RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 GTPBP10A4D1E9 387 aaKnown RBP22.33■■□□□ 1.17
SHISA4-201ENST00000362011 GRXCR1A8MXD5 290 aa22.33■■□□□ 1.17
SHISA4-201ENST00000362011 MGEA5O60502 916 aa22.33■■□□□ 1.17
SHISA4-201ENST00000362011 TNNI1P19237 187 aa22.33■■□□□ 1.17
SHISA4-201ENST00000362011 MXI1P50539 228 aa22.33■■□□□ 1.17
SHISA4-201ENST00000362011 CLDN10P78369 228 aa22.33■■□□□ 1.17
SHISA4-201ENST00000362011 PPP3CAQ08209 521 aa22.33■■□□□ 1.17
SHISA4-201ENST00000362011 SYCP1Q15431 976 aa22.33■■□□□ 1.17
SHISA4-201ENST00000362011 PTPN21Q16825 1174 aa22.33■■□□□ 1.17
SHISA4-201ENST00000362011 PLEKHG4Q58EX7 1191 aa22.33■■□□□ 1.17
SHISA4-201ENST00000362011 ZNF365Q70YC5 407 aa22.33■■□□□ 1.17
SHISA4-201ENST00000362011 WDR49Q8IV35 697 aa22.33■■□□□ 1.17
SHISA4-201ENST00000362011 CD302Q8IX05 232 aa22.33■■□□□ 1.17
SHISA4-201ENST00000362011 SMG8Q8ND04 991 aaKnown RBP22.33■■□□□ 1.17
SHISA4-201ENST00000362011 HERVK_113Q902F9 699 aa22.33■■□□□ 1.17
SHISA4-201ENST00000362011 SEPT8Q92599 483 aa22.33■■□□□ 1.17
SHISA4-201ENST00000362011 APBB2Q92870 758 aa22.33■■□□□ 1.17
SHISA4-201ENST00000362011 SCLYQ96I15 445 aa22.33■■□□□ 1.17
SHISA4-201ENST00000362011 POP1Q99575 1024 aaKnown RBP22.33■■□□□ 1.17
SHISA4-201ENST00000362011 ADAM2Q99965 735 aa22.33■■□□□ 1.17
SHISA4-201ENST00000362011 TRAIPQ9BWF2 469 aa22.33■■□□□ 1.17
SHISA4-201ENST00000362011 APOL6Q9BWW8 343 aa22.33■■□□□ 1.17
SHISA4-201ENST00000362011 FTHL17Q9BXU8 183 aa22.33■■□□□ 1.17
SHISA4-201ENST00000362011 ASB7Q9H672 318 aa22.33■■□□□ 1.17
SHISA4-201ENST00000362011 TMEM8AQ9HCN3 771 aa22.33■■□□□ 1.17
SHISA4-201ENST00000362011 TOPORSQ9NS56 1045 aaPredicted RBP22.33■■□□□ 1.17
SHISA4-201ENST00000362011 PCDHB2Q9Y5E7 798 aa22.33■■□□□ 1.17
SHISA4-201ENST00000362011 ITIH6Q6UXX5 1313 aa22.33■■□□□ 1.17
SHISA4-201ENST00000362011 LACTBL1A8MY62 500 aa22.32■■□□□ 1.16
SHISA4-201ENST00000362011 RBAK-RBAKDNI3L0D1 243 aa22.32■■□□□ 1.16
SHISA4-201ENST00000362011 P4HA2O15460 535 aa22.32■■□□□ 1.16
SHISA4-201ENST00000362011 SKIP12755 728 aa22.32■■□□□ 1.16
SHISA4-201ENST00000362011 GCLMP48507 274 aa22.32■■□□□ 1.16
SHISA4-201ENST00000362011 AP3M2P53677 418 aa22.32■■□□□ 1.16
SHISA4-201ENST00000362011 GPNMBQ14956 572 aa22.32■■□□□ 1.16
SHISA4-201ENST00000362011 SLC10A6Q3KNW5 377 aa22.32■■□□□ 1.16
SHISA4-201ENST00000362011 CBWD6Q4V339 395 aa22.32■■□□□ 1.16
SHISA4-201ENST00000362011 CBWD3Q5JTY5 395 aa22.32■■□□□ 1.16
SHISA4-201ENST00000362011 CBWD5Q5RIA9 395 aa22.32■■□□□ 1.16
SHISA4-201ENST00000362011 SPECC1LQ69YQ0 1117 aa22.32■■□□□ 1.16
SHISA4-201ENST00000362011 GBP6Q6ZN66 633 aa22.32■■□□□ 1.16
SHISA4-201ENST00000362011 PCMTD1Q96MG8 357 aaPredicted RBP22.32■■□□□ 1.16
SHISA4-201ENST00000362011 PLEKHA5Q9HAU0 1116 aa22.32■■□□□ 1.16
SHISA4-201ENST00000362011 IL23AQ9NPF7 189 aa22.32■■□□□ 1.16
SHISA4-201ENST00000362011 HES2Q9Y543 173 aa22.32■■□□□ 1.16
SHISA4-201ENST00000362011 CHD9Q3L8U1 2897 aa22.32■■□□□ 1.16
SHISA4-201ENST00000362011 TTC26A0AVF1 554 aa22.31■■□□□ 1.16
SHISA4-201ENST00000362011 PMM2O15305 246 aa22.31■■□□□ 1.16
SHISA4-201ENST00000362011 RECQL4O94761 1208 aa22.31■■□□□ 1.16
SHISA4-201ENST00000362011 CXCL10P02778 98 aa22.31■■□□□ 1.16
SHISA4-201ENST00000362011 RFC2P35250 354 aa22.31■■□□□ 1.16
SHISA4-201ENST00000362011 CETN1Q12798 172 aa22.31■■□□□ 1.16
SHISA4-201ENST00000362011 LMBRD2Q68DH5 695 aaPredicted RBP22.31■■□□□ 1.16
SHISA4-201ENST00000362011 KRT39Q6A163 491 aa22.31■■□□□ 1.16
SHISA4-201ENST00000362011 SPC24Q8NBT2 197 aa22.31■■□□□ 1.16
SHISA4-201ENST00000362011 SNX27Q96L92 541 aa22.31■■□□□ 1.16
SHISA4-201ENST00000362011 PPP1R9BQ96SB3 815 aa22.31■■□□□ 1.16
SHISA4-201ENST00000362011 TMEM117Q9H0C3 514 aa22.31■■□□□ 1.16
SHISA4-201ENST00000362011 RGS18Q9NS28 235 aa22.31■■□□□ 1.16
SHISA4-201ENST00000362011 PARP2Q9UGN5 583 aa22.31■■□□□ 1.16
SHISA4-201ENST00000362011 SIK3Q9Y2K2 1263 aa22.31■■□□□ 1.16
SHISA4-201ENST00000362011 TTC3P53804 2025 aa22.31■■□□□ 1.16
SHISA4-201ENST00000362011 FNDC1Q4ZHG4 1894 aaPredicted RBP22.31■■□□□ 1.16
SHISA4-201ENST00000362011 PTPRJQ12913 1337 aa22.31■■□□□ 1.16
SHISA4-201ENST00000362011 GOLGA6L6A8MZA4 724 aa22.31■■□□□ 1.16
SHISA4-201ENST00000362011 ZNF623O75123 536 aa22.31■■□□□ 1.16
SHISA4-201ENST00000362011 ACRP10323 421 aa22.31■■□□□ 1.16
SHISA4-201ENST00000362011 ITGA4P13612 1032 aa22.31■■□□□ 1.16
SHISA4-201ENST00000362011 KCNMA1Q12791 1236 aa22.31■■□□□ 1.16
SHISA4-201ENST00000362011 EXOC3L4Q17RC7 722 aa22.31■■□□□ 1.16
SHISA4-201ENST00000362011 MRPL10Q7Z7H8 261 aaKnown RBP22.31■■□□□ 1.16
SHISA4-201ENST00000362011 DBF4BQ8NFT6 615 aa22.31■■□□□ 1.16
SHISA4-201ENST00000362011 ZNF516Q92618 1163 aa22.31■■□□□ 1.16
SHISA4-201ENST00000362011 ANKRD36BP1Q96IX9 119 aa22.31■■□□□ 1.16
SHISA4-201ENST00000362011 C1orf112Q9NSG2 853 aa22.31■■□□□ 1.16
SHISA4-201ENST00000362011 GCNT4Q9P109 453 aa22.31■■□□□ 1.16
SHISA4-201ENST00000362011 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.31■■□□□ 1.16
SHISA4-201ENST00000362011 A0A0U1RQF3 1178 aa22.3■■□□□ 1.16
SHISA4-201ENST00000362011 MEFVO15553 781 aaPredicted RBP22.3■■□□□ 1.16
SHISA4-201ENST00000362011 TMEM191BP0C7N4 346 aa22.3■■□□□ 1.16
SHISA4-201ENST00000362011 AKAP5P24588 427 aa22.3■■□□□ 1.16
SHISA4-201ENST00000362011 JADE1Q6IE81 842 aa22.3■■□□□ 1.16
SHISA4-201ENST00000362011 SV2AQ7L0J3 742 aa22.3■■□□□ 1.16
SHISA4-201ENST00000362011 NT5DC4Q86YG4 428 aa22.3■■□□□ 1.16
SHISA4-201ENST00000362011 EFCAB13Q8IY85 973 aa22.3■■□□□ 1.16
SHISA4-201ENST00000362011 ATXN2LQ8WWM7 1075 aaKnown RBP22.3■■□□□ 1.16
SHISA4-201ENST00000362011 PGBD4Q96DM1 585 aa22.3■■□□□ 1.16
SHISA4-201ENST00000362011 GAS2L1Q99501 681 aaPredicted RBP22.3■■□□□ 1.16
SHISA4-201ENST00000362011 CRACR2AQ9BSW2 395 aa22.3■■□□□ 1.16
SHISA4-201ENST00000362011 LSM14BQ9BX40 385 aaKnown RBP22.3■■□□□ 1.16
SHISA4-201ENST00000362011 CXXC1Q9P0U4 656 aaPredicted RBP22.3■■□□□ 1.16
SHISA4-201ENST00000362011 IMPACTQ9P2X3 320 aa22.3■■□□□ 1.16
SHISA4-201ENST00000362011 SCN1AP35498 2009 aa22.29■■□□□ 1.16
SHISA4-201ENST00000362011 TNNC2P02585 160 aa22.29■■□□□ 1.16
SHISA4-201ENST00000362011 C4BPAP04003 597 aaKnown RBP22.29■■□□□ 1.16
SHISA4-201ENST00000362011 BIRC3Q13489 604 aa22.29■■□□□ 1.16
SHISA4-201ENST00000362011 TRIM14Q14142 442 aa22.29■■□□□ 1.16
SHISA4-201ENST00000362011 ADGRE1Q14246 886 aa22.29■■□□□ 1.16
SHISA4-201ENST00000362011 TMEM132DQ14C87 1099 aa22.29■■□□□ 1.16
SHISA4-201ENST00000362011 RAB30Q15771 203 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms