RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 CETN1Q12798 172 aa17.58■□□□□ 0.41
TRIM39-201ENST00000376656 AP1ARQ63HQ0 302 aa17.58■□□□□ 0.41
TRIM39-201ENST00000376656 CEP120Q8N960 986 aa17.58■□□□□ 0.41
TRIM39-201ENST00000376656 SYT15Q9BQS2 421 aa17.58■□□□□ 0.41
TRIM39-201ENST00000376656 GAS8O95995 478 aa17.58■□□□□ 0.4
TRIM39-201ENST00000376656 FOSP01100 380 aaPredicted RBP17.58■□□□□ 0.4
TRIM39-201ENST00000376656 LMNTD2Q8IXW0 634 aa17.58■□□□□ 0.4
TRIM39-201ENST00000376656 PPM1KQ8N3J5 372 aa17.58■□□□□ 0.4
TRIM39-201ENST00000376656 ENDOVQ8N8Q3 282 aaKnown RBP17.58■□□□□ 0.4
TRIM39-201ENST00000376656 CNBD1Q8NA66 436 aa17.58■□□□□ 0.4
TRIM39-201ENST00000376656 ARHGEF1Q92888 912 aaKnown RBP17.58■□□□□ 0.4
TRIM39-201ENST00000376656 DENND2DQ9H6A0 471 aaPredicted RBP17.58■□□□□ 0.4
TRIM39-201ENST00000376656 LRRC4BQ9NT99 713 aa17.58■□□□□ 0.4
TRIM39-201ENST00000376656 UVRAGQ9P2Y5 699 aa17.58■□□□□ 0.4
TRIM39-201ENST00000376656 POLLQ9UGP5 575 aa17.58■□□□□ 0.4
TRIM39-201ENST00000376656 MAGEB2O15479 319 aa17.57■□□□□ 0.4
TRIM39-201ENST00000376656 FESP07332 822 aa17.57■□□□□ 0.4
TRIM39-201ENST00000376656 POTEJP0CG39 1038 aa17.57■□□□□ 0.4
TRIM39-201ENST00000376656 CAV1Q03135 178 aa17.57■□□□□ 0.4
TRIM39-201ENST00000376656 STAT4Q14765 748 aa17.57■□□□□ 0.4
TRIM39-201ENST00000376656 GNPTABQ3T906 1256 aa17.57■□□□□ 0.4
TRIM39-201ENST00000376656 CBWD1Q9BRT8 395 aa17.57■□□□□ 0.4
TRIM39-201ENST00000376656 ZNFX1Q9P2E3 1918 aaKnown RBP17.57■□□□□ 0.4
TRIM39-201ENST00000376656 ADRA2BP18089 450 aa17.57■□□□□ 0.4
TRIM39-201ENST00000376656 SYDE1Q6ZW31 735 aaPredicted RBP17.57■□□□□ 0.4
TRIM39-201ENST00000376656 DCAF4Q8WV16 495 aa17.57■□□□□ 0.4
TRIM39-201ENST00000376656 ELMO3Q96BJ8 720 aa17.57■□□□□ 0.4
TRIM39-201ENST00000376656 CCDC77Q9BR77 488 aa17.57■□□□□ 0.4
TRIM39-201ENST00000376656 PLVAPQ9BX97 442 aa17.57■□□□□ 0.4
TRIM39-201ENST00000376656 HEMGNQ9BXL5 484 aa17.57■□□□□ 0.4
TRIM39-201ENST00000376656 SMCHD1A6NHR9 2005 aa17.57■□□□□ 0.4
TRIM39-201ENST00000376656 GSTTP1A0A1W2PQM5 241 aa17.57■□□□□ 0.4
TRIM39-201ENST00000376656 GCAP28676 217 aa17.57■□□□□ 0.4
TRIM39-201ENST00000376656 MXRA7P84157 204 aa17.57■□□□□ 0.4
TRIM39-201ENST00000376656 IKQ13123 557 aaPredicted RBP17.57■□□□□ 0.4
TRIM39-201ENST00000376656 DAB2IPQ5VWQ8 1189 aa17.57■□□□□ 0.4
TRIM39-201ENST00000376656 PHLDB2Q86SQ0 1253 aa17.57■□□□□ 0.4
TRIM39-201ENST00000376656 TRABD2AQ86V40 505 aa17.57■□□□□ 0.4
TRIM39-201ENST00000376656 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.57■□□□□ 0.4
TRIM39-201ENST00000376656 DAW1Q8N136 415 aa17.57■□□□□ 0.4
TRIM39-201ENST00000376656 DENND1AQ8TEH3 1009 aa17.57■□□□□ 0.4
TRIM39-201ENST00000376656 STRA6Q9BX79 667 aa17.57■□□□□ 0.4
TRIM39-201ENST00000376656 ANAPC7Q9UJX3 599 aa17.57■□□□□ 0.4
TRIM39-201ENST00000376656 K7ENM7 598 aa17.56■□□□□ 0.4
TRIM39-201ENST00000376656 AHCYL1O43865 530 aa17.56■□□□□ 0.4
TRIM39-201ENST00000376656 AP1G2O75843 785 aa17.56■□□□□ 0.4
TRIM39-201ENST00000376656 CALCAP01258 141 aa17.56■□□□□ 0.4
TRIM39-201ENST00000376656 GRIPAP1Q4V328 841 aa17.56■□□□□ 0.4
TRIM39-201ENST00000376656 IZUMO3Q5VZ72 239 aa17.56■□□□□ 0.4
TRIM39-201ENST00000376656 ZFPM1Q8IX07 1006 aa17.56■□□□□ 0.4
TRIM39-201ENST00000376656 ATL2Q8NHH9 583 aa17.56■□□□□ 0.4
TRIM39-201ENST00000376656 GRK7Q8WTQ7 553 aa17.56■□□□□ 0.4
TRIM39-201ENST00000376656 C10orf82Q8WW14 230 aa17.56■□□□□ 0.4
TRIM39-201ENST00000376656 VTI1AQ96AJ9 217 aa17.56■□□□□ 0.4
TRIM39-201ENST00000376656 TMEM117Q9H0C3 514 aa17.56■□□□□ 0.4
TRIM39-201ENST00000376656 LRRD1A4D1F6 860 aa17.56■□□□□ 0.4
TRIM39-201ENST00000376656 PSMD10O75832 226 aa17.56■□□□□ 0.4
TRIM39-201ENST00000376656 DCTN3O75935 186 aa17.56■□□□□ 0.4
TRIM39-201ENST00000376656 CYP11B1P15538 503 aa17.56■□□□□ 0.4
TRIM39-201ENST00000376656 MRPS35P82673 323 aaKnown RBP17.56■□□□□ 0.4
TRIM39-201ENST00000376656 TSC22D3Q99576 134 aa17.56■□□□□ 0.4
TRIM39-201ENST00000376656 NEU2Q9Y3R4 380 aa17.56■□□□□ 0.4
TRIM39-201ENST00000376656 EDF1O60869 148 aaKnown RBP17.55■□□□□ 0.4
TRIM39-201ENST00000376656 NEFHP12036 1026 aa17.55■□□□□ 0.4
TRIM39-201ENST00000376656 SCNN1DP51172 638 aa17.55■□□□□ 0.4
TRIM39-201ENST00000376656 NFIAQ12857 509 aa17.55■□□□□ 0.4
TRIM39-201ENST00000376656 C4orf33Q8N1A6 199 aa17.55■□□□□ 0.4
TRIM39-201ENST00000376656 DNAJC9Q8WXX5 260 aa17.55■□□□□ 0.4
TRIM39-201ENST00000376656 RPGRQ92834 1020 aaKnown RBP17.55■□□□□ 0.4
TRIM39-201ENST00000376656 PIDD1Q9HB75 910 aa17.55■□□□□ 0.4
TRIM39-201ENST00000376656 NRAPQ86VF7 1730 aa17.55■□□□□ 0.4
TRIM39-201ENST00000376656 SMIM24O75264 130 aa17.55■□□□□ 0.4
TRIM39-201ENST00000376656 SNUPNO95149 360 aaKnown RBP17.55■□□□□ 0.4
TRIM39-201ENST00000376656 GNAT1P11488 350 aa17.55■□□□□ 0.4
TRIM39-201ENST00000376656 MAPK4P31152 587 aa17.55■□□□□ 0.4
TRIM39-201ENST00000376656 MAN1A1P33908 653 aa17.55■□□□□ 0.4
TRIM39-201ENST00000376656 SPARCL1Q14515 664 aa17.55■□□□□ 0.4
TRIM39-201ENST00000376656 TAF1BQ53T94 588 aaPredicted RBP17.55■□□□□ 0.4
TRIM39-201ENST00000376656 WASHC2DQ5SRD0 308 aa17.55■□□□□ 0.4
TRIM39-201ENST00000376656 SLC30A9Q6PML9 568 aa17.55■□□□□ 0.4
TRIM39-201ENST00000376656 EXOC1LA0A1B0GW35 172 aa17.55■□□□□ 0.4
TRIM39-201ENST00000376656 HLA-DOAP06340 250 aa17.55■□□□□ 0.4
TRIM39-201ENST00000376656 CYP3A4P08684 503 aa17.55■□□□□ 0.4
TRIM39-201ENST00000376656 ALDH3A1P30838 453 aa17.55■□□□□ 0.4
TRIM39-201ENST00000376656 MAGEA4P43358 317 aa17.55■□□□□ 0.4
TRIM39-201ENST00000376656 MXI1P50539 228 aa17.55■□□□□ 0.4
TRIM39-201ENST00000376656 UBXN2AP68543 259 aa17.55■□□□□ 0.4
TRIM39-201ENST00000376656 PKN2Q16513 984 aaKnown RBP17.55■□□□□ 0.4
TRIM39-201ENST00000376656 TMEM154Q6P9G4 183 aa17.55■□□□□ 0.4
TRIM39-201ENST00000376656 SIAH1Q8IUQ4 282 aa17.55■□□□□ 0.4
TRIM39-201ENST00000376656 CERS5Q8N5B7 392 aa17.55■□□□□ 0.4
TRIM39-201ENST00000376656 KCTD17Q8N5Z5 321 aa17.55■□□□□ 0.4
TRIM39-201ENST00000376656 SEMA4DQ92854 862 aa17.55■□□□□ 0.4
TRIM39-201ENST00000376656 RBM15Q96T37 977 aaKnown RBP eCLIP17.55■□□□□ 0.45e-6■■□□□ 11.5
TRIM39-201ENST00000376656 ADAM33Q9BZ11 813 aa17.55■□□□□ 0.4
TRIM39-201ENST00000376656 TRABDQ9H4I3 376 aa17.55■□□□□ 0.4
TRIM39-201ENST00000376656 KIAA1586Q9HCI6 787 aa17.55■□□□□ 0.4
TRIM39-201ENST00000376656 USP20Q9Y2K6 914 aa17.55■□□□□ 0.4
TRIM39-201ENST00000376656 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.55■□□□□ 0.4
TRIM39-201ENST00000376656 POC1B-GALNT4F8VUJ3 575 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms