RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 ATP1A1P05023 1023 aaKnown RBP18.91■□□□□ 0.62
CLSTN1-202ENST00000377298 ACADSBP45954 432 aa18.91■□□□□ 0.62
CLSTN1-202ENST00000377298 DDR1Q08345 913 aa18.91■□□□□ 0.62
CLSTN1-202ENST00000377298 FBXL16Q8N461 479 aa18.91■□□□□ 0.62
CLSTN1-202ENST00000377298 HAUS8Q9BT25 410 aa18.91■□□□□ 0.62
CLSTN1-202ENST00000377298 FIS1Q9Y3D6 152 aa18.91■□□□□ 0.62
CLSTN1-202ENST00000377298 PPP1R3GB7ZBB8 358 aa18.91■□□□□ 0.62
CLSTN1-202ENST00000377298 RASA4BC9J798 803 aa18.91■□□□□ 0.62
CLSTN1-202ENST00000377298 RASA4O43374 803 aa18.91■□□□□ 0.62
CLSTN1-202ENST00000377298 SULT1E1P49888 294 aa18.91■□□□□ 0.62
CLSTN1-202ENST00000377298 FXR1P51114 621 aaKnown RBP eCLIP18.91■□□□□ 0.62
CLSTN1-202ENST00000377298 TPI1P60174 286 aa18.91■□□□□ 0.62
CLSTN1-202ENST00000377298 SLC35G2Q8TBE7 412 aa18.91■□□□□ 0.62
CLSTN1-202ENST00000377298 SH3TC2Q8TF17 1288 aa18.91■□□□□ 0.62
CLSTN1-202ENST00000377298 CPA5Q8WXQ8 436 aa18.91■□□□□ 0.62
CLSTN1-202ENST00000377298 CXCL11O14625 94 aa18.9■□□□□ 0.62
CLSTN1-202ENST00000377298 SLC26A2P50443 739 aa18.9■□□□□ 0.62
CLSTN1-202ENST00000377298 DACT2Q5SW24 774 aa18.9■□□□□ 0.62
CLSTN1-202ENST00000377298 FKBP1CQ5VVH2 108 aa18.9■□□□□ 0.62
CLSTN1-202ENST00000377298 SLC30A5Q8TAD4 765 aa18.9■□□□□ 0.62
CLSTN1-202ENST00000377298 Q9H521 79 aa18.9■□□□□ 0.62
CLSTN1-202ENST00000377298 NEMP1O14524 444 aa18.9■□□□□ 0.62
CLSTN1-202ENST00000377298 ARP10275 920 aa18.9■□□□□ 0.62
CLSTN1-202ENST00000377298 SKIP12755 728 aa18.9■□□□□ 0.62
CLSTN1-202ENST00000377298 RASGRP2Q7LDG7 609 aa18.9■□□□□ 0.62
CLSTN1-202ENST00000377298 ATL2Q8NHH9 583 aa18.9■□□□□ 0.62
CLSTN1-202ENST00000377298 RUSC1Q9BVN2 902 aa18.9■□□□□ 0.62
CLSTN1-202ENST00000377298 AGXT2Q9BYV1 514 aa18.9■□□□□ 0.62
CLSTN1-202ENST00000377298 EPS15L1Q9UBC2 864 aa18.9■□□□□ 0.62
CLSTN1-202ENST00000377298 MOSPD1Q9UJG1 213 aa18.9■□□□□ 0.62
CLSTN1-202ENST00000377298 SNX12Q9UMY4 172 aa18.9■□□□□ 0.62
CLSTN1-202ENST00000377298 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.9■□□□□ 0.62
CLSTN1-202ENST00000377298 USP27XA6NNY8 438 aa18.9■□□□□ 0.62
CLSTN1-202ENST00000377298 FOXP2O15409 715 aa18.9■□□□□ 0.62
CLSTN1-202ENST00000377298 MED24O75448 989 aa18.9■□□□□ 0.62
CLSTN1-202ENST00000377298 MMS22LQ6ZRQ5 1243 aa18.9■□□□□ 0.62
CLSTN1-202ENST00000377298 ATP11CQ8NB49 1132 aa18.9■□□□□ 0.62
CLSTN1-202ENST00000377298 ZNF235Q14590 738 aa18.9■□□□□ 0.62
CLSTN1-202ENST00000377298 ERGIC2Q96RQ1 377 aa18.9■□□□□ 0.62
CLSTN1-202ENST00000377298 PDGFRBP09619 1106 aa18.89■□□□□ 0.62
CLSTN1-202ENST00000377298 DRP2Q13474 957 aa18.89■□□□□ 0.62
CLSTN1-202ENST00000377298 PID1Q7Z2X4 250 aa18.89■□□□□ 0.62
CLSTN1-202ENST00000377298 CRLF3Q8IUI8 442 aa18.89■□□□□ 0.62
CLSTN1-202ENST00000377298 DNERQ8NFT8 737 aa18.89■□□□□ 0.62
CLSTN1-202ENST00000377298 C1orf54Q8WWF1 131 aa18.89■□□□□ 0.62
CLSTN1-202ENST00000377298 SYN2Q92777 582 aaPredicted RBP18.89■□□□□ 0.62
CLSTN1-202ENST00000377298 PXMP2Q9NR77 195 aa18.89■□□□□ 0.62
CLSTN1-202ENST00000377298 MRFAP1Q9Y605 127 aa18.89■□□□□ 0.62
CLSTN1-202ENST00000377298 KPNA7A9QM74 516 aa18.89■□□□□ 0.61
CLSTN1-202ENST00000377298 HSPA4LO95757 839 aa18.89■□□□□ 0.61
CLSTN1-202ENST00000377298 MX2P20592 715 aa18.89■□□□□ 0.61
CLSTN1-202ENST00000377298 NAMPTP43490 491 aa18.89■□□□□ 0.61
CLSTN1-202ENST00000377298 RGS7P49802 495 aa18.89■□□□□ 0.61
CLSTN1-202ENST00000377298 SYDE1Q6ZW31 735 aaPredicted RBP18.89■□□□□ 0.61
CLSTN1-202ENST00000377298 EIF3EP60228 445 aaKnown RBP18.89■□□□□ 0.61
CLSTN1-202ENST00000377298 SNX17Q15036 470 aa18.89■□□□□ 0.61
CLSTN1-202ENST00000377298 KLHDC7AQ5VTJ3 777 aa18.89■□□□□ 0.61
CLSTN1-202ENST00000377298 CC2D1AQ6P1N0 951 aaPredicted RBP18.89■□□□□ 0.61
CLSTN1-202ENST00000377298 GPC2Q8N158 579 aa18.89■□□□□ 0.61
CLSTN1-202ENST00000377298 SPATA4Q8NEY3 305 aa18.89■□□□□ 0.61
CLSTN1-202ENST00000377298 UBQLN1Q9UMX0 589 aaKnown RBP18.89■□□□□ 0.61
CLSTN1-202ENST00000377298 WNT10BO00744 389 aa18.89■□□□□ 0.61
CLSTN1-202ENST00000377298 NPTXRO95502 500 aa18.89■□□□□ 0.61
CLSTN1-202ENST00000377298 RPLP2P05387 115 aaKnown RBP18.89■□□□□ 0.61
CLSTN1-202ENST00000377298 PDIA2Q13087 525 aaKnown RBP18.89■□□□□ 0.61
CLSTN1-202ENST00000377298 NTRK3Q16288 839 aa18.89■□□□□ 0.61
CLSTN1-202ENST00000377298 TMTC4Q5T4D3 741 aa18.89■□□□□ 0.61
CLSTN1-202ENST00000377298 IZUMO3Q5VZ72 239 aa18.89■□□□□ 0.61
CLSTN1-202ENST00000377298 PDCD2LQ9BRP1 358 aa18.89■□□□□ 0.61
CLSTN1-202ENST00000377298 CTIFO43310 598 aaKnown RBP18.88■□□□□ 0.61
CLSTN1-202ENST00000377298 DDNO94850 711 aaPredicted RBP18.88■□□□□ 0.61
CLSTN1-202ENST00000377298 SLC12A1Q13621 1099 aa18.88■□□□□ 0.61
CLSTN1-202ENST00000377298 WDR75Q8IWA0 830 aaKnown RBP18.88■□□□□ 0.61
CLSTN1-202ENST00000377298 CD302Q8IX05 232 aa18.88■□□□□ 0.61
CLSTN1-202ENST00000377298 SYTL5Q8TDW5 730 aaPredicted RBP18.88■□□□□ 0.61
CLSTN1-202ENST00000377298 TXLNGQ9NUQ3 528 aa18.88■□□□□ 0.61
CLSTN1-202ENST00000377298 MORC2Q9Y6X9 1032 aaPredicted RBP18.88■□□□□ 0.61
CLSTN1-202ENST00000377298 OGTO15294 1046 aa18.88■□□□□ 0.61
CLSTN1-202ENST00000377298 CYBBP04839 570 aa18.88■□□□□ 0.61
CLSTN1-202ENST00000377298 DSG3P32926 999 aa18.88■□□□□ 0.61
CLSTN1-202ENST00000377298 CASP2P42575 452 aa18.88■□□□□ 0.61
CLSTN1-202ENST00000377298 ASIC4Q96FT7 647 aa18.88■□□□□ 0.61
CLSTN1-202ENST00000377298 TACO1Q9BSH4 297 aaKnown RBP18.88■□□□□ 0.61
CLSTN1-202ENST00000377298 TMPRSS15P98073 1019 aa18.88■□□□□ 0.61
CLSTN1-202ENST00000377298 NUDT18Q6ZVK8 323 aa18.88■□□□□ 0.61
CLSTN1-202ENST00000377298 FRA10AC1Q70Z53 315 aa18.88■□□□□ 0.61
CLSTN1-202ENST00000377298 ZC3H18Q86VM9 953 aaKnown RBP18.88■□□□□ 0.61
CLSTN1-202ENST00000377298 PPM1NQ8N819 430 aa18.88■□□□□ 0.61
CLSTN1-202ENST00000377298 TTC8Q8TAM2 541 aa18.88■□□□□ 0.61
CLSTN1-202ENST00000377298 TTC17Q96AE7 1141 aa18.88■□□□□ 0.61
CLSTN1-202ENST00000377298 OPTNQ96CV9 577 aa18.88■□□□□ 0.61
CLSTN1-202ENST00000377298 HPDLQ96IR7 371 aa18.88■□□□□ 0.61
CLSTN1-202ENST00000377298 LSM7Q9UK45 103 aaKnown RBP18.88■□□□□ 0.61
CLSTN1-202ENST00000377298 PRAMEP78395 509 aa18.88■□□□□ 0.61
CLSTN1-202ENST00000377298 NUGGCQ68CJ6 796 aa18.88■□□□□ 0.61
CLSTN1-202ENST00000377298 FAM96AQ9H5X1 160 aa18.88■□□□□ 0.61
CLSTN1-202ENST00000377298 SPATC1LQ9H0A9 340 aa18.87■□□□□ 0.61
CLSTN1-202ENST00000377298 AP3B1O00203 1094 aa18.87■□□□□ 0.61
CLSTN1-202ENST00000377298 NFIBO00712 420 aa18.87■□□□□ 0.61
CLSTN1-202ENST00000377298 PGK2P07205 417 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms