RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 SPECC1Q5M775 1068 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 ADALQ6DHV7 355 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 MCTP2Q6DN12 878 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 PPP4R3AQ6IN85 833 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 CYP4F22Q6NT55 531 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 SHC4Q6S5L8 630 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 RNF207Q6ZRF8 634 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 VSIG10LQ86VR7 867 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 TEX2Q8IWB9 1127 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 C19orf47Q8N9M1 422 aaKnown RBP3.99□□□□□ -1.77
MCF2-202ENST00000370573 CHST13Q8NET6 341 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 ENGASEQ8NFI3 743 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 IL31RAQ8NI17 732 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 HAS1Q92839 578 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 GJA10Q969M2 543 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 LENG9Q96B70 501 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 HHIPL1Q96JK4 782 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 MBOAT7Q96N66 472 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 MTMR9Q96QG7 549 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 UIMC1Q96RL1 719 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 PORCNQ9H237 461 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 ACAD9Q9H845 621 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 A1CFQ9NQ94 594 aaKnown RBP3.99□□□□□ -1.77
MCF2-202ENST00000370573 PRDM10Q9NQV6 1147 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 CYP39A1Q9NYL5 469 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 DDX49Q9Y6V7 483 aaKnown RBP3.99□□□□□ -1.77
MCF2-202ENST00000370573 ASTN1O14525 1302 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 ADGRA2Q96PE1 1338 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 IGLV3-22A0A075B6J6 115 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 FAM237AA0A1B0GTK4 181 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 A0A1B0GVL5 298 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 A0A1W2PQ27 194 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 A0A1W2PQ64 194 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 A0A1W2PQD8 194 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 FAM86C2PA6NEL3 165 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 FAM86B1E9PN63 330 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 ATE1O95260 518 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 FAM86B2P0C5J1 330 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 IMPDH2P12268 514 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 PTMSP20962 102 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 CMA1P23946 247 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 GUCY2CP25092 1073 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 DEKP35659 375 aaKnown RBP3.98□□□□□ -1.77
MCF2-202ENST00000370573 TM4SF4P48230 202 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 EPHB1P54762 984 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 MRPS9P82933 396 aaKnown RBP3.98□□□□□ -1.77
MCF2-202ENST00000370573 CNTN2Q02246 1040 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 SNW1Q13573 536 aaKnown RBP3.98□□□□□ -1.77
MCF2-202ENST00000370573 KLHL40Q2TBA0 621 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 SKOR2Q2VWA4 1001 aaPredicted RBP3.98□□□□□ -1.77
MCF2-202ENST00000370573 RESP18Q5W5W9 173 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 ARMCX6Q7L4S7 300 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 HDXQ7Z353 690 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 SAMD3Q8N6K7 520 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 ANKRD13CQ8N6S4 541 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 FSIP1Q8NA03 581 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 NETO1Q8TDF5 533 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 BCL7CQ8WUZ0 217 aaPredicted RBP3.98□□□□□ -1.77
MCF2-202ENST00000370573 KISS1RQ969F8 398 aaPredicted RBP3.98□□□□□ -1.77
MCF2-202ENST00000370573 FGD4Q96M96 766 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 MPHOSPH6Q99547 160 aaKnown RBP3.98□□□□□ -1.77
MCF2-202ENST00000370573 KRTAP9-2Q9BYQ4 174 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 CSRNP2Q9H175 543 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 PAK6Q9NQU5 681 aaPredicted RBP3.98□□□□□ -1.77
MCF2-202ENST00000370573 MAP3K20Q9NYL2 800 aaKnown RBP3.98□□□□□ -1.77
MCF2-202ENST00000370573 ZIM2Q9NZV7 527 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 MORF4L1Q9UBU8 362 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 CEP131Q9UPN4 1083 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 SLC5A6Q9Y289 635 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 CORINQ9Y5Q5 1042 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 FRMPD4Q14CM0 1322 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 VWA3AA6NCI4 1184 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 RASSF10A6NK89 507 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 MEIS1O00470 390 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 AKAP10O43572 662 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 SLC25A27O95847 323 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 BMP15O95972 392 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 PRNPP04156 253 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 OR52Z1P0C646 297 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 ITGB5P18084 799 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 NDUFA8P51970 172 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 HTRA3P83110 453 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 GRM1Q13255 1194 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 ORC2Q13416 577 aaPredicted RBP3.98□□□□□ -1.77
MCF2-202ENST00000370573 MTMR1Q13613 665 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 DEFB115Q30KQ5 88 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 Q4G0T1 1027 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 CT47A1Q5JQC4 288 aaPredicted RBP3.98□□□□□ -1.77
MCF2-202ENST00000370573 FAM209AQ5JX71 171 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 ARL6IP4Q66PJ3 421 aaKnown RBP3.98□□□□□ -1.77
MCF2-202ENST00000370573 MOXD1Q6UVY6 613 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 GPRC5AQ8NFJ5 357 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 RIN3Q8TB24 985 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 ETNPPLQ8TBG4 499 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 FERMT2Q96AC1 680 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 EPSTI1Q96J88 318 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 RMDN3Q96TC7 470 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 DPH2Q9BQC3 489 aaPredicted RBP3.98□□□□□ -1.77
MCF2-202ENST00000370573 PDCD2LQ9BRP1 358 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 PANK2Q9BZ23 570 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms