 YY1AP1Q9H869 796 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 FANCFQ9NPI8 374 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 PNPOQ9NVS9 261 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 TUBD1Q9UJT1 453 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 PA2G4Q9UQ80 394 aaKnown RBP3.85□□□□□ -1.79
XRN1-202ENST00000392981 PTPN22Q9Y2R2 807 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 IRS2Q9Y4H2 1338 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 A0A1B0GVC2 190 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 KRIT1O00522 736 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 PRPF4O43172 522 aaKnown RBP eCLIP3.85□□□□□ -1.79
XRN1-202ENST00000392981 MSX2P35548 267 aaPredicted RBP3.85□□□□□ -1.79
XRN1-202ENST00000392981 ASPAP45381 313 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms