RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 PCDHGA7Q9Y5G6 932 aa5.48□□□□□ -1.53
RNU6-553P-201ENST00000364047 PCDHGA6Q9Y5G7 932 aa5.48□□□□□ -1.53
RNU6-553P-201ENST00000364047 PCDHGA3Q9Y5H0 932 aa5.48□□□□□ -1.53
RNU6-553P-201ENST00000364047 FPGT-TNNI3KV9GXZ4 949 aa5.48□□□□□ -1.53
RNU6-553P-201ENST00000364047 MYBBP1AQ9BQG0 1328 aaKnown RBP5.48□□□□□ -1.53
RNU6-553P-201ENST00000364047 A0A087X1B8 175 aa5.47□□□□□ -1.53
RNU6-553P-201ENST00000364047 TMEM200CA6NKL6 621 aa5.47□□□□□ -1.53
RNU6-553P-201ENST00000364047 RAMP2O60895 175 aa5.47□□□□□ -1.53
RNU6-553P-201ENST00000364047 HLA-DOAP06340 250 aa5.47□□□□□ -1.53
RNU6-553P-201ENST00000364047 KRT4P19013 534 aa5.47□□□□□ -1.53
RNU6-553P-201ENST00000364047 FSTL1Q12841 308 aa5.47□□□□□ -1.53
RNU6-553P-201ENST00000364047 PCBP2Q15366 365 aaKnown RBP eCLIP5.47□□□□□ -1.53
RNU6-553P-201ENST00000364047 TSHZ3Q63HK5 1081 aa5.47□□□□□ -1.53
RNU6-553P-201ENST00000364047 LAIR1Q6GTX8 287 aa5.47□□□□□ -1.53
RNU6-553P-201ENST00000364047 UBE3BQ7Z3V4 1068 aa5.47□□□□□ -1.53
RNU6-553P-201ENST00000364047 PNMA8AQ86V59 439 aaPredicted RBP5.47□□□□□ -1.53
RNU6-553P-201ENST00000364047 CPEB3Q8NE35 698 aaKnown RBP5.47□□□□□ -1.53
RNU6-553P-201ENST00000364047 ZCRB1Q8TBF4 217 aaKnown RBP5.47□□□□□ -1.53
RNU6-553P-201ENST00000364047 CEP89Q96ST8 783 aa5.47□□□□□ -1.53
RNU6-553P-201ENST00000364047 MYOCQ99972 504 aa5.47□□□□□ -1.53
RNU6-553P-201ENST00000364047 FBXO34Q9NWN3 711 aa5.47□□□□□ -1.53
RNU6-553P-201ENST00000364047 ANKFY1Q9P2R3 1169 aa5.47□□□□□ -1.53
RNU6-553P-201ENST00000364047 ATP11BQ9Y2G3 1177 aa5.47□□□□□ -1.53
RNU6-553P-201ENST00000364047 MAP3K2Q9Y2U5 619 aa5.47□□□□□ -1.53
RNU6-553P-201ENST00000364047 UNC119BA6NIH7 251 aa5.46□□□□□ -1.54
RNU6-553P-201ENST00000364047 FZD9O00144 591 aa5.46□□□□□ -1.54
RNU6-553P-201ENST00000364047 SLC6A2P23975 617 aa5.46□□□□□ -1.54
RNU6-553P-201ENST00000364047 DDX6P26196 483 aaKnown RBP eCLIP5.46□□□□□ -1.54
RNU6-553P-201ENST00000364047 MXRA7P84157 204 aa5.46□□□□□ -1.54
RNU6-553P-201ENST00000364047 UBXN2BQ14CS0 331 aa5.46□□□□□ -1.54
RNU6-553P-201ENST00000364047 PTPN21Q16825 1174 aa5.46□□□□□ -1.54
RNU6-553P-201ENST00000364047 SEM1Q6ZVN7 128 aa5.46□□□□□ -1.54
RNU6-553P-201ENST00000364047 RSPH3Q86UC2 560 aa5.46□□□□□ -1.54
RNU6-553P-201ENST00000364047 RAB24Q969Q5 203 aa5.46□□□□□ -1.54
RNU6-553P-201ENST00000364047 HDAC10Q969S8 669 aa5.46□□□□□ -1.54
RNU6-553P-201ENST00000364047 TEKT5Q96M29 485 aa5.46□□□□□ -1.54
RNU6-553P-201ENST00000364047 SMAD5Q99717 465 aaKnown RBP5.46□□□□□ -1.54
RNU6-553P-201ENST00000364047 SLITRK6Q9H5Y7 841 aa5.46□□□□□ -1.54
RNU6-553P-201ENST00000364047 TDP1Q9NUW8 608 aa5.46□□□□□ -1.54
RNU6-553P-201ENST00000364047 KLHL11Q9NVR0 708 aa5.46□□□□□ -1.54
RNU6-553P-201ENST00000364047 PCDHA13Q9Y5I0 950 aa5.46□□□□□ -1.54
RNU6-553P-201ENST00000364047 FOXN1O15353 648 aa5.45□□□□□ -1.54
RNU6-553P-201ENST00000364047 SUV39H1O43463 412 aa5.45□□□□□ -1.54
RNU6-553P-201ENST00000364047 ALAS1P13196 640 aa5.45□□□□□ -1.54
RNU6-553P-201ENST00000364047 BMPR1AP36894 532 aa5.45□□□□□ -1.54
RNU6-553P-201ENST00000364047 KRT85P78386 507 aa5.45□□□□□ -1.54
RNU6-553P-201ENST00000364047 ATP8B2P98198 1209 aa5.45□□□□□ -1.54
RNU6-553P-201ENST00000364047 GUCY1B3Q02153 619 aa5.45□□□□□ -1.54
RNU6-553P-201ENST00000364047 KIF23Q02241 960 aaPredicted RBP5.45□□□□□ -1.54
RNU6-553P-201ENST00000364047 CREMQ03060 361 aa5.45□□□□□ -1.54
RNU6-553P-201ENST00000364047 ATP2B3Q16720 1220 aa5.45□□□□□ -1.54
RNU6-553P-201ENST00000364047 ARHGEF19Q8IW93 802 aa5.45□□□□□ -1.54
RNU6-553P-201ENST00000364047 TMX3Q96JJ7 454 aa5.45□□□□□ -1.54
RNU6-553P-201ENST00000364047 ZSWIM1Q9BR11 485 aa5.45□□□□□ -1.54
RNU6-553P-201ENST00000364047 RNPEPQ9H4A4 650 aa5.45□□□□□ -1.54
RNU6-553P-201ENST00000364047 SERHL2Q9H4I8 314 aa5.45□□□□□ -1.54
RNU6-553P-201ENST00000364047 FAM30AQ9NZY2 134 aa5.45□□□□□ -1.54
RNU6-553P-201ENST00000364047 WASHC2CQ9Y4E1 1318 aa5.45□□□□□ -1.54
RNU6-553P-201ENST00000364047 TCRBV7S2A1N4TA0A589 114 aa5.44□□□□□ -1.54
RNU6-553P-201ENST00000364047 MARCH11A6NNE9 402 aa5.44□□□□□ -1.54
RNU6-553P-201ENST00000364047 KIAA0391O15091 583 aaKnown RBP5.44□□□□□ -1.54
RNU6-553P-201ENST00000364047 B3GALT2O43825 422 aa5.44□□□□□ -1.54
RNU6-553P-201ENST00000364047 CFIP05156 583 aa5.44□□□□□ -1.54
RNU6-553P-201ENST00000364047 CTXN1P60606 82 aa5.44□□□□□ -1.54
RNU6-553P-201ENST00000364047 RESTQ13127 1097 aa5.44□□□□□ -1.54
RNU6-553P-201ENST00000364047 TARDBPQ13148 414 aaKnown RBP eCLIP5.44□□□□□ -1.54
RNU6-553P-201ENST00000364047 PTPROQ16827 1216 aa5.44□□□□□ -1.54
RNU6-553P-201ENST00000364047 C3orf36Q3SXR2 165 aa5.44□□□□□ -1.54
RNU6-553P-201ENST00000364047 CRB2Q5IJ48 1285 aa5.44□□□□□ -1.54
RNU6-553P-201ENST00000364047 EFCAB2Q5VUJ9 269 aa5.44□□□□□ -1.54
RNU6-553P-201ENST00000364047 MAPKAPK5Q8IW41 473 aa5.44□□□□□ -1.54
RNU6-553P-201ENST00000364047 ADAM2Q99965 735 aa5.44□□□□□ -1.54
RNU6-553P-201ENST00000364047 ASPSCR1Q9BZE9 553 aa5.44□□□□□ -1.54
RNU6-553P-201ENST00000364047 WDR11Q9BZH6 1224 aa5.44□□□□□ -1.54
RNU6-553P-201ENST00000364047 C11orf54Q9H0W9 315 aaPredicted RBP5.44□□□□□ -1.54
RNU6-553P-201ENST00000364047 CYP4F11Q9HBI6 524 aa5.44□□□□□ -1.54
RNU6-553P-201ENST00000364047 DKK2Q9UBU2 259 aa5.44□□□□□ -1.54
RNU6-553P-201ENST00000364047 LIMCH1Q9UPQ0 1083 aa5.44□□□□□ -1.54
RNU6-553P-201ENST00000364047 IPPQ9Y573 584 aa5.44□□□□□ -1.54
RNU6-553P-201ENST00000364047 DMRT1Q9Y5R6 373 aa5.44□□□□□ -1.54
RNU6-553P-201ENST00000364047 TNKSO95271 1327 aa5.44□□□□□ -1.54
RNU6-553P-201ENST00000364047 A0A1B0GTW7 788 aa5.43□□□□□ -1.54
RNU6-553P-201ENST00000364047 GRID2IPA4D2P6 1211 aa5.43□□□□□ -1.54
RNU6-553P-201ENST00000364047 ANKRD62A6NC57 917 aa5.43□□□□□ -1.54
RNU6-553P-201ENST00000364047 CCDC154A6NI56 674 aa5.43□□□□□ -1.54
RNU6-553P-201ENST00000364047 HTRA2O43464 458 aaPredicted RBP5.43□□□□□ -1.54
RNU6-553P-201ENST00000364047 PRSS23O95084 383 aa5.43□□□□□ -1.54
RNU6-553P-201ENST00000364047 SPDEFO95238 335 aa5.43□□□□□ -1.54
RNU6-553P-201ENST00000364047 GCSHP23434 173 aa5.43□□□□□ -1.54
RNU6-553P-201ENST00000364047 CCND1P24385 295 aa5.43□□□□□ -1.54
RNU6-553P-201ENST00000364047 ZEB1P37275 1124 aaPredicted RBP5.43□□□□□ -1.54
RNU6-553P-201ENST00000364047 CDC42EP1Q00587 391 aa5.43□□□□□ -1.54
RNU6-553P-201ENST00000364047 OCA2Q04671 838 aa5.43□□□□□ -1.54
RNU6-553P-201ENST00000364047 UAP1L1Q3KQV9 507 aa5.43□□□□□ -1.54
RNU6-553P-201ENST00000364047 SPDYE7PQ495Y7 208 aa5.43□□□□□ -1.54
RNU6-553P-201ENST00000364047 DACT2Q5SW24 774 aa5.43□□□□□ -1.54
RNU6-553P-201ENST00000364047 ARMC6Q6NXE6 501 aa5.43□□□□□ -1.54
RNU6-553P-201ENST00000364047 LCORLQ8N3X6 602 aa5.43□□□□□ -1.54
RNU6-553P-201ENST00000364047 FITM2Q8N6M3 262 aa5.43□□□□□ -1.54
RNU6-553P-201ENST00000364047 DCBLD1Q8N8Z6 715 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms