RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 KCNJ1P48048 391 aa13.84□□□□□ -0.19
LCA5-202ENST00000392959 CORO7P57737 925 aa13.84□□□□□ -0.19
LCA5-202ENST00000392959 MED21Q13503 144 aa13.84□□□□□ -0.19
LCA5-202ENST00000392959 PTGISQ16647 500 aa13.84□□□□□ -0.19
LCA5-202ENST00000392959 DNAL1Q4LDG9 190 aa13.84□□□□□ -0.19
LCA5-202ENST00000392959 PDCD6IPQ8WUM4 868 aaKnown RBP13.84□□□□□ -0.19
LCA5-202ENST00000392959 ACAD9Q9H845 621 aa13.84□□□□□ -0.19
LCA5-202ENST00000392959 RAB6BQ9NRW1 208 aa13.84□□□□□ -0.19
LCA5-202ENST00000392959 ATP9BO43861 1147 aa13.83□□□□□ -0.19
LCA5-202ENST00000392959 MYBP10242 640 aa13.83□□□□□ -0.19
LCA5-202ENST00000392959 NFKBIAP25963 317 aa13.83□□□□□ -0.19
LCA5-202ENST00000392959 ADORA2BP29275 332 aa13.83□□□□□ -0.19
LCA5-202ENST00000392959 PLA2G4AP47712 749 aa13.83□□□□□ -0.19
LCA5-202ENST00000392959 STX3Q13277 289 aa13.83□□□□□ -0.19
LCA5-202ENST00000392959 IMPG1Q17R60 797 aa13.83□□□□□ -0.19
LCA5-202ENST00000392959 MTHFD1LQ6UB35 978 aa13.83□□□□□ -0.19
LCA5-202ENST00000392959 LONP2Q86WA8 852 aa13.83□□□□□ -0.19
LCA5-202ENST00000392959 CATSPER1Q8NEC5 780 aa13.83□□□□□ -0.19
LCA5-202ENST00000392959 RNF217Q8TC41 542 aa13.83□□□□□ -0.19
LCA5-202ENST00000392959 SYN2Q92777 582 aaPredicted RBP13.83□□□□□ -0.19
LCA5-202ENST00000392959 ATXN7L3BQ96GX2 97 aa13.83□□□□□ -0.19
LCA5-202ENST00000392959 EHD2Q9NZN4 543 aa13.83□□□□□ -0.19
LCA5-202ENST00000392959 ZC3H7BQ9UGR2 993 aaKnown RBP13.83□□□□□ -0.19
LCA5-202ENST00000392959 TFR2Q9UP52 801 aa13.83□□□□□ -0.19
LCA5-202ENST00000392959 SUGT1Q9Y2Z0 365 aa13.83□□□□□ -0.19
LCA5-202ENST00000392959 CNTNAP5Q8WYK1 1306 aa13.83□□□□□ -0.19
LCA5-202ENST00000392959 TARBP1Q13395 1621 aaKnown RBP13.83□□□□□ -0.19
LCA5-202ENST00000392959 KCNN4O15554 427 aa13.83□□□□□ -0.2
LCA5-202ENST00000392959 SLC26A4O43511 780 aa13.83□□□□□ -0.2
LCA5-202ENST00000392959 DNAJC6O75061 913 aa13.83□□□□□ -0.2
LCA5-202ENST00000392959 CCND1P24385 295 aa13.83□□□□□ -0.2
LCA5-202ENST00000392959 NME3Q13232 169 aa13.83□□□□□ -0.2
LCA5-202ENST00000392959 PNKPQ96T60 521 aa13.83□□□□□ -0.2
LCA5-202ENST00000392959 MKNK1Q9BUB5 465 aa13.83□□□□□ -0.2
LCA5-202ENST00000392959 TMEM247A6NEH6 219 aa13.83□□□□□ -0.2
LCA5-202ENST00000392959 PPP1R12AO14974 1030 aaPredicted RBP13.83□□□□□ -0.2
LCA5-202ENST00000392959 TSPY1Q01534 308 aa13.83□□□□□ -0.2
LCA5-202ENST00000392959 SNRNP35Q16560 246 aaKnown RBP13.83□□□□□ -0.2
LCA5-202ENST00000392959 ZNF710Q8N1W2 664 aa13.83□□□□□ -0.2
LCA5-202ENST00000392959 SNX19Q92543 992 aa13.83□□□□□ -0.2
LCA5-202ENST00000392959 GOLPH3Q9H4A6 298 aa13.83□□□□□ -0.2
LCA5-202ENST00000392959 KCND2Q9NZV8 630 aa13.83□□□□□ -0.2
LCA5-202ENST00000392959 H2AFXP16104 143 aaPredicted RBP13.83□□□□□ -0.2
LCA5-202ENST00000392959 SLC29A2Q14542 456 aa13.83□□□□□ -0.2
LCA5-202ENST00000392959 DALRD3Q5D0E6 543 aaKnown RBP13.83□□□□□ -0.2
LCA5-202ENST00000392959 LRRC8EQ6NSJ5 796 aa13.83□□□□□ -0.2
LCA5-202ENST00000392959 CNPY4Q8N129 248 aa13.83□□□□□ -0.2
LCA5-202ENST00000392959 LBHD1Q9BQE6 289 aaPredicted RBP13.83□□□□□ -0.2
LCA5-202ENST00000392959 SIK2Q9H0K1 926 aa13.83□□□□□ -0.2
LCA5-202ENST00000392959 SLC8A2Q9UPR5 921 aa13.83□□□□□ -0.2
LCA5-202ENST00000392959 A0A0G2JLW4 131 aa13.82□□□□□ -0.2
LCA5-202ENST00000392959 PDGFRAP16234 1089 aa13.82□□□□□ -0.2
LCA5-202ENST00000392959 IL10P22301 178 aa13.82□□□□□ -0.2
LCA5-202ENST00000392959 IFNA8P32881 189 aa13.82□□□□□ -0.2
LCA5-202ENST00000392959 TTLL4Q14679 1199 aa13.82□□□□□ -0.2
LCA5-202ENST00000392959 CNGA3Q16281 694 aa13.82□□□□□ -0.2
LCA5-202ENST00000392959 KLHDC7AQ5VTJ3 777 aa13.82□□□□□ -0.2
LCA5-202ENST00000392959 WDR93Q6P2C0 686 aa13.82□□□□□ -0.2
LCA5-202ENST00000392959 RNF149Q8NC42 400 aa13.82□□□□□ -0.2
LCA5-202ENST00000392959 SLC10A4Q96EP9 437 aa13.82□□□□□ -0.2
LCA5-202ENST00000392959 CARD9Q9H257 536 aa13.82□□□□□ -0.2
LCA5-202ENST00000392959 PCDHB2Q9Y5E7 798 aa13.82□□□□□ -0.2
LCA5-202ENST00000392959 MAGEA4P43358 317 aa13.82□□□□□ -0.2
LCA5-202ENST00000392959 ACOT2P49753 483 aa13.82□□□□□ -0.2
LCA5-202ENST00000392959 PTPAQ15257 358 aa13.82□□□□□ -0.2
LCA5-202ENST00000392959 SEPT12Q8IYM1 358 aa13.82□□□□□ -0.2
LCA5-202ENST00000392959 PGBD4Q96DM1 585 aa13.82□□□□□ -0.2
LCA5-202ENST00000392959 MTBPQ96DY7 904 aa13.82□□□□□ -0.2
LCA5-202ENST00000392959 SARS2Q9NP81 518 aaKnown RBP13.82□□□□□ -0.2
LCA5-202ENST00000392959 MARCOQ9UEW3 520 aaPredicted RBP13.82□□□□□ -0.2
LCA5-202ENST00000392959 FLT1P17948 1338 aa13.82□□□□□ -0.2
LCA5-202ENST00000392959 NDUFB10O96000 172 aa13.82□□□□□ -0.2
LCA5-202ENST00000392959 KRT4P19013 534 aa13.82□□□□□ -0.2
LCA5-202ENST00000392959 BARGINQ6ZT62 677 aa13.82□□□□□ -0.2
LCA5-202ENST00000392959 NOP9Q86U38 636 aaKnown RBP13.82□□□□□ -0.2
LCA5-202ENST00000392959 KIF12Q96FN5 646 aa13.82□□□□□ -0.2
LCA5-202ENST00000392959 JPH1Q9HDC5 661 aaPredicted RBP13.82□□□□□ -0.2
LCA5-202ENST00000392959 DAGLAQ9Y4D2 1042 aa13.82□□□□□ -0.2
LCA5-202ENST00000392959 GNAT1P11488 350 aa13.82□□□□□ -0.2
LCA5-202ENST00000392959 RFX5P48382 616 aaPredicted RBP13.82□□□□□ -0.2
LCA5-202ENST00000392959 ZNF200P98182 395 aaPredicted RBP13.82□□□□□ -0.2
LCA5-202ENST00000392959 MKRN4PQ13434 485 aaPredicted RBP13.82□□□□□ -0.2
LCA5-202ENST00000392959 KIF2BQ8N4N8 673 aa13.82□□□□□ -0.2
LCA5-202ENST00000392959 RBBP8NLQ8NC74 664 aaPredicted RBP13.82□□□□□ -0.2
LCA5-202ENST00000392959 ASPSCR1Q9BZE9 553 aa13.82□□□□□ -0.2
LCA5-202ENST00000392959 HACD3Q9P035 362 aa13.82□□□□□ -0.2
LCA5-202ENST00000392959 L1RE1Q9UN81 338 aa13.82□□□□□ -0.2
LCA5-202ENST00000392959 ERVK-24P63145 666 aa13.81□□□□□ -0.2
LCA5-202ENST00000392959 PIGHQ14442 188 aaPredicted RBP13.81□□□□□ -0.2
LCA5-202ENST00000392959 CYTH1Q15438 398 aa13.81□□□□□ -0.2
LCA5-202ENST00000392959 XKR3Q5GH77 459 aa13.81□□□□□ -0.2
LCA5-202ENST00000392959 MDH1BQ5I0G3 518 aa13.81□□□□□ -0.2
LCA5-202ENST00000392959 TRAPPC11Q7Z392 1133 aa13.81□□□□□ -0.2
LCA5-202ENST00000392959 CLEC10AQ8IUN9 316 aa13.81□□□□□ -0.2
LCA5-202ENST00000392959 ARHGEF26Q96DR7 871 aa13.81□□□□□ -0.2
LCA5-202ENST00000392959 CXorf56Q9H5V9 222 aa13.81□□□□□ -0.2
LCA5-202ENST00000392959 PXDNLA1KZ92 1463 aa13.81□□□□□ -0.2
LCA5-202ENST00000392959 E5RI56 91 aa13.81□□□□□ -0.2
LCA5-202ENST00000392959 RPA1P27694 616 aa13.81□□□□□ -0.2
LCA5-202ENST00000392959 SF3B3Q15393 1217 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms