RNA–Protein interactions for RNA: ENST00000355547.9

PDZD3-202, Transcript of PDZ domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD3, Length 2,252 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-202ENST00000355547 GLIS2Q9BZE0 524 aaPredicted RBP19.32■□□□□ 0.68
PDZD3-202ENST00000355547 CCDC113Q9H0I3 377 aa19.32■□□□□ 0.68
PDZD3-202ENST00000355547 CHST7Q9NS84 486 aa19.32■□□□□ 0.68
PDZD3-202ENST00000355547 ZNF219Q9P2Y4 722 aaPredicted RBP19.32■□□□□ 0.68
PDZD3-202ENST00000355547 ACSL3O95573 720 aa19.31■□□□□ 0.68
PDZD3-202ENST00000355547 ATP5DP30049 168 aa19.31■□□□□ 0.68
PDZD3-202ENST00000355547 SLC1A1P43005 524 aa19.31■□□□□ 0.68
PDZD3-202ENST00000355547 NPTX2P47972 431 aa19.31■□□□□ 0.68
PDZD3-202ENST00000355547 GCNT1Q02742 428 aa19.31■□□□□ 0.68
PDZD3-202ENST00000355547 ENOSF1Q7L5Y1 443 aa19.31■□□□□ 0.68
PDZD3-202ENST00000355547 DHX38Q92620 1227 aaKnown RBP19.31■□□□□ 0.68
PDZD3-202ENST00000355547 NTPCRQ9BSD7 190 aaKnown RBP19.31■□□□□ 0.68
PDZD3-202ENST00000355547 DCLK3Q9C098 648 aa19.31■□□□□ 0.68
PDZD3-202ENST00000355547 TOPORSQ9NS56 1045 aaPredicted RBP19.31■□□□□ 0.68
PDZD3-202ENST00000355547 ASIC3Q9UHC3 531 aa19.31■□□□□ 0.68
PDZD3-202ENST00000355547 MCM8Q9UJA3 840 aa19.31■□□□□ 0.68
PDZD3-202ENST00000355547 ANAPC7Q9UJX3 599 aa19.31■□□□□ 0.68
PDZD3-202ENST00000355547 TMEM120BA0PK00 339 aa19.31■□□□□ 0.68
PDZD3-202ENST00000355547 CFAP73A6NFT4 308 aa19.31■□□□□ 0.68
PDZD3-202ENST00000355547 PTP4A2Q12974 167 aa19.31■□□□□ 0.68
PDZD3-202ENST00000355547 SNX1Q13596 522 aa19.31■□□□□ 0.68
PDZD3-202ENST00000355547 FAM102BQ5T8I3 360 aa19.31■□□□□ 0.68
PDZD3-202ENST00000355547 SV2AQ7L0J3 742 aa19.31■□□□□ 0.68
PDZD3-202ENST00000355547 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.31■□□□□ 0.68
PDZD3-202ENST00000355547 MCOLN2Q8IZK6 566 aa19.31■□□□□ 0.68
PDZD3-202ENST00000355547 GRK7Q8WTQ7 553 aa19.31■□□□□ 0.68
PDZD3-202ENST00000355547 USP15Q9Y4E8 981 aaPredicted RBP19.31■□□□□ 0.68
PDZD3-202ENST00000355547 SCP2P22307 547 aa19.3■□□□□ 0.68
PDZD3-202ENST00000355547 SLC8A1P32418 973 aa19.3■□□□□ 0.68
PDZD3-202ENST00000355547 CYP24A1Q07973 514 aa19.3■□□□□ 0.68
PDZD3-202ENST00000355547 RIPK1Q13546 671 aa19.3■□□□□ 0.68
PDZD3-202ENST00000355547 XKR9Q5GH70 373 aa19.3■□□□□ 0.68
PDZD3-202ENST00000355547 HIBCHQ6NVY1 386 aaPredicted RBP19.3■□□□□ 0.68
PDZD3-202ENST00000355547 SLC39A4Q6P5W5 647 aa19.3■□□□□ 0.68
PDZD3-202ENST00000355547 CCDC63Q8NA47 563 aa19.3■□□□□ 0.68
PDZD3-202ENST00000355547 SYTL5Q8TDW5 730 aaPredicted RBP19.3■□□□□ 0.68
PDZD3-202ENST00000355547 SPIRE2Q8WWL2 714 aa19.3■□□□□ 0.68
PDZD3-202ENST00000355547 DDX27Q96GQ7 796 aaKnown RBP19.3■□□□□ 0.68
PDZD3-202ENST00000355547 HERPUD2Q9BSE4 406 aa19.3■□□□□ 0.68
PDZD3-202ENST00000355547 NEU2Q9Y3R4 380 aa19.3■□□□□ 0.68
PDZD3-202ENST00000355547 SORBS3O60504 671 aa19.3■□□□□ 0.68
PDZD3-202ENST00000355547 ZC3H11AO75152 810 aaKnown RBP eCLIP19.3■□□□□ 0.68
PDZD3-202ENST00000355547 MYBL1P10243 752 aa19.3■□□□□ 0.68
PDZD3-202ENST00000355547 JAK3P52333 1124 aa19.3■□□□□ 0.68
PDZD3-202ENST00000355547 ITGA8P53708 1063 aa19.3■□□□□ 0.68
PDZD3-202ENST00000355547 NEDD9Q14511 834 aa19.3■□□□□ 0.68
PDZD3-202ENST00000355547 GALNTL6Q49A17 601 aa19.3■□□□□ 0.68
PDZD3-202ENST00000355547 USP37Q86T82 979 aa19.3■□□□□ 0.68
PDZD3-202ENST00000355547 ATL2Q8NHH9 583 aa19.3■□□□□ 0.68
PDZD3-202ENST00000355547 ABCF3Q9NUQ8 709 aa19.3■□□□□ 0.68
PDZD3-202ENST00000355547 MAP3K20Q9NYL2 800 aaKnown RBP19.3■□□□□ 0.68
PDZD3-202ENST00000355547 MROH7Q68CQ1 1323 aa19.3■□□□□ 0.68
PDZD3-202ENST00000355547 ATP6V1G2O95670 118 aa19.29■□□□□ 0.68
PDZD3-202ENST00000355547 GAS8O95995 478 aa19.29■□□□□ 0.68
PDZD3-202ENST00000355547 CREB1P16220 341 aa19.29■□□□□ 0.68
PDZD3-202ENST00000355547 CENPCQ03188 943 aa19.29■□□□□ 0.68
PDZD3-202ENST00000355547 LLGL1Q15334 1064 aa19.29■□□□□ 0.68
PDZD3-202ENST00000355547 SPDYE2Q495Y8 402 aa19.29■□□□□ 0.68
PDZD3-202ENST00000355547 CKAP2Q8WWK9 683 aa19.29■□□□□ 0.68
PDZD3-202ENST00000355547 ATG4AQ8WYN0 398 aa19.29■□□□□ 0.68
PDZD3-202ENST00000355547 TRAIPQ9BWF2 469 aa19.29■□□□□ 0.68
PDZD3-202ENST00000355547 TRIM7Q9C029 511 aa19.29■□□□□ 0.68
PDZD3-202ENST00000355547 LGALS13Q9UHV8 139 aa19.29■□□□□ 0.68
PDZD3-202ENST00000355547 ZNFX1Q9P2E3 1918 aaKnown RBP19.29■□□□□ 0.68
PDZD3-202ENST00000355547 MYPNQ86TC9 1320 aa19.29■□□□□ 0.68
PDZD3-202ENST00000355547 DENND3A2RUS2 1198 aa19.28■□□□□ 0.68
PDZD3-202ENST00000355547 TCP11X1B4DZS4 312 aa19.28■□□□□ 0.68
PDZD3-202ENST00000355547 CCNE2O96020 404 aa19.28■□□□□ 0.68
PDZD3-202ENST00000355547 SFNP31947 248 aa19.28■□□□□ 0.68
PDZD3-202ENST00000355547 DMP1Q13316 513 aaPredicted RBP19.28■□□□□ 0.68
PDZD3-202ENST00000355547 KYNUQ16719 465 aa19.28■□□□□ 0.68
PDZD3-202ENST00000355547 TBC1D10BQ4KMP7 808 aaPredicted RBP19.28■□□□□ 0.68
PDZD3-202ENST00000355547 FKBP1CQ5VVH2 108 aa19.28■□□□□ 0.68
PDZD3-202ENST00000355547 PLA2G4FQ68DD2 849 aa19.28■□□□□ 0.68
PDZD3-202ENST00000355547 ZNF677Q86XU0 584 aa19.28■□□□□ 0.68
PDZD3-202ENST00000355547 SAMD3Q8N6K7 520 aa19.28■□□□□ 0.68
PDZD3-202ENST00000355547 CNKSR1Q969H4 720 aa19.28■□□□□ 0.68
PDZD3-202ENST00000355547 TRIM11Q96F44 468 aa19.28■□□□□ 0.68
PDZD3-202ENST00000355547 WDR64B1ANS9 1081 aa19.28■□□□□ 0.68
PDZD3-202ENST00000355547 SATB1Q01826 763 aa19.28■□□□□ 0.68
PDZD3-202ENST00000355547 KLF1Q13351 362 aaPredicted RBP19.28■□□□□ 0.68
PDZD3-202ENST00000355547 LRRC14Q15048 493 aa19.28■□□□□ 0.68
PDZD3-202ENST00000355547 DLGAP5Q15398 846 aa19.28■□□□□ 0.68
PDZD3-202ENST00000355547 RSBN1LQ6PCB5 846 aaPredicted RBP19.28■□□□□ 0.68
PDZD3-202ENST00000355547 OTUD6AQ7L8S5 288 aa19.28■□□□□ 0.68
PDZD3-202ENST00000355547 RELL1Q8IUW5 271 aa19.28■□□□□ 0.68
PDZD3-202ENST00000355547 SUPT20HQ8NEM7 779 aa19.28■□□□□ 0.68
PDZD3-202ENST00000355547 DYDC1Q8WWB3 177 aa19.28■□□□□ 0.68
PDZD3-202ENST00000355547 SCLT1Q96NL6 688 aa19.28■□□□□ 0.68
PDZD3-202ENST00000355547 GMLQ99445 158 aa19.28■□□□□ 0.68
PDZD3-202ENST00000355547 KIFC3Q9BVG8 833 aa19.28■□□□□ 0.68
PDZD3-202ENST00000355547 FGFR1OP2Q9NVK5 253 aa19.28■□□□□ 0.68
PDZD3-202ENST00000355547 ANAPC5Q9UJX4 755 aa19.28■□□□□ 0.68
PDZD3-202ENST00000355547 AGAP1Q9UPQ3 857 aa19.28■□□□□ 0.68
PDZD3-202ENST00000355547 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.28■□□□□ 0.68
PDZD3-202ENST00000355547 ATP9AO75110 1047 aa19.27■□□□□ 0.68
PDZD3-202ENST00000355547 KRT5P13647 590 aa19.27■□□□□ 0.68
PDZD3-202ENST00000355547 ATF2P15336 505 aa19.27■□□□□ 0.68
PDZD3-202ENST00000355547 SF3A3Q12874 501 aaKnown RBP eCLIP19.27■□□□□ 0.68
PDZD3-202ENST00000355547 MKRN4PQ13434 485 aaPredicted RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms