RNA–Protein interactions for RNA: ENST00000390445.2

TRAV17-201, Transcript of T cell receptor alpha variable 17, humanhuman

APPRIS P1 BASIC

Gene TRAV17, Length 484 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17-201ENST00000390445 AGPAT5Q9NUQ2 364 aa9.31□□□□□ -0.92
TRAV17-201ENST00000390445 PUF60Q9UHX1 559 aaKnown RBP9.31□□□□□ -0.92
TRAV17-201ENST00000390445 PCDHB2Q9Y5E7 798 aa9.31□□□□□ -0.92
TRAV17-201ENST00000390445 NOTCH4Q99466 2003 aa9.31□□□□□ -0.92
TRAV17-201ENST00000390445 LOC730098B7Z3J9 87 aa9.3□□□□□ -0.92
TRAV17-201ENST00000390445 H3BM21 787 aa9.3□□□□□ -0.92
TRAV17-201ENST00000390445 TNFRSF10BO14763 440 aa9.3□□□□□ -0.92
TRAV17-201ENST00000390445 DKC1O60832 514 aaKnown RBP eCLIP9.3□□□□□ -0.92
TRAV17-201ENST00000390445 CLASP2O75122 1294 aaKnown RBP9.3□□□□□ -0.92
TRAV17-201ENST00000390445 ZNF623O75123 536 aa9.3□□□□□ -0.92
TRAV17-201ENST00000390445 DDHD2O94830 711 aa9.3□□□□□ -0.92
TRAV17-201ENST00000390445 BAG4O95429 457 aaKnown RBP9.3□□□□□ -0.92
TRAV17-201ENST00000390445 POMCP01189 267 aa9.3□□□□□ -0.92
TRAV17-201ENST00000390445 WEE2P0C1S8 567 aa9.3□□□□□ -0.92
TRAV17-201ENST00000390445 HOXA11P31270 313 aaPredicted RBP9.3□□□□□ -0.92
TRAV17-201ENST00000390445 TXKP42681 527 aa9.3□□□□□ -0.92
TRAV17-201ENST00000390445 SLC11A1P49279 550 aa9.3□□□□□ -0.92
TRAV17-201ENST00000390445 ALDH7A1P49419 539 aaKnown RBP9.3□□□□□ -0.92
TRAV17-201ENST00000390445 CDC42EP1Q00587 391 aa9.3□□□□□ -0.92
TRAV17-201ENST00000390445 SMC1AQ14683 1233 aaKnown RBP9.3□□□□□ -0.92
TRAV17-201ENST00000390445 CALCRLQ16602 461 aa9.3□□□□□ -0.92
TRAV17-201ENST00000390445 HERC4Q5GLZ8 1057 aaPredicted RBP9.3□□□□□ -0.92
TRAV17-201ENST00000390445 NOMO2Q5JPE7 1267 aa9.3□□□□□ -0.92
TRAV17-201ENST00000390445 PDE12Q6L8Q7 609 aaKnown RBP9.3□□□□□ -0.92
TRAV17-201ENST00000390445 TMEM184AQ6ZMB5 413 aa9.3□□□□□ -0.92
TRAV17-201ENST00000390445 LRRC69Q6ZNQ3 347 aa9.3□□□□□ -0.92
TRAV17-201ENST00000390445 SLFN12Q8IYM2 578 aa9.3□□□□□ -0.92
TRAV17-201ENST00000390445 PGBD3Q8N328 593 aa9.3□□□□□ -0.92
TRAV17-201ENST00000390445 MRPL43Q8N983 215 aaKnown RBP9.3□□□□□ -0.92
TRAV17-201ENST00000390445 RNF149Q8NC42 400 aa9.3□□□□□ -0.92
TRAV17-201ENST00000390445 ASAP3Q8TDY4 903 aa9.3□□□□□ -0.92
TRAV17-201ENST00000390445 TMEM169Q96HH4 297 aa9.3□□□□□ -0.92
TRAV17-201ENST00000390445 IGSF21Q96ID5 467 aa9.3□□□□□ -0.92
TRAV17-201ENST00000390445 CPB2Q96IY4 423 aa9.3□□□□□ -0.92
TRAV17-201ENST00000390445 NAP1L4Q99733 375 aaKnown RBP9.3□□□□□ -0.92
TRAV17-201ENST00000390445 JPH2Q9BR39 696 aaPredicted RBP9.3□□□□□ -0.92
TRAV17-201ENST00000390445 PHF7Q9BWX1 381 aaPredicted RBP9.3□□□□□ -0.92
TRAV17-201ENST00000390445 ZBP1Q9H171 429 aa9.3□□□□□ -0.92
TRAV17-201ENST00000390445 NUCKS1Q9H1E3 243 aaKnown RBP9.3□□□□□ -0.92
TRAV17-201ENST00000390445 TMEM60Q9H2L4 133 aa9.3□□□□□ -0.92
TRAV17-201ENST00000390445 ZSWIM4Q9H7M6 989 aa9.3□□□□□ -0.92
TRAV17-201ENST00000390445 TTC12Q9H892 705 aaPredicted RBP9.3□□□□□ -0.92
TRAV17-201ENST00000390445 BRMS1Q9HCU9 246 aa9.3□□□□□ -0.92
TRAV17-201ENST00000390445 NGRNQ9NPE2 291 aaKnown RBP9.3□□□□□ -0.92
TRAV17-201ENST00000390445 PCDHA12Q9UN75 941 aa9.3□□□□□ -0.92
TRAV17-201ENST00000390445 HCFC2Q9Y5Z7 792 aa9.3□□□□□ -0.92
TRAV17-201ENST00000390445 TCHHQ07283 1943 aa9.3□□□□□ -0.92
TRAV17-201ENST00000390445 MIA3Q5JRA6 1907 aa9.3□□□□□ -0.92
TRAV17-201ENST00000390445 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.29□□□□□ -0.92
TRAV17-201ENST00000390445 CDC14CA4D256 554 aa9.29□□□□□ -0.92
TRAV17-201ENST00000390445 TERTO14746 1132 aaKnown RBP9.29□□□□□ -0.92
TRAV17-201ENST00000390445 NEMFO60524 1076 aa9.29□□□□□ -0.92
TRAV17-201ENST00000390445 TSPAN1O60635 241 aa9.29□□□□□ -0.92
TRAV17-201ENST00000390445 CXCL14O95715 111 aa9.29□□□□□ -0.92
TRAV17-201ENST00000390445 SSBP05455 408 aaKnown RBP eCLIP9.29□□□□□ -0.92
TRAV17-201ENST00000390445 GALTP07902 379 aa9.29□□□□□ -0.92
TRAV17-201ENST00000390445 EPCAMP16422 314 aa9.29□□□□□ -0.92
TRAV17-201ENST00000390445 RAB27AP51159 221 aa9.29□□□□□ -0.92
TRAV17-201ENST00000390445 RNASELQ05823 741 aaKnown RBP9.29□□□□□ -0.92
TRAV17-201ENST00000390445 MTMR3Q13615 1198 aa9.29□□□□□ -0.92
TRAV17-201ENST00000390445 CBX2Q14781 532 aaPredicted RBP9.29□□□□□ -0.92
TRAV17-201ENST00000390445 GLB1LQ6UWU2 654 aa9.29□□□□□ -0.92
TRAV17-201ENST00000390445 OTUD6AQ7L8S5 288 aa9.29□□□□□ -0.92
TRAV17-201ENST00000390445 SRGAP1Q7Z6B7 1085 aa9.29□□□□□ -0.92
TRAV17-201ENST00000390445 CDR2LQ86X02 465 aaPredicted RBP9.29□□□□□ -0.92
TRAV17-201ENST00000390445 CCDC83Q8IWF9 413 aa9.29□□□□□ -0.92
TRAV17-201ENST00000390445 VWA5B2Q8N398 1253 aa9.29□□□□□ -0.92
TRAV17-201ENST00000390445 C12orf76Q8N812 135 aaPredicted RBP9.29□□□□□ -0.92
TRAV17-201ENST00000390445 SMG8Q8ND04 991 aaKnown RBP9.29□□□□□ -0.92
TRAV17-201ENST00000390445 PIGOQ8TEQ8 1089 aa9.29□□□□□ -0.92
TRAV17-201ENST00000390445 TCP11Q8WWU5 503 aa9.29□□□□□ -0.92
TRAV17-201ENST00000390445 SUSD3Q96L08 255 aa9.29□□□□□ -0.92
TRAV17-201ENST00000390445 MTMR9Q96QG7 549 aa9.29□□□□□ -0.92
TRAV17-201ENST00000390445 HSD17B14Q9BPX1 270 aa9.29□□□□□ -0.92
TRAV17-201ENST00000390445 EIF2AQ9BY44 585 aaKnown RBP9.29□□□□□ -0.92
TRAV17-201ENST00000390445 RSAD1Q9HA92 442 aa9.29□□□□□ -0.92
TRAV17-201ENST00000390445 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.29□□□□□ -0.92
TRAV17-201ENST00000390445 HES2Q9Y543 173 aa9.29□□□□□ -0.92
TRAV17-201ENST00000390445 GPC6Q9Y625 555 aaPredicted RBP9.29□□□□□ -0.92
TRAV17-201ENST00000390445 DNMT3AQ9Y6K1 912 aaPredicted RBP9.29□□□□□ -0.92
TRAV17-201ENST00000390445 F8W810 466 aa9.28□□□□□ -0.92
TRAV17-201ENST00000390445 INO80B-WBP1J3KQ70 363 aa9.28□□□□□ -0.92
TRAV17-201ENST00000390445 B4GALT5O43286 388 aa9.28□□□□□ -0.92
TRAV17-201ENST00000390445 MED24O75448 989 aa9.28□□□□□ -0.92
TRAV17-201ENST00000390445 ERLIN2O94905 339 aa9.28□□□□□ -0.92
TRAV17-201ENST00000390445 SRGAP2BP0DMP2 458 aa9.28□□□□□ -0.92
TRAV17-201ENST00000390445 CTSAP10619 480 aa9.28□□□□□ -0.92
TRAV17-201ENST00000390445 GLRA2P23416 452 aa9.28□□□□□ -0.92
TRAV17-201ENST00000390445 MCM7P33993 719 aa9.28□□□□□ -0.92
TRAV17-201ENST00000390445 RARRES1P49788 294 aa9.28□□□□□ -0.92
TRAV17-201ENST00000390445 PTENP60484 403 aa9.28□□□□□ -0.92
TRAV17-201ENST00000390445 MBTD1Q05BQ5 628 aa9.28□□□□□ -0.92
TRAV17-201ENST00000390445 ZNF211Q13398 564 aaPredicted RBP9.28□□□□□ -0.92
TRAV17-201ENST00000390445 CAPSQ13938 189 aa9.28□□□□□ -0.92
TRAV17-201ENST00000390445 TRIM29Q14134 588 aa9.28□□□□□ -0.92
TRAV17-201ENST00000390445 EFHC2Q5JST6 749 aa9.28□□□□□ -0.92
TRAV17-201ENST00000390445 RARS2Q5T160 578 aaKnown RBP9.28□□□□□ -0.92
TRAV17-201ENST00000390445 MAEAQ7L5Y9 396 aa9.28□□□□□ -0.92
TRAV17-201ENST00000390445 MRPL10Q7Z7H8 261 aaKnown RBP9.28□□□□□ -0.92
TRAV17-201ENST00000390445 DDX53Q86TM3 631 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms