RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 CGRRF1Q99675 332 aa5.65□□□□□ -1.5
SMNDC1-202ENST00000369603 ASCC2Q9H1I8 757 aaPredicted RBP5.65□□□□□ -1.5
SMNDC1-202ENST00000369603 KCTD10Q9H3F6 313 aa5.65□□□□□ -1.5
SMNDC1-202ENST00000369603 ZFYVE28Q9HCC9 887 aa5.65□□□□□ -1.5
SMNDC1-202ENST00000369603 PPANQ9NQ55 473 aaKnown RBP5.65□□□□□ -1.5
SMNDC1-202ENST00000369603 SNX24Q9Y343 169 aa5.65□□□□□ -1.5
SMNDC1-202ENST00000369603 ALG6Q9Y672 507 aa5.65□□□□□ -1.5
SMNDC1-202ENST00000369603 A0A1B0GUA9 196 aa5.65□□□□□ -1.51
SMNDC1-202ENST00000369603 ZNF189O75820 626 aaPredicted RBP5.65□□□□□ -1.51
SMNDC1-202ENST00000369603 STAMBPO95630 424 aa5.65□□□□□ -1.51
SMNDC1-202ENST00000369603 HOXC6P09630 235 aa5.65□□□□□ -1.51
SMNDC1-202ENST00000369603 NR1D1P20393 614 aa5.65□□□□□ -1.51
SMNDC1-202ENST00000369603 SDC4P31431 198 aa5.65□□□□□ -1.51
SMNDC1-202ENST00000369603 CUL2Q13617 745 aa5.65□□□□□ -1.51
SMNDC1-202ENST00000369603 PIGHQ14442 188 aaPredicted RBP5.65□□□□□ -1.51
SMNDC1-202ENST00000369603 NFIL3Q16649 462 aa5.65□□□□□ -1.51
SMNDC1-202ENST00000369603 GJB7Q6PEY0 223 aa5.65□□□□□ -1.51
SMNDC1-202ENST00000369603 DARS2Q6PI48 645 aaKnown RBP5.65□□□□□ -1.51
SMNDC1-202ENST00000369603 MPZL3Q6UWV2 235 aa5.65□□□□□ -1.51
SMNDC1-202ENST00000369603 CENPUQ71F23 418 aa5.65□□□□□ -1.51
SMNDC1-202ENST00000369603 ZNF571Q7Z3V5 609 aaPredicted RBP5.65□□□□□ -1.51
SMNDC1-202ENST00000369603 PLEKHH3Q7Z736 793 aa5.65□□□□□ -1.51
SMNDC1-202ENST00000369603 IRF2BP1Q8IU81 584 aa5.65□□□□□ -1.51
SMNDC1-202ENST00000369603 CTAGE3PQ8IX95 158 aa5.65□□□□□ -1.51
SMNDC1-202ENST00000369603 CACNA2D3Q8IZS8 1091 aa5.65□□□□□ -1.51
SMNDC1-202ENST00000369603 PDIK1LQ8N165 341 aa5.65□□□□□ -1.51
SMNDC1-202ENST00000369603 LRRC71Q8N4P6 559 aa5.65□□□□□ -1.51
SMNDC1-202ENST00000369603 C18orf8Q96DM3 657 aa5.65□□□□□ -1.51
SMNDC1-202ENST00000369603 MRRFQ96E11 262 aaKnown RBP5.65□□□□□ -1.51
SMNDC1-202ENST00000369603 TNIP3Q96KP6 325 aa5.65□□□□□ -1.51
SMNDC1-202ENST00000369603 NACA2Q9H009 215 aa5.65□□□□□ -1.51
SMNDC1-202ENST00000369603 GBA2Q9HCG7 927 aaPredicted RBP5.65□□□□□ -1.51
SMNDC1-202ENST00000369603 VTA1Q9NP79 307 aa5.65□□□□□ -1.51
SMNDC1-202ENST00000369603 PLAAQ9Y263 795 aa5.65□□□□□ -1.51
SMNDC1-202ENST00000369603 CAPN6Q9Y6Q1 641 aa5.65□□□□□ -1.51
SMNDC1-202ENST00000369603 BTAF1O14981 1849 aa5.65□□□□□ -1.51
SMNDC1-202ENST00000369603 PHF2O75151 1096 aa5.65□□□□□ -1.51
SMNDC1-202ENST00000369603 CD4P01730 458 aa5.65□□□□□ -1.51
SMNDC1-202ENST00000369603 CLNS1AP54105 237 aaKnown RBP5.65□□□□□ -1.51
SMNDC1-202ENST00000369603 GCNT1Q02742 428 aa5.65□□□□□ -1.51
SMNDC1-202ENST00000369603 DCAF4L1Q3SXM0 396 aa5.65□□□□□ -1.51
SMNDC1-202ENST00000369603 ARL13BQ3SXY8 428 aa5.65□□□□□ -1.51
SMNDC1-202ENST00000369603 SV2AQ7L0J3 742 aa5.65□□□□□ -1.51
SMNDC1-202ENST00000369603 RCOR2Q8IZ40 523 aa5.65□□□□□ -1.51
SMNDC1-202ENST00000369603 NME8Q8N427 588 aa5.65□□□□□ -1.51
SMNDC1-202ENST00000369603 NOA1Q8NC60 698 aaKnown RBP5.65□□□□□ -1.51
SMNDC1-202ENST00000369603 CDKL2Q92772 493 aa5.65□□□□□ -1.51
SMNDC1-202ENST00000369603 TTC25Q96NG3 672 aa5.65□□□□□ -1.51
SMNDC1-202ENST00000369603 FAM129AQ9BZQ8 928 aa5.65□□□□□ -1.51
SMNDC1-202ENST00000369603 NGRNQ9NPE2 291 aaKnown RBP5.65□□□□□ -1.51
SMNDC1-202ENST00000369603 RBM12Q9NTZ6 932 aaKnown RBP5.65□□□□□ -1.51
SMNDC1-202ENST00000369603 INTS9Q9NV88 658 aaKnown RBP5.65□□□□□ -1.51
SMNDC1-202ENST00000369603 AGAP1Q9UPQ3 857 aa5.65□□□□□ -1.51
SMNDC1-202ENST00000369603 ABCA3Q99758 1704 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 CES2O00748 559 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 BUB1BO60566 1050 aaPredicted RBP5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 CELF2O95319 508 aaKnown RBP5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 KRT3P12035 628 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 CYP11B1P15538 503 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 CA8P35219 290 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 NOVP48745 357 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 CPT1AP50416 773 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 ZNF157P51786 506 aaPredicted RBP5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 CASP5P51878 434 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 HUNKP57058 714 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 DYNLT1P63172 113 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 SHROOM1Q2M3G4 852 aaPredicted RBP5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 ARSHQ5FYA8 562 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 WDR49Q8IV35 697 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 C12orf56Q8IXR9 622 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 ATL2Q8NHH9 583 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 ZNF526Q8TF50 670 aaPredicted RBP5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 CDCA5Q96FF9 252 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 ZNF668Q96K58 619 aaPredicted RBP5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 INPP4AQ96PE3 977 aaPredicted RBP5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 FUT8Q9BYC5 575 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 TMEM117Q9H0C3 514 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 ZWILCHQ9H900 591 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 AMACRQ9UHK6 382 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 COMMD10Q9Y6G5 202 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 ASTN1O14525 1302 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 SPDYE16A6NNV3 312 aaPredicted RBP5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 SPATA31C2B4DYI2 1134 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 ADM5C9JUS6 153 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 I3L4J1 428 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 ZBED1O96006 694 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 RPLP2P05387 115 aaKnown RBP5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 PGK2P07205 417 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 COMTP21964 271 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 GGCXP38435 758 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 TMEM132BQ14DG7 1078 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 LLGL1Q15334 1064 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 ECM1Q16610 540 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 ARHGEF18Q6ZSZ5 1173 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 RSRC2Q7L4I2 434 aaKnown RBP5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 HOMEZQ8IX15 550 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 ANKRD42Q8N9B4 389 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 SLC30A5Q8TAD4 765 aa5.64□□□□□ -1.51
SMNDC1-202ENST00000369603 UHMK1Q8TAS1 419 aaKnown RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms