RNA–Protein interactions for RNA: ENST00000366442.2

SHC1-201, Transcript of SHC adaptor protein 1, humanhuman

TSL 3

Gene SHC1, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-201ENST00000366442 HFE2Q6ZVN8 426 aa25.83■■□□□ 1.73
SHC1-201ENST00000366442 BMP8AQ7Z5Y6 402 aa25.83■■□□□ 1.73
SHC1-201ENST00000366442 PALB2Q86YC2 1186 aa25.83■■□□□ 1.73
SHC1-201ENST00000366442 MYCT1Q8N699 235 aa25.83■■□□□ 1.73
SHC1-201ENST00000366442 FEZF2Q8TBJ5 459 aa25.83■■□□□ 1.73
SHC1-201ENST00000366442 ZMAT2Q96NC0 199 aaKnown RBP25.83■■□□□ 1.73
SHC1-201ENST00000366442 FOXD4L1Q9NU39 408 aa25.83■■□□□ 1.73
SHC1-201ENST00000366442 STK17AQ9UEE5 414 aa25.83■■□□□ 1.73
SHC1-201ENST00000366442 CCDC195A0A1B0GUA6 201 aa25.82■■□□□ 1.72
SHC1-201ENST00000366442 TRAPPC3O43617 180 aa25.82■■□□□ 1.72
SHC1-201ENST00000366442 HARSP12081 509 aaKnown RBP25.82■■□□□ 1.72
SHC1-201ENST00000366442 FGFR3P22607 806 aa25.82■■□□□ 1.72
SHC1-201ENST00000366442 SOX4Q06945 474 aaPredicted RBP25.82■■□□□ 1.72
SHC1-201ENST00000366442 SIGLEC14Q08ET2 396 aa25.82■■□□□ 1.72
SHC1-201ENST00000366442 CD300LGQ6UXG3 332 aa25.82■■□□□ 1.72
SHC1-201ENST00000366442 USP49Q70CQ1 688 aa25.82■■□□□ 1.72
SHC1-201ENST00000366442 OTOP3Q7RTS5 596 aa25.82■■□□□ 1.72
SHC1-201ENST00000366442 CEP57Q86XR8 500 aa25.82■■□□□ 1.72
SHC1-201ENST00000366442 BICD1Q96G01 975 aa25.82■■□□□ 1.72
SHC1-201ENST00000366442 CLSTN3Q9BQT9 956 aa25.82■■□□□ 1.72
SHC1-201ENST00000366442 GOLGA2P5Q9HBQ8 144 aa25.82■■□□□ 1.72
SHC1-201ENST00000366442 ZDHHC7Q9NXF8 308 aa25.82■■□□□ 1.72
SHC1-201ENST00000366442 TBX20Q9UMR3 447 aa25.82■■□□□ 1.72
SHC1-201ENST00000366442 VWA8A3KMH1 1905 aa25.82■■□□□ 1.72
SHC1-201ENST00000366442 TMEM221A6NGB7 291 aa25.81■■□□□ 1.72
SHC1-201ENST00000366442 M0R296 226 aa25.81■■□□□ 1.72
SHC1-201ENST00000366442 TRAK2O60296 914 aa25.81■■□□□ 1.72
SHC1-201ENST00000366442 TBCAO75347 108 aaKnown RBP25.81■■□□□ 1.72
SHC1-201ENST00000366442 PIGRP01833 764 aa25.81■■□□□ 1.72
SHC1-201ENST00000366442 RPL9P32969 192 aaKnown RBP25.81■■□□□ 1.72
SHC1-201ENST00000366442 TXLNAP40222 546 aa25.81■■□□□ 1.72
SHC1-201ENST00000366442 SLC39A14Q15043 492 aa25.81■■□□□ 1.72
SHC1-201ENST00000366442 SPECC1Q5M775 1068 aa25.81■■□□□ 1.72
SHC1-201ENST00000366442 GLYCTKQ8IVS8 523 aa25.81■■□□□ 1.72
SHC1-201ENST00000366442 C3orf58Q8NDZ4 430 aa25.81■■□□□ 1.72
SHC1-201ENST00000366442 ACSF2Q96CM8 615 aaPredicted RBP25.81■■□□□ 1.72
SHC1-201ENST00000366442 MFSD14AQ96MC6 490 aa25.81■■□□□ 1.72
SHC1-201ENST00000366442 K7ENM7 598 aa25.8■■□□□ 1.72
SHC1-201ENST00000366442 MEFVO15553 781 aaPredicted RBP25.8■■□□□ 1.72
SHC1-201ENST00000366442 RFPL2O75678 378 aa25.8■■□□□ 1.72
SHC1-201ENST00000366442 SPATA31D3P0C874 917 aa25.8■■□□□ 1.72
SHC1-201ENST00000366442 CEBPZQ03701 1054 aaKnown RBP25.8■■□□□ 1.72
SHC1-201ENST00000366442 KYAT1Q16773 422 aa25.8■■□□□ 1.72
SHC1-201ENST00000366442 SLC10A6Q3KNW5 377 aa25.8■■□□□ 1.72
SHC1-201ENST00000366442 SPATA31D4Q6ZUB0 917 aa25.8■■□□□ 1.72
SHC1-201ENST00000366442 KREMEN2Q8NCW0 462 aa25.8■■□□□ 1.72
SHC1-201ENST00000366442 ZNF707Q96C28 371 aaPredicted RBP25.8■■□□□ 1.72
SHC1-201ENST00000366442 CLIC6Q96NY7 704 aa25.8■■□□□ 1.72
SHC1-201ENST00000366442 USP28Q96RU2 1077 aa25.8■■□□□ 1.72
SHC1-201ENST00000366442 FIZ1Q96SL8 496 aa25.8■■□□□ 1.72
SHC1-201ENST00000366442 PLEKHA5Q9HAU0 1116 aa25.8■■□□□ 1.72
SHC1-201ENST00000366442 WDR6Q9NNW5 1121 aaKnown RBP25.8■■□□□ 1.72
SHC1-201ENST00000366442 FBXW11Q9UKB1 542 aa25.8■■□□□ 1.72
SHC1-201ENST00000366442 SORCS3Q9UPU3 1222 aa25.8■■□□□ 1.72
SHC1-201ENST00000366442 MYO10Q9HD67 2058 aa25.79■■□□□ 1.72
SHC1-201ENST00000366442 PODXLO00592 558 aa25.79■■□□□ 1.72
SHC1-201ENST00000366442 HNRNPDLO14979 420 aaKnown RBP25.79■■□□□ 1.72
SHC1-201ENST00000366442 IGFBP6P24592 240 aaPredicted RBP25.79■■□□□ 1.72
SHC1-201ENST00000366442 MATR3P43243 847 aaKnown RBP eCLIP25.79■■□□□ 1.726e-7■■■■□ 23.7
SHC1-201ENST00000366442 LIG4P49917 911 aa25.79■■□□□ 1.72
SHC1-201ENST00000366442 MTMR3Q13615 1198 aa25.79■■□□□ 1.72
SHC1-201ENST00000366442 UBALD2Q8IYN6 164 aa25.79■■□□□ 1.72
SHC1-201ENST00000366442 KRI1Q8N9T8 703 aaKnown RBP25.79■■□□□ 1.72
SHC1-201ENST00000366442 HAPLN2Q9GZV7 340 aa25.79■■□□□ 1.72
SHC1-201ENST00000366442 MTRRQ9UBK8 725 aa25.79■■□□□ 1.72
SHC1-201ENST00000366442 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.79■■□□□ 1.72
SHC1-201ENST00000366442 PDCD11Q14690 1871 aaKnown RBP25.79■■□□□ 1.72
SHC1-201ENST00000366442 ZMYND10O75800 440 aa25.78■■□□□ 1.72
SHC1-201ENST00000366442 CLTAP09496 248 aa25.78■■□□□ 1.72
SHC1-201ENST00000366442 NASPP49321 788 aaPredicted RBP25.78■■□□□ 1.72
SHC1-201ENST00000366442 GTF2BQ00403 316 aa25.78■■□□□ 1.72
SHC1-201ENST00000366442 RRAGBQ5VZM2 374 aa25.78■■□□□ 1.72
SHC1-201ENST00000366442 SMG7Q92540 1137 aaKnown RBP25.78■■□□□ 1.72
SHC1-201ENST00000366442 STAMQ92783 540 aa25.78■■□□□ 1.72
SHC1-201ENST00000366442 PRKD2Q9BZL6 878 aa25.78■■□□□ 1.72
SHC1-201ENST00000366442 ST6GALNAC4Q9H4F1 302 aa25.78■■□□□ 1.72
SHC1-201ENST00000366442 ZHX3Q9H4I2 956 aa25.78■■□□□ 1.72
SHC1-201ENST00000366442 LIMD1Q9UGP4 676 aa25.78■■□□□ 1.72
SHC1-201ENST00000366442 BACE2Q9Y5Z0 518 aa25.78■■□□□ 1.72
SHC1-201ENST00000366442 ZNF318Q5VUA4 2279 aa25.77■■□□□ 1.72
SHC1-201ENST00000366442 MYBP10242 640 aa25.77■■□□□ 1.72
SHC1-201ENST00000366442 PDIA4P13667 645 aaKnown RBP25.77■■□□□ 1.72
SHC1-201ENST00000366442 RAB33AQ14088 237 aa25.77■■□□□ 1.72
SHC1-201ENST00000366442 SEZ6Q53EL9 994 aa25.77■■□□□ 1.72
SHC1-201ENST00000366442 CCDC73Q6ZRK6 1079 aa25.77■■□□□ 1.72
SHC1-201ENST00000366442 ANKS3Q6ZW76 656 aa25.77■■□□□ 1.72
SHC1-201ENST00000366442 MAP4K3Q8IVH8 894 aa25.77■■□□□ 1.72
SHC1-201ENST00000366442 HSCBQ8IWL3 235 aa25.77■■□□□ 1.72
SHC1-201ENST00000366442 C18orf25Q96B23 403 aaPredicted RBP25.77■■□□□ 1.72
SHC1-201ENST00000366442 ASIC4Q96FT7 647 aa25.77■■□□□ 1.72
SHC1-201ENST00000366442 CLUHO75153 1309 aa25.77■■□□□ 1.72
SHC1-201ENST00000366442 FAM189A1O60320 539 aa25.76■■□□□ 1.71
SHC1-201ENST00000366442 CXCL8P10145 99 aa25.76■■□□□ 1.71
SHC1-201ENST00000366442 TKTP29401 623 aaKnown RBP25.76■■□□□ 1.71
SHC1-201ENST00000366442 BRCC3P46736 316 aa25.76■■□□□ 1.71
SHC1-201ENST00000366442 PBXIP1Q96AQ6 731 aa25.76■■□□□ 1.71
SHC1-201ENST00000366442 TSPAN18Q96SJ8 248 aa25.76■■□□□ 1.71
SHC1-201ENST00000366442 KCNH6Q9H252 994 aa25.76■■□□□ 1.71
SHC1-201ENST00000366442 MUC6Q6W4X9 2439 aa25.75■■□□□ 1.71
SHC1-201ENST00000366442 A0A0B4J269 797 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms