RNA–Protein interactions for RNA: ENST00000370138.1

LRRC39-203, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,466 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-203ENST00000370138 RMDN2Q96LZ7 410 aa4.5□□□□□ -1.69
LRRC39-203ENST00000370138 CRAMP1Q96RY5 1269 aa4.5□□□□□ -1.69
LRRC39-203ENST00000370138 CPEB1Q9BZB8 566 aaKnown RBP4.5□□□□□ -1.69
LRRC39-203ENST00000370138 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.5□□□□□ -1.69
LRRC39-203ENST00000370138 EIF4G1Q04637 1599 aaKnown RBP4.5□□□□□ -1.69
LRRC39-203ENST00000370138 CCDC196A0A1B0GTZ2 297 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 ANKRD18BA2A2Z9 1011 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 TMEM191CA6NGB0 347 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 TMEM110-MUSTN1A8MSY1 372 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 HOXA3O43365 443 aaPredicted RBP4.49□□□□□ -1.69
LRRC39-203ENST00000370138 TGM5O43548 720 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 KPNA6O60684 536 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 RNASEH2AO75792 299 aaKnown RBP4.49□□□□□ -1.69
LRRC39-203ENST00000370138 ALDH1A2O94788 518 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 FSBPO95073 299 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 RPN1P04843 607 aaKnown RBP4.49□□□□□ -1.69
LRRC39-203ENST00000370138 SKILP12757 684 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 CASRP41180 1078 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 TRAPPC10P48553 1259 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 DSG1Q02413 1049 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 SEPT2Q15019 361 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 CCDC93Q567U6 631 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 PLEKHG4Q58EX7 1191 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 DCAF17Q5H9S7 520 aaPredicted RBP4.49□□□□□ -1.69
LRRC39-203ENST00000370138 CCDC158Q5M9N0 1113 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 ZBTB41Q5SVQ8 909 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 ARL6IP6Q8N6S5 226 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 CCDC191Q8NCU4 936 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 CPT1CQ8TCG5 803 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 CHTF18Q8WVB6 975 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 C17orf50Q8WW18 174 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 ERP27Q96DN0 273 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 MFSD3Q96ES6 412 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 ZNF496Q96IT1 587 aaPredicted RBP4.49□□□□□ -1.69
LRRC39-203ENST00000370138 ORAI3Q9BRQ5 295 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 MTFR1LQ9H019 292 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 ZNF768Q9H5H4 540 aaKnown RBP4.49□□□□□ -1.69
LRRC39-203ENST00000370138 RMI1Q9H9A7 625 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 ZNF69Q9UC07 566 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 USP25Q9UHP3 1055 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 MYPNQ86TC9 1320 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 TMCO5BA8MYB1 307 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 KIF3BO15066 747 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 TBX3O15119 743 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 PPFIA2O75334 1257 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 LY86O95711 162 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 F2P00734 622 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 PDGFRBP09619 1106 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 POU3F2P20265 443 aaPredicted RBP4.49□□□□□ -1.69
LRRC39-203ENST00000370138 BMP5P22003 454 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 RRM1P23921 792 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 PSMA3P25788 255 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 STIP1P31948 543 aaKnown RBP4.49□□□□□ -1.69
LRRC39-203ENST00000370138 NEK4P51957 841 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 SH3BGRP55822 239 aaPredicted RBP4.49□□□□□ -1.69
LRRC39-203ENST00000370138 BRD3Q15059 726 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 MAN2A1Q16706 1144 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 ODR4Q5SWX8 454 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 CNNM4Q6P4Q7 775 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 SKAP1Q86WV1 359 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 BRSK2Q8IWQ3 736 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 ZZZ3Q8IYH5 903 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 PROKR1Q8TCW9 393 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 GIMAP1Q8WWP7 306 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 CENPTQ96BT3 561 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 HIST1H2AHQ96KK5 128 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 MAP3K14Q99558 947 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 HIST1H2AJQ99878 128 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 FDXACB1Q9BRP7 624 aaPredicted RBP4.49□□□□□ -1.69
LRRC39-203ENST00000370138 IQCGQ9H095 443 aaKnown RBP4.49□□□□□ -1.69
LRRC39-203ENST00000370138 DHX36Q9H2U1 1008 aaKnown RBP4.49□□□□□ -1.69
LRRC39-203ENST00000370138 MS4A5Q9H3V2 200 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 RWDD1Q9H446 243 aaPredicted RBP4.49□□□□□ -1.69
LRRC39-203ENST00000370138 AS3MTQ9HBK9 375 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 TYW1Q9NV66 732 aaKnown RBP4.49□□□□□ -1.69
LRRC39-203ENST00000370138 THG1LQ9NWX6 298 aaKnown RBP4.49□□□□□ -1.69
LRRC39-203ENST00000370138 COMMD8Q9NX08 183 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 RABL2BQ9UNT1 228 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 FZD1Q9UP38 647 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 ZKSCAN5Q9Y2L8 839 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 SLC45A1Q9Y2W3 748 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 RABGAP1Q9Y3P9 1069 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 HS3ST4Q9Y661 456 aa4.49□□□□□ -1.69
LRRC39-203ENST00000370138 DDX49Q9Y6V7 483 aaKnown RBP4.49□□□□□ -1.69
LRRC39-203ENST00000370138 A0A1W2PRQ8 180 aa4.48□□□□□ -1.69
LRRC39-203ENST00000370138 SHTN1A0MZ66 631 aa4.48□□□□□ -1.69
LRRC39-203ENST00000370138 H0YHG0 523 aa4.48□□□□□ -1.69
LRRC39-203ENST00000370138 CAND2O75155 1236 aa4.48□□□□□ -1.69
LRRC39-203ENST00000370138 SCAF4O95104 1147 aaKnown RBP4.48□□□□□ -1.69
LRRC39-203ENST00000370138 GCP02774 474 aa4.48□□□□□ -1.69
LRRC39-203ENST00000370138 CD40P25942 277 aa4.48□□□□□ -1.69
LRRC39-203ENST00000370138 GNALP38405 381 aa4.48□□□□□ -1.69
LRRC39-203ENST00000370138 EIF2B5Q13144 721 aaKnown RBP4.48□□□□□ -1.69
LRRC39-203ENST00000370138 LRRC32Q14392 662 aa4.48□□□□□ -1.69
LRRC39-203ENST00000370138 SEPT7Q16181 437 aaKnown RBP4.48□□□□□ -1.69
LRRC39-203ENST00000370138 PDXDC1Q6P996 788 aa4.48□□□□□ -1.69
LRRC39-203ENST00000370138 LRRC55Q6ZSA7 311 aa4.48□□□□□ -1.69
LRRC39-203ENST00000370138 DAAM2Q86T65 1068 aa4.48□□□□□ -1.69
LRRC39-203ENST00000370138 SAMD14Q8IZD0 417 aaPredicted RBP4.48□□□□□ -1.69
LRRC39-203ENST00000370138 UNC5BQ8IZJ1 945 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms