RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 UNC13DQ70J99 1090 aa1.94□□□□□ -2.1
BRCA1-202ENST00000354071 PIK3C3Q8NEB9 887 aa1.94□□□□□ -2.1
BRCA1-202ENST00000354071 OR56A3Q8NH54 315 aa1.94□□□□□ -2.1
BRCA1-202ENST00000354071 DDX55Q8NHQ9 600 aaKnown RBP eCLIP1.94□□□□□ -2.1
BRCA1-202ENST00000354071 STT3BQ8TCJ2 826 aa1.94□□□□□ -2.1
BRCA1-202ENST00000354071 RMDN3Q96TC7 470 aa1.94□□□□□ -2.1
BRCA1-202ENST00000354071 C7orf25Q9BPX7 421 aa1.94□□□□□ -2.1
BRCA1-202ENST00000354071 ISCA1Q9BUE6 129 aa1.94□□□□□ -2.1
BRCA1-202ENST00000354071 EPS8L2Q9H6S3 715 aa1.94□□□□□ -2.1
BRCA1-202ENST00000354071 GREM2Q9H772 168 aa1.94□□□□□ -2.1
BRCA1-202ENST00000354071 PNPLA8Q9NP80 782 aa1.94□□□□□ -2.1
BRCA1-202ENST00000354071 INCENPQ9NQS7 918 aa1.94□□□□□ -2.1
BRCA1-202ENST00000354071 TDP1Q9NUW8 608 aa1.94□□□□□ -2.1
BRCA1-202ENST00000354071 ADAMTS6Q9UKP5 1117 aa1.94□□□□□ -2.1
BRCA1-202ENST00000354071 TAF6LQ9Y6J9 622 aa1.94□□□□□ -2.1
BRCA1-202ENST00000354071 KDM5CP41229 1560 aa1.94□□□□□ -2.1
BRCA1-202ENST00000354071 PODXLO00592 558 aa1.94□□□□□ -2.1
BRCA1-202ENST00000354071 PHGDHO43175 533 aaKnown RBP1.94□□□□□ -2.1
BRCA1-202ENST00000354071 TIMM44O43615 452 aa1.94□□□□□ -2.1
BRCA1-202ENST00000354071 PRAMEF4O60810 478 aa1.94□□□□□ -2.1
BRCA1-202ENST00000354071 LMNAP02545 664 aaKnown RBP1.94□□□□□ -2.1
BRCA1-202ENST00000354071 DBHP09172 617 aa1.94□□□□□ -2.1
BRCA1-202ENST00000354071 DMDP11532 3685 aa1.94□□□□□ -2.1
BRCA1-202ENST00000354071 PEPDP12955 493 aa1.94□□□□□ -2.1
BRCA1-202ENST00000354071 TECP42680 631 aa1.94□□□□□ -2.1
BRCA1-202ENST00000354071 CTBP1Q13363 440 aa1.94□□□□□ -2.1
BRCA1-202ENST00000354071 IKZF1Q13422 519 aa1.94□□□□□ -2.1
BRCA1-202ENST00000354071 PRKG1Q13976 671 aa1.94□□□□□ -2.1
BRCA1-202ENST00000354071 CNGB1Q14028 1251 aaPredicted RBP1.94□□□□□ -2.1
BRCA1-202ENST00000354071 TIGD7Q6NT04 549 aaPredicted RBP1.94□□□□□ -2.1
BRCA1-202ENST00000354071 KLHDC10Q6PID8 442 aa1.94□□□□□ -2.1
BRCA1-202ENST00000354071 TEPPQ6URK8 271 aa1.94□□□□□ -2.1
BRCA1-202ENST00000354071 BTNL9Q6UXG8 535 aa1.94□□□□□ -2.1
BRCA1-202ENST00000354071 MICU3Q86XE3 530 aa1.94□□□□□ -2.1
BRCA1-202ENST00000354071 ZNF566Q969W8 418 aa1.94□□□□□ -2.1
BRCA1-202ENST00000354071 ASIC4Q96FT7 647 aa1.94□□□□□ -2.1
BRCA1-202ENST00000354071 TMEM41AQ96HV5 264 aa1.94□□□□□ -2.1
BRCA1-202ENST00000354071 ADI1Q9BV57 179 aa1.94□□□□□ -2.1
BRCA1-202ENST00000354071 DHX36Q9H2U1 1008 aaKnown RBP1.94□□□□□ -2.1
BRCA1-202ENST00000354071 SRRDQ9UH36 339 aa1.94□□□□□ -2.1
BRCA1-202ENST00000354071 SRP68Q9UHB9 627 aaKnown RBP1.94□□□□□ -2.1
BRCA1-202ENST00000354071 ACTL7AQ9Y615 435 aa1.94□□□□□ -2.1
BRCA1-202ENST00000354071 PRDM2Q13029 1718 aa1.94□□□□□ -2.1
BRCA1-202ENST00000354071 F8W031 263 aaPredicted RBP1.93□□□□□ -2.1
BRCA1-202ENST00000354071 F2RL2O00254 374 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 SEC24DO94855 1032 aaPredicted RBP1.93□□□□□ -2.1
BRCA1-202ENST00000354071 MATN4O95460 622 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 LY86O95711 162 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 KRT1P04264 644 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 CD8BP10966 210 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 MYL4P12829 197 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 CLCN7P51798 805 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 SOX8P57073 446 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 TLE1Q04724 770 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 CUL4BQ13620 913 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 FGL2Q14314 439 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 SMAD1Q15797 465 aaKnown RBP1.93□□□□□ -2.1
BRCA1-202ENST00000354071 SKIDA1Q1XH10 827 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 HYIQ5T013 277 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 C1QTNF12Q5T7M4 302 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 KANK2Q63ZY3 851 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 RNF43Q68DV7 783 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 KCTD20Q7Z5Y7 419 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 MOGAT3Q86VF5 341 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 CDYL2Q8N8U2 506 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 DCAF11Q8TEB1 546 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 FOXB1Q99853 325 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 CHCHD6Q9BRQ6 235 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 PITHD1Q9GZP4 211 aaPredicted RBP1.93□□□□□ -2.1
BRCA1-202ENST00000354071 SMURF2Q9HAU4 748 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 RBM12Q9NTZ6 932 aaKnown RBP1.93□□□□□ -2.1
BRCA1-202ENST00000354071 FTSJ1Q9UET6 329 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 RAXQ9Y2V3 346 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 ASB1Q9Y576 335 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 A0A1W2PQ45 241 aaPredicted RBP1.93□□□□□ -2.1
BRCA1-202ENST00000354071 A0A1W2PQY0 241 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 CYP26A1O43174 497 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 COBLO75128 1261 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 GJA4P35212 333 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 ALDH1A3P47895 512 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 NCKAP1LP55160 1127 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 PRR5P85299 388 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 ZBED6P86452 979 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 ROM1Q03395 351 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 SPARCL1Q14515 664 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 PDCD2Q16342 344 aaPredicted RBP1.93□□□□□ -2.1
BRCA1-202ENST00000354071 ZACNQ401N2 412 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 DACT2Q5SW24 774 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 LCE4AQ5TA78 99 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 VPS53Q5VIR6 699 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 RETSATQ6NUM9 610 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 RRAGAQ7L523 313 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 STPG3Q8N7X2 389 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 ATP11CQ8NB49 1132 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 OR5AN1Q8NGI8 311 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 NETO1Q8TDF5 533 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 RAPGEF4Q8WZA2 1011 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 FAM167BQ9BTA0 163 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 SLC26A6Q9BXS9 759 aa1.93□□□□□ -2.1
BRCA1-202ENST00000354071 OSBPL1AQ9BXW6 950 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms