RNA–Protein interactions for RNA: ENST00000369550.9

DKC1-201, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DKC1, Length 2,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-201ENST00000369550 ETNPPLQ8TBG4 499 aa17.98■□□□□ 0.47
DKC1-201ENST00000369550 SCG3Q8WXD2 468 aaKnown RBP17.98■□□□□ 0.47
DKC1-201ENST00000369550 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.98■□□□□ 0.479e-7■■■■■ 35.8
DKC1-201ENST00000369550 RPL26L1Q9UNX3 145 aaKnown RBP17.98■□□□□ 0.47
DKC1-201ENST00000369550 PCDHA1Q9Y5I3 950 aa17.98■□□□□ 0.47
DKC1-201ENST00000369550 EDF1O60869 148 aaKnown RBP17.98■□□□□ 0.47
DKC1-201ENST00000369550 IVDP26440 423 aa17.98■□□□□ 0.47
DKC1-201ENST00000369550 POLD1P28340 1107 aa17.98■□□□□ 0.47
DKC1-201ENST00000369550 ARHGAP4P98171 946 aa17.98■□□□□ 0.47
DKC1-201ENST00000369550 C4orf50Q6ZRC1 276 aa17.98■□□□□ 0.47
DKC1-201ENST00000369550 FAM43BQ6ZT52 329 aaPredicted RBP17.98■□□□□ 0.47
DKC1-201ENST00000369550 ARHGEF1Q92888 912 aaKnown RBP17.98■□□□□ 0.47
DKC1-201ENST00000369550 GJD4Q96KN9 370 aaPredicted RBP17.98■□□□□ 0.47
DKC1-201ENST00000369550 PCDHB18PQ96TA0 734 aa17.98■□□□□ 0.47
DKC1-201ENST00000369550 GORASP1Q9BQQ3 440 aa17.98■□□□□ 0.47
DKC1-201ENST00000369550 UBN1Q9NPG3 1134 aa17.98■□□□□ 0.47
DKC1-201ENST00000369550 METTL5Q9NRN9 209 aaKnown RBP17.98■□□□□ 0.47
DKC1-201ENST00000369550 TRAFD1O14545 582 aaPredicted RBP17.97■□□□□ 0.47
DKC1-201ENST00000369550 FSCN2O14926 492 aa17.97■□□□□ 0.47
DKC1-201ENST00000369550 GSTA2P09210 222 aa17.97■□□□□ 0.47
DKC1-201ENST00000369550 MAN1A1P33908 653 aa17.97■□□□□ 0.47
DKC1-201ENST00000369550 CETN1Q12798 172 aa17.97■□□□□ 0.47
DKC1-201ENST00000369550 BFSP1Q12934 665 aa17.97■□□□□ 0.47
DKC1-201ENST00000369550 CUL3Q13618 768 aa17.97■□□□□ 0.47
DKC1-201ENST00000369550 RINT1Q6NUQ1 792 aa17.97■□□□□ 0.47
DKC1-201ENST00000369550 SYDE1Q6ZW31 735 aaPredicted RBP17.97■□□□□ 0.47
DKC1-201ENST00000369550 MTDHQ86UE4 582 aaKnown RBP17.97■□□□□ 0.47
DKC1-201ENST00000369550 C4orf33Q8N1A6 199 aa17.97■□□□□ 0.47
DKC1-201ENST00000369550 PHC3Q8NDX5 983 aa17.97■□□□□ 0.47
DKC1-201ENST00000369550 C10orf82Q8WW14 230 aa17.97■□□□□ 0.47
DKC1-201ENST00000369550 SMC6Q96SB8 1091 aa17.97■□□□□ 0.47
DKC1-201ENST00000369550 NPHS2Q9NP85 383 aa17.97■□□□□ 0.47
DKC1-201ENST00000369550 AGPAT3Q9NRZ7 376 aa17.97■□□□□ 0.47
DKC1-201ENST00000369550 C10orf71Q711Q0 1435 aa17.97■□□□□ 0.47
DKC1-201ENST00000369550 DDX60LQ5H9U9 1706 aaKnown RBP17.97■□□□□ 0.47
DKC1-201ENST00000369550 CYP3A7-CYP3A51PA0A087WV96 503 aa17.97■□□□□ 0.47
DKC1-201ENST00000369550 FAM196BA6NMK8 535 aa17.97■□□□□ 0.47
DKC1-201ENST00000369550 RNF8O76064 485 aa17.97■□□□□ 0.47
DKC1-201ENST00000369550 CA4P22748 312 aa17.97■□□□□ 0.47
DKC1-201ENST00000369550 CYP3A7P24462 503 aa17.97■□□□□ 0.47
DKC1-201ENST00000369550 PDK4Q16654 411 aa17.97■□□□□ 0.47
DKC1-201ENST00000369550 FYB2Q5VWT5 728 aa17.97■□□□□ 0.47
DKC1-201ENST00000369550 ZNF365Q70YC5 407 aa17.97■□□□□ 0.47
DKC1-201ENST00000369550 NLRP9Q7RTR0 991 aa17.97■□□□□ 0.47
DKC1-201ENST00000369550 ARHGEF19Q8IW93 802 aa17.97■□□□□ 0.47
DKC1-201ENST00000369550 TRAPPC9Q96Q05 1148 aa17.97■□□□□ 0.47
DKC1-201ENST00000369550 GLT8D2Q9H1C3 349 aa17.97■□□□□ 0.47
DKC1-201ENST00000369550 TRABDQ9H4I3 376 aa17.97■□□□□ 0.47
DKC1-201ENST00000369550 PARVGQ9HBI0 331 aa17.97■□□□□ 0.47
DKC1-201ENST00000369550 SBF2Q86WG5 1849 aa17.97■□□□□ 0.47
DKC1-201ENST00000369550 POC1B-GALNT4F8VUJ3 575 aa17.96■□□□□ 0.47
DKC1-201ENST00000369550 MTA2O94776 668 aa17.96■□□□□ 0.47
DKC1-201ENST00000369550 SGPL1O95470 568 aa17.96■□□□□ 0.47
DKC1-201ENST00000369550 CACNA2D1P54289 1103 aa17.96■□□□□ 0.47
DKC1-201ENST00000369550 PICALMQ13492 652 aa17.96■□□□□ 0.47
DKC1-201ENST00000369550 HHATQ5VTY9 493 aa17.96■□□□□ 0.47
DKC1-201ENST00000369550 TRABD2AQ86V40 505 aa17.96■□□□□ 0.47
DKC1-201ENST00000369550 AMIGO3Q86WK7 504 aa17.96■□□□□ 0.47
DKC1-201ENST00000369550 SYCP3Q8IZU3 236 aa17.96■□□□□ 0.47
DKC1-201ENST00000369550 PPFIBP2Q8ND30 876 aa17.96■□□□□ 0.47
DKC1-201ENST00000369550 ACP6Q9NPH0 428 aa17.96■□□□□ 0.47
DKC1-201ENST00000369550 CAPN9O14815 690 aa17.96■□□□□ 0.47
DKC1-201ENST00000369550 SORBS3O60504 671 aa17.96■□□□□ 0.47
DKC1-201ENST00000369550 RRM1P23921 792 aa17.96■□□□□ 0.47
DKC1-201ENST00000369550 RPA3P35244 121 aaPredicted RBP17.96■□□□□ 0.47
DKC1-201ENST00000369550 NR1H3Q13133 447 aa17.96■□□□□ 0.47
DKC1-201ENST00000369550 GPATCH4Q5T3I0 446 aaKnown RBP17.96■□□□□ 0.47
DKC1-201ENST00000369550 DSTYKQ6XUX3 929 aa17.96■□□□□ 0.47
DKC1-201ENST00000369550 FAM178BQ8IXR5 827 aa17.96■□□□□ 0.47
DKC1-201ENST00000369550 DRAXINQ8NBI3 349 aaPredicted RBP17.96■□□□□ 0.47
DKC1-201ENST00000369550 MAML1Q92585 1016 aa17.96■□□□□ 0.47
DKC1-201ENST00000369550 STMN2Q93045 179 aa17.96■□□□□ 0.47
DKC1-201ENST00000369550 MRRFQ96E11 262 aaKnown RBP17.96■□□□□ 0.47
DKC1-201ENST00000369550 MIPEPQ99797 713 aa17.96■□□□□ 0.47
DKC1-201ENST00000369550 EPAS1Q99814 870 aa17.96■□□□□ 0.47
DKC1-201ENST00000369550 GRID1Q9ULK0 1009 aa17.96■□□□□ 0.47
DKC1-201ENST00000369550 MROH7Q68CQ1 1323 aa17.96■□□□□ 0.47
DKC1-201ENST00000369550 A0A1B0GVG6 124 aa17.95■□□□□ 0.46
DKC1-201ENST00000369550 KRT36O76013 467 aa17.95■□□□□ 0.46
DKC1-201ENST00000369550 SLC45A4Q5BKX6 768 aa17.95■□□□□ 0.46
DKC1-201ENST00000369550 RIBC1Q8N443 379 aaPredicted RBP17.95■□□□□ 0.46
DKC1-201ENST00000369550 B4GALNT2Q8NHY0 566 aa17.95■□□□□ 0.46
DKC1-201ENST00000369550 EZH1Q92800 747 aaPredicted RBP17.95■□□□□ 0.46
DKC1-201ENST00000369550 MCUR1Q96AQ8 359 aa17.95■□□□□ 0.46
DKC1-201ENST00000369550 GPR101Q96P66 508 aaPredicted RBP17.95■□□□□ 0.46
DKC1-201ENST00000369550 GBP5Q96PP8 586 aa17.95■□□□□ 0.46
DKC1-201ENST00000369550 RBM15Q96T37 977 aaKnown RBP eCLIP17.95■□□□□ 0.462e-6■■□□□ 12.2
DKC1-201ENST00000369550 EIF2AK1Q9BQI3 630 aaKnown RBP17.95■□□□□ 0.46
DKC1-201ENST00000369550 TMX4Q9H1E5 349 aaPredicted RBP17.95■□□□□ 0.46
DKC1-201ENST00000369550 EMSYQ7Z589 1322 aa17.95■□□□□ 0.46
DKC1-201ENST00000369550 ECE2O60344 883 aa17.95■□□□□ 0.46
DKC1-201ENST00000369550 CCDC22O60826 627 aa17.95■□□□□ 0.46
DKC1-201ENST00000369550 NFIL3Q16649 462 aa17.95■□□□□ 0.46
DKC1-201ENST00000369550 MEX3CQ5U5Q3 659 aaKnown RBP17.95■□□□□ 0.46
DKC1-201ENST00000369550 IZUMO3Q5VZ72 239 aa17.95■□□□□ 0.46
DKC1-201ENST00000369550 LRRC74BQ6ZQY2 392 aa17.95■□□□□ 0.46
DKC1-201ENST00000369550 STXBP4Q6ZWJ1 553 aa17.95■□□□□ 0.46
DKC1-201ENST00000369550 CLNKQ7Z7G1 428 aa17.95■□□□□ 0.46
DKC1-201ENST00000369550 NOP9Q86U38 636 aaKnown RBP17.95■□□□□ 0.46
DKC1-201ENST00000369550 ATL2Q8NHH9 583 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms