RNA–Protein interactions for RNA: ENST00000360620.7

EPHB4-202, Transcript of EPH receptor B4, humanhuman

TSL 1 (best) BASIC

Gene EPHB4, Length 3,789 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-202ENST00000360620 RFX6Q8HWS3 928 aa12.71□□□□□ -0.37
EPHB4-202ENST00000360620 TBC1D16Q8TBP0 767 aa12.71□□□□□ -0.37
EPHB4-202ENST00000360620 TSNARE1Q96NA8 513 aa12.71□□□□□ -0.37
EPHB4-202ENST00000360620 CBWD1Q9BRT8 395 aa12.71□□□□□ -0.37
EPHB4-202ENST00000360620 FAM213AQ9BRX8 229 aa12.71□□□□□ -0.37
EPHB4-202ENST00000360620 SCAF8Q9UPN6 1271 aaKnown RBP12.71□□□□□ -0.37
EPHB4-202ENST00000360620 IQANK1A0A1B0GTG1 560 aa12.71□□□□□ -0.38
EPHB4-202ENST00000360620 PAEPP09466 180 aa12.71□□□□□ -0.38
EPHB4-202ENST00000360620 EIF2AK2P19525 551 aaKnown RBP12.71□□□□□ -0.38
EPHB4-202ENST00000360620 SLC1A1P43005 524 aa12.71□□□□□ -0.38
EPHB4-202ENST00000360620 NCALDP61601 193 aa12.71□□□□□ -0.38
EPHB4-202ENST00000360620 BSPRYQ5W0U4 402 aa12.71□□□□□ -0.38
EPHB4-202ENST00000360620 LMBRD2Q68DH5 695 aaPredicted RBP12.71□□□□□ -0.38
EPHB4-202ENST00000360620 LVRNQ6Q4G3 990 aa12.71□□□□□ -0.38
EPHB4-202ENST00000360620 MOXD1Q6UVY6 613 aa12.71□□□□□ -0.38
EPHB4-202ENST00000360620 C6orf89Q6UWU4 347 aa12.71□□□□□ -0.38
EPHB4-202ENST00000360620 TEX9Q8N6V9 391 aa12.71□□□□□ -0.38
EPHB4-202ENST00000360620 POP1Q99575 1024 aaKnown RBP12.71□□□□□ -0.38
EPHB4-202ENST00000360620 TRIM33Q9UPN9 1127 aa12.71□□□□□ -0.38
EPHB4-202ENST00000360620 ASTN1O14525 1302 aa12.7□□□□□ -0.38
EPHB4-202ENST00000360620 CASZ1Q86V15 1759 aa12.7□□□□□ -0.38
EPHB4-202ENST00000360620 KRT16P08779 473 aa12.7□□□□□ -0.38
EPHB4-202ENST00000360620 GZMAP12544 262 aa12.7□□□□□ -0.38
EPHB4-202ENST00000360620 POLR2BP30876 1174 aaKnown RBP12.7□□□□□ -0.38
EPHB4-202ENST00000360620 QARSP47897 775 aaKnown RBP12.7□□□□□ -0.38
EPHB4-202ENST00000360620 SNRNP35Q16560 246 aaKnown RBP12.7□□□□□ -0.38
EPHB4-202ENST00000360620 ATP11CQ8NB49 1132 aa12.7□□□□□ -0.38
EPHB4-202ENST00000360620 TLCD1Q96CP7 247 aa12.7□□□□□ -0.38
EPHB4-202ENST00000360620 MGRN1O60291 552 aa12.7□□□□□ -0.38
EPHB4-202ENST00000360620 CCDC22O60826 627 aa12.7□□□□□ -0.38
EPHB4-202ENST00000360620 IRX4P78413 519 aa12.7□□□□□ -0.38
EPHB4-202ENST00000360620 OVGP1Q12889 678 aa12.7□□□□□ -0.38
EPHB4-202ENST00000360620 RRP1BQ14684 758 aaKnown RBP12.7□□□□□ -0.38
EPHB4-202ENST00000360620 HIF1AQ16665 826 aa12.7□□□□□ -0.38
EPHB4-202ENST00000360620 ARSHQ5FYA8 562 aa12.7□□□□□ -0.38
EPHB4-202ENST00000360620 SLC47A2Q86VL8 602 aa12.7□□□□□ -0.38
EPHB4-202ENST00000360620 CCDC125Q86Z20 511 aa12.7□□□□□ -0.38
EPHB4-202ENST00000360620 MAGEC3Q8TD91 643 aa12.7□□□□□ -0.38
EPHB4-202ENST00000360620 SLC5A5Q92911 643 aa12.7□□□□□ -0.38
EPHB4-202ENST00000360620 IKZF4Q9H2S9 585 aa12.7□□□□□ -0.38
EPHB4-202ENST00000360620 DNAJC18Q9H819 358 aa12.7□□□□□ -0.38
EPHB4-202ENST00000360620 ZWILCHQ9H900 591 aa12.7□□□□□ -0.38
EPHB4-202ENST00000360620 CLRN2A0PK11 232 aa12.7□□□□□ -0.38
EPHB4-202ENST00000360620 C5orf60A6NFR6 353 aa12.7□□□□□ -0.38
EPHB4-202ENST00000360620 FAM86B1E9PN63 330 aa12.7□□□□□ -0.38
EPHB4-202ENST00000360620 MCF2LO15068 1137 aa12.7□□□□□ -0.38
EPHB4-202ENST00000360620 FAM86B2P0C5J1 330 aa12.7□□□□□ -0.38
EPHB4-202ENST00000360620 ARHGEF16Q5VV41 709 aa12.7□□□□□ -0.38
EPHB4-202ENST00000360620 NLRP9Q7RTR0 991 aa12.7□□□□□ -0.38
EPHB4-202ENST00000360620 HIPK4Q8NE63 616 aa12.7□□□□□ -0.38
EPHB4-202ENST00000360620 TEKT4Q8WW24 435 aa12.7□□□□□ -0.38
EPHB4-202ENST00000360620 ATP2A3Q93084 1043 aa12.7□□□□□ -0.38
EPHB4-202ENST00000360620 PRM3Q9NNZ6 103 aa12.7□□□□□ -0.38
EPHB4-202ENST00000360620 SEPT9Q9UHD8 586 aaPredicted RBP12.7□□□□□ -0.38
EPHB4-202ENST00000360620 MYH6P13533 1939 aa12.7□□□□□ -0.38
EPHB4-202ENST00000360620 COPEO14579 308 aa12.69□□□□□ -0.38
EPHB4-202ENST00000360620 LPXNO60711 386 aa12.69□□□□□ -0.38
EPHB4-202ENST00000360620 TAL1P17542 331 aaPredicted RBP12.69□□□□□ -0.38
EPHB4-202ENST00000360620 SREBF1P36956 1147 aa12.69□□□□□ -0.38
EPHB4-202ENST00000360620 POLGP54098 1239 aaPredicted RBP12.69□□□□□ -0.38
EPHB4-202ENST00000360620 KLHL38Q2WGJ6 581 aa12.69□□□□□ -0.38
EPHB4-202ENST00000360620 RHPN2Q8IUC4 686 aa12.69□□□□□ -0.38
EPHB4-202ENST00000360620 TRIM42Q8IWZ5 723 aa12.69□□□□□ -0.38
EPHB4-202ENST00000360620 RIBC1Q8N443 379 aaPredicted RBP12.69□□□□□ -0.38
EPHB4-202ENST00000360620 FGD4Q96M96 766 aa12.69□□□□□ -0.38
EPHB4-202ENST00000360620 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.69□□□□□ -0.381e-8■■□□□ 12.8
EPHB4-202ENST00000360620 NYAP2Q9P242 653 aa12.69□□□□□ -0.38
EPHB4-202ENST00000360620 ZBTB39O15060 712 aa12.69□□□□□ -0.38
EPHB4-202ENST00000360620 P4HA2O15460 535 aa12.69□□□□□ -0.38
EPHB4-202ENST00000360620 PPIP5K2O43314 1243 aa12.69□□□□□ -0.38
EPHB4-202ENST00000360620 PGM1P36871 562 aa12.69□□□□□ -0.38
EPHB4-202ENST00000360620 C1orf146Q5VVC0 180 aa12.69□□□□□ -0.38
EPHB4-202ENST00000360620 CDC42EP5Q6NZY7 148 aa12.69□□□□□ -0.38
EPHB4-202ENST00000360620 SCYL2Q6P3W7 929 aa12.69□□□□□ -0.38
EPHB4-202ENST00000360620 BZW1Q7L1Q6 419 aaKnown RBP12.69□□□□□ -0.38
EPHB4-202ENST00000360620 MCF2L2Q86YR7 1114 aa12.69□□□□□ -0.38
EPHB4-202ENST00000360620 CKAP2Q8WWK9 683 aa12.69□□□□□ -0.38
EPHB4-202ENST00000360620 PI4K2AQ9BTU6 479 aa12.69□□□□□ -0.38
EPHB4-202ENST00000360620 ACP6Q9NPH0 428 aa12.69□□□□□ -0.38
EPHB4-202ENST00000360620 PSMC3IPQ9P2W1 217 aaPredicted RBP12.69□□□□□ -0.38
EPHB4-202ENST00000360620 PCYOX1Q9UHG3 505 aa12.69□□□□□ -0.38
EPHB4-202ENST00000360620 TMEM59LQ9UK28 342 aa12.69□□□□□ -0.38
EPHB4-202ENST00000360620 NCANO14594 1321 aa12.69□□□□□ -0.38
EPHB4-202ENST00000360620 UBE4BO95155 1302 aa12.69□□□□□ -0.38
EPHB4-202ENST00000360620 CYP11B1P15538 503 aa12.69□□□□□ -0.38
EPHB4-202ENST00000360620 KCNA3P22001 575 aa12.69□□□□□ -0.38
EPHB4-202ENST00000360620 GNA15P30679 374 aa12.69□□□□□ -0.38
EPHB4-202ENST00000360620 ALDH1B1P30837 517 aa12.69□□□□□ -0.38
EPHB4-202ENST00000360620 SPDYE1Q8NFV5 336 aaPredicted RBP12.69□□□□□ -0.38
EPHB4-202ENST00000360620 PPP4R1Q8TF05 950 aa12.69□□□□□ -0.38
EPHB4-202ENST00000360620 KAT5Q92993 513 aa12.69□□□□□ -0.38
EPHB4-202ENST00000360620 GJD4Q96KN9 370 aaPredicted RBP12.69□□□□□ -0.38
EPHB4-202ENST00000360620 KCNMB3Q9NPA1 279 aa12.69□□□□□ -0.38
EPHB4-202ENST00000360620 CHST7Q9NS84 486 aa12.69□□□□□ -0.38
EPHB4-202ENST00000360620 H0YCG3 227 aa12.68□□□□□ -0.38
EPHB4-202ENST00000360620 EML1O00423 815 aa12.68□□□□□ -0.38
EPHB4-202ENST00000360620 KITP10721 976 aa12.68□□□□□ -0.38
EPHB4-202ENST00000360620 RCN1Q15293 331 aa12.68□□□□□ -0.38
EPHB4-202ENST00000360620 ARHGEF19Q8IW93 802 aa12.68□□□□□ -0.38
EPHB4-202ENST00000360620 RAB3IL1Q8TBN0 382 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms