RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 CEP63Q96MT8 703 aa8.99□□□□□ -0.97
CD44-205ENST00000352818 RIT2Q99578 217 aa8.99□□□□□ -0.97
CD44-205ENST00000352818 DNAJC7Q99615 494 aa8.99□□□□□ -0.97
CD44-205ENST00000352818 TCF25Q9BQ70 676 aa8.99□□□□□ -0.97
CD44-205ENST00000352818 MXRA8Q9BRK3 442 aa8.99□□□□□ -0.97
CD44-205ENST00000352818 TUBGCP2Q9BSJ2 902 aa8.99□□□□□ -0.97
CD44-205ENST00000352818 NUP58Q9BVL2 599 aa8.99□□□□□ -0.97
CD44-205ENST00000352818 VPS16Q9H269 839 aa8.99□□□□□ -0.97
CD44-205ENST00000352818 AGO3Q9H9G7 860 aaKnown RBP8.99□□□□□ -0.97
CD44-205ENST00000352818 SLC39A2Q9NP94 309 aa8.99□□□□□ -0.97
CD44-205ENST00000352818 RXFP3Q9NSD7 469 aa8.99□□□□□ -0.97
CD44-205ENST00000352818 KCND2Q9NZV8 630 aa8.99□□□□□ -0.97
CD44-205ENST00000352818 DNM3Q9UQ16 869 aa8.99□□□□□ -0.97
CD44-205ENST00000352818 PPP2R2CQ9Y2T4 447 aa8.99□□□□□ -0.97
CD44-205ENST00000352818 MTF2Q9Y483 593 aaPredicted RBP8.99□□□□□ -0.97
CD44-205ENST00000352818 PTPN13Q12923 2485 aa8.98□□□□□ -0.97
CD44-205ENST00000352818 SPTA1P02549 2419 aa8.98□□□□□ -0.97
CD44-205ENST00000352818 TMEM8BA6NDV4 472 aa8.98□□□□□ -0.97
CD44-205ENST00000352818 RIOK3O14730 519 aaKnown RBP8.98□□□□□ -0.97
CD44-205ENST00000352818 CTIFO43310 598 aaKnown RBP8.98□□□□□ -0.97
CD44-205ENST00000352818 GAS7O60861 476 aa8.98□□□□□ -0.97
CD44-205ENST00000352818 GNA14O95837 355 aa8.98□□□□□ -0.97
CD44-205ENST00000352818 TDGF1P13385 188 aa8.98□□□□□ -0.97
CD44-205ENST00000352818 GAP43P17677 238 aa8.98□□□□□ -0.97
CD44-205ENST00000352818 CASP14P31944 242 aa8.98□□□□□ -0.97
CD44-205ENST00000352818 MARSP56192 900 aaKnown RBP8.98□□□□□ -0.97
CD44-205ENST00000352818 ETF1P62495 437 aaKnown RBP8.98□□□□□ -0.97
CD44-205ENST00000352818 UBXN1Q04323 297 aa8.98□□□□□ -0.97
CD44-205ENST00000352818 GOLGA8FQ08AF8 430 aa8.98□□□□□ -0.97
CD44-205ENST00000352818 GOLGA8DPQ0D2H9 430 aa8.98□□□□□ -0.97
CD44-205ENST00000352818 GIT2Q14161 759 aa8.98□□□□□ -0.97
CD44-205ENST00000352818 EPHA7Q15375 998 aa8.98□□□□□ -0.97
CD44-205ENST00000352818 CSRP2Q16527 193 aa8.98□□□□□ -0.97
CD44-205ENST00000352818 MAN2A1Q16706 1144 aa8.98□□□□□ -0.97
CD44-205ENST00000352818 EDRF1Q3B7T1 1238 aa8.98□□□□□ -0.97
CD44-205ENST00000352818 HSDL1Q3SXM5 330 aa8.98□□□□□ -0.97
CD44-205ENST00000352818 MIIPQ5JXC2 388 aa8.98□□□□□ -0.97
CD44-205ENST00000352818 ATAT1Q5SQI0 421 aa8.98□□□□□ -0.97
CD44-205ENST00000352818 LRCH2Q5VUJ6 765 aa8.98□□□□□ -0.97
CD44-205ENST00000352818 PCNX4Q63HM2 1172 aa8.98□□□□□ -0.97
CD44-205ENST00000352818 EPM2AIP1Q7L775 607 aaPredicted RBP8.98□□□□□ -0.97
CD44-205ENST00000352818 NPAS4Q8IUM7 802 aa8.98□□□□□ -0.97
CD44-205ENST00000352818 TMTC1Q8IUR5 882 aa8.98□□□□□ -0.97
CD44-205ENST00000352818 SLC44A3Q8N4M1 653 aa8.98□□□□□ -0.97
CD44-205ENST00000352818 ZCCHC14Q8WYQ9 949 aaKnown RBP8.98□□□□□ -0.97
CD44-205ENST00000352818 DDX1Q92499 740 aaKnown RBP8.98□□□□□ -0.97
CD44-205ENST00000352818 HSD17B14Q9BPX1 270 aa8.98□□□□□ -0.97
CD44-205ENST00000352818 EIF2AK1Q9BQI3 630 aaKnown RBP8.98□□□□□ -0.97
CD44-205ENST00000352818 TTYH3Q9C0H2 523 aa8.98□□□□□ -0.97
CD44-205ENST00000352818 ARHGEF3Q9NR81 526 aa8.98□□□□□ -0.97
CD44-205ENST00000352818 ABHD10Q9NUJ1 306 aa8.98□□□□□ -0.97
CD44-205ENST00000352818 TRMT1Q9NXH9 659 aaKnown RBP8.98□□□□□ -0.97
CD44-205ENST00000352818 GMEB2Q9UKD1 530 aa8.98□□□□□ -0.97
CD44-205ENST00000352818 CAPN11Q9UMQ6 739 aa8.98□□□□□ -0.97
CD44-205ENST00000352818 UBIAD1Q9Y5Z9 338 aa8.98□□□□□ -0.97
CD44-205ENST00000352818 UBE4BO95155 1302 aa8.98□□□□□ -0.97
CD44-205ENST00000352818 DENND4AQ7Z401 1863 aa8.98□□□□□ -0.97
CD44-205ENST00000352818 LAMA1P25391 3075 aa8.97□□□□□ -0.97
CD44-205ENST00000352818 C2orf71A6NGG8 1288 aa8.97□□□□□ -0.97
CD44-205ENST00000352818 EML1O00423 815 aa8.97□□□□□ -0.97
CD44-205ENST00000352818 KCNK5O95279 499 aa8.97□□□□□ -0.97
CD44-205ENST00000352818 PRKCSHP14314 528 aaPredicted RBP8.97□□□□□ -0.97
CD44-205ENST00000352818 MTIF2P46199 727 aaKnown RBP8.97□□□□□ -0.97
CD44-205ENST00000352818 FKBP3Q00688 224 aaKnown RBP8.97□□□□□ -0.97
CD44-205ENST00000352818 MEA1Q16626 185 aa8.97□□□□□ -0.97
CD44-205ENST00000352818 ARSHQ5FYA8 562 aa8.97□□□□□ -0.97
CD44-205ENST00000352818 FBXO47Q5MNV8 452 aa8.97□□□□□ -0.97
CD44-205ENST00000352818 CYP26C1Q6V0L0 522 aa8.97□□□□□ -0.97
CD44-205ENST00000352818 RUFY4Q6ZNE9 571 aa8.97□□□□□ -0.97
CD44-205ENST00000352818 PDZD3Q86UT5 571 aa8.97□□□□□ -0.97
CD44-205ENST00000352818 COLGALT1Q8NBJ5 622 aa8.97□□□□□ -0.97
CD44-205ENST00000352818 DNERQ8NFT8 737 aa8.97□□□□□ -0.97
CD44-205ENST00000352818 TBC1D5Q92609 795 aa8.97□□□□□ -0.97
CD44-205ENST00000352818 HNRNPABQ99729 332 aaKnown RBP8.97□□□□□ -0.97
CD44-205ENST00000352818 ZNF577Q9BSK1 485 aa8.97□□□□□ -0.97
CD44-205ENST00000352818 TEKT3Q9BXF9 490 aa8.97□□□□□ -0.97
CD44-205ENST00000352818 ADAM33Q9BZ11 813 aa8.97□□□□□ -0.97
CD44-205ENST00000352818 EDEM3Q9BZQ6 932 aa8.97□□□□□ -0.97
CD44-205ENST00000352818 KCTD10Q9H3F6 313 aa8.97□□□□□ -0.97
CD44-205ENST00000352818 L2HGDHQ9H9P8 463 aa8.97□□□□□ -0.97
CD44-205ENST00000352818 OLFML3Q9NRN5 406 aa8.97□□□□□ -0.97
CD44-205ENST00000352818 SETD4Q9NVD3 440 aa8.97□□□□□ -0.97
CD44-205ENST00000352818 SPATA6Q9NWH7 488 aaPredicted RBP8.97□□□□□ -0.97
CD44-205ENST00000352818 COL20A1Q9P218 1284 aa8.97□□□□□ -0.97
CD44-205ENST00000352818 IGSF9Q9P2J2 1179 aa8.97□□□□□ -0.97
CD44-205ENST00000352818 SEL1LQ9UBV2 794 aa8.97□□□□□ -0.97
CD44-205ENST00000352818 LZTS1Q9Y250 596 aa8.97□□□□□ -0.97
CD44-205ENST00000352818 ADGRG1Q9Y653 693 aa8.97□□□□□ -0.97
CD44-205ENST00000352818 B4DLN1 442 aa8.96□□□□□ -0.98
CD44-205ENST00000352818 IPO5O00410 1097 aaKnown RBP8.96□□□□□ -0.98
CD44-205ENST00000352818 EIF3DO15371 548 aaKnown RBP eCLIP8.96□□□□□ -0.98
CD44-205ENST00000352818 LAMTOR5O43504 91 aa8.96□□□□□ -0.98
CD44-205ENST00000352818 SORBS3O60504 671 aa8.96□□□□□ -0.98
CD44-205ENST00000352818 LRP3O75074 770 aa8.96□□□□□ -0.98
CD44-205ENST00000352818 PPFIA4O75335 1185 aa8.96□□□□□ -0.98
CD44-205ENST00000352818 LYPLA2O95372 231 aa8.96□□□□□ -0.98
CD44-205ENST00000352818 SSBP05455 408 aaKnown RBP eCLIP8.96□□□□□ -0.98
CD44-205ENST00000352818 KRT18P05783 430 aaKnown RBP8.96□□□□□ -0.98
CD44-205ENST00000352818 RETP07949 1114 aa8.96□□□□□ -0.98
CD44-205ENST00000352818 CCDC175P0C221 793 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms