RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 NANOGNBQ7Z5D8 188 aa12.74□□□□□ -0.37
COL12A1-202ENST00000345356 PATL1Q86TB9 770 aaKnown RBP12.74□□□□□ -0.37
COL12A1-202ENST00000345356 FBXO25Q8TCJ0 367 aa12.74□□□□□ -0.37
COL12A1-202ENST00000345356 INPP5DQ92835 1189 aa12.74□□□□□ -0.37
COL12A1-202ENST00000345356 KLHL8Q9P2G9 620 aaPredicted RBP12.74□□□□□ -0.37
COL12A1-202ENST00000345356 EMSYQ7Z589 1322 aa12.74□□□□□ -0.37
COL12A1-202ENST00000345356 FKBP6O75344 327 aa12.74□□□□□ -0.37
COL12A1-202ENST00000345356 OTUD4Q01804 1114 aaKnown RBP12.74□□□□□ -0.37
COL12A1-202ENST00000345356 PAWRQ96IZ0 340 aaKnown RBP12.74□□□□□ -0.37
COL12A1-202ENST00000345356 HEXIM2Q96MH2 286 aaKnown RBP12.74□□□□□ -0.37
COL12A1-202ENST00000345356 UNC45AQ9H3U1 944 aa12.74□□□□□ -0.37
COL12A1-202ENST00000345356 ABCF3Q9NUQ8 709 aa12.74□□□□□ -0.37
COL12A1-202ENST00000345356 UVRAGQ9P2Y5 699 aa12.74□□□□□ -0.37
COL12A1-202ENST00000345356 LAMC1P11047 1609 aa12.74□□□□□ -0.37
COL12A1-202ENST00000345356 HLA-DPA1P20036 260 aa12.74□□□□□ -0.37
COL12A1-202ENST00000345356 NUP107P57740 925 aa12.74□□□□□ -0.37
COL12A1-202ENST00000345356 ORC2Q13416 577 aaPredicted RBP12.74□□□□□ -0.37
COL12A1-202ENST00000345356 WLSQ5T9L3 541 aa12.74□□□□□ -0.37
COL12A1-202ENST00000345356 NLRP10Q86W26 655 aa12.74□□□□□ -0.37
COL12A1-202ENST00000345356 SPICE1Q8N0Z3 855 aa12.74□□□□□ -0.37
COL12A1-202ENST00000345356 ASNSD1Q9NWL6 643 aa12.74□□□□□ -0.37
COL12A1-202ENST00000345356 TMA7Q9Y2S6 64 aaKnown RBP12.74□□□□□ -0.37
COL12A1-202ENST00000345356 AK9Q5TCS8 1911 aa12.74□□□□□ -0.37
COL12A1-202ENST00000345356 H7C1W4 665 aa12.73□□□□□ -0.37
COL12A1-202ENST00000345356 NFIBO00712 420 aa12.73□□□□□ -0.37
COL12A1-202ENST00000345356 NR1H4Q96RI1 486 aaPredicted RBP12.73□□□□□ -0.37
COL12A1-202ENST00000345356 PAIP1Q9H074 479 aaKnown RBP12.73□□□□□ -0.37
COL12A1-202ENST00000345356 RNPEPL1Q9HAU8 725 aa12.73□□□□□ -0.37
COL12A1-202ENST00000345356 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.73□□□□□ -0.37
COL12A1-202ENST00000345356 BARHL2Q9NY43 387 aa12.73□□□□□ -0.37
COL12A1-202ENST00000345356 HPSEQ9Y251 543 aa12.73□□□□□ -0.37
COL12A1-202ENST00000345356 SLC4A1P02730 911 aa12.73□□□□□ -0.37
COL12A1-202ENST00000345356 WEE2P0C1S8 567 aa12.73□□□□□ -0.37
COL12A1-202ENST00000345356 MYL2P10916 166 aa12.73□□□□□ -0.37
COL12A1-202ENST00000345356 ALX1Q15699 326 aa12.73□□□□□ -0.37
COL12A1-202ENST00000345356 C4orf50Q6ZRC1 276 aa12.73□□□□□ -0.37
COL12A1-202ENST00000345356 KRT27Q7Z3Y8 459 aa12.73□□□□□ -0.37
COL12A1-202ENST00000345356 C7orf31Q8N865 590 aa12.73□□□□□ -0.37
COL12A1-202ENST00000345356 CDC26Q8NHZ8 85 aa12.73□□□□□ -0.37
COL12A1-202ENST00000345356 CYP39A1Q9NYL5 469 aa12.73□□□□□ -0.37
COL12A1-202ENST00000345356 APPL1Q9UKG1 709 aa12.73□□□□□ -0.37
COL12A1-202ENST00000345356 CCPG1Q9ULG6 757 aa12.73□□□□□ -0.37
COL12A1-202ENST00000345356 A0A087X0T9 212 aa12.73□□□□□ -0.37
COL12A1-202ENST00000345356 TBC1D4O60343 1298 aa12.73□□□□□ -0.37
COL12A1-202ENST00000345356 FAM228BP0C875 321 aa12.73□□□□□ -0.37
COL12A1-202ENST00000345356 CCNHP51946 323 aaPredicted RBP12.73□□□□□ -0.37
COL12A1-202ENST00000345356 GEMIN4P57678 1058 aaKnown RBP12.73□□□□□ -0.37
COL12A1-202ENST00000345356 DCTN2Q13561 401 aaKnown RBP12.73□□□□□ -0.37
COL12A1-202ENST00000345356 PTPAQ15257 358 aa12.73□□□□□ -0.37
COL12A1-202ENST00000345356 TRMT5Q32P41 509 aaKnown RBP12.73□□□□□ -0.37
COL12A1-202ENST00000345356 FASTKD1Q53R41 847 aaKnown RBP12.73□□□□□ -0.37
COL12A1-202ENST00000345356 ZBTB33Q86T24 672 aa12.73□□□□□ -0.37
COL12A1-202ENST00000345356 SLC30A5Q8TAD4 765 aa12.73□□□□□ -0.37
COL12A1-202ENST00000345356 FAM111AQ96PZ2 611 aa12.73□□□□□ -0.37
COL12A1-202ENST00000345356 TMEM165Q9HC07 324 aa12.73□□□□□ -0.37
COL12A1-202ENST00000345356 XPO7Q9UIA9 1087 aaKnown RBP12.73□□□□□ -0.37
COL12A1-202ENST00000345356 ANGPT2O15123 496 aa12.73□□□□□ -0.37
COL12A1-202ENST00000345356 TDP2O95551 362 aa12.73□□□□□ -0.37
COL12A1-202ENST00000345356 NLRP11P59045 1033 aaKnown RBP12.73□□□□□ -0.37
COL12A1-202ENST00000345356 UBE3AQ05086 875 aa12.73□□□□□ -0.37
COL12A1-202ENST00000345356 TBX2Q13207 712 aaPredicted RBP12.73□□□□□ -0.37
COL12A1-202ENST00000345356 HORMAD1Q86X24 394 aa12.73□□□□□ -0.37
COL12A1-202ENST00000345356 MSL3Q8N5Y2 521 aaKnown RBP12.73□□□□□ -0.37
COL12A1-202ENST00000345356 ACTRT1Q8TDG2 376 aa12.73□□□□□ -0.37
COL12A1-202ENST00000345356 ATXN2LQ8WWM7 1075 aaKnown RBP12.73□□□□□ -0.37
COL12A1-202ENST00000345356 NGLY1Q96IV0 654 aa12.73□□□□□ -0.37
COL12A1-202ENST00000345356 PARVBQ9HBI1 364 aa12.73□□□□□ -0.37
COL12A1-202ENST00000345356 GGA2Q9UJY4 613 aa12.73□□□□□ -0.37
COL12A1-202ENST00000345356 PCDHA6Q9UN73 950 aa12.73□□□□□ -0.37
COL12A1-202ENST00000345356 CAB39Q9Y376 341 aaPredicted RBP12.73□□□□□ -0.37
COL12A1-202ENST00000345356 PCDHA8Q9Y5H6 950 aa12.73□□□□□ -0.37
COL12A1-202ENST00000345356 OATP04181 439 aa12.73□□□□□ -0.37
COL12A1-202ENST00000345356 HSPA1AP0DMV8 641 aaKnown RBP12.73□□□□□ -0.37
COL12A1-202ENST00000345356 HSPA1BP0DMV9 641 aaKnown RBP12.73□□□□□ -0.37
COL12A1-202ENST00000345356 CYP2D6P10635 497 aa12.73□□□□□ -0.37
COL12A1-202ENST00000345356 GNA15P30679 374 aa12.73□□□□□ -0.37
COL12A1-202ENST00000345356 HOXA13P31271 388 aaPredicted RBP12.73□□□□□ -0.37
COL12A1-202ENST00000345356 NUDT2P50583 147 aa12.73□□□□□ -0.37
COL12A1-202ENST00000345356 EIF3EP60228 445 aaKnown RBP12.73□□□□□ -0.37
COL12A1-202ENST00000345356 MTM1Q13496 603 aa12.73□□□□□ -0.37
COL12A1-202ENST00000345356 SLC7A3Q8WY07 619 aa12.73□□□□□ -0.37
COL12A1-202ENST00000345356 ZFYVE19Q96K21 471 aa12.73□□□□□ -0.37
COL12A1-202ENST00000345356 UBAP1Q9NZ09 502 aa12.73□□□□□ -0.37
COL12A1-202ENST00000345356 APEX2Q9UBZ4 518 aa12.73□□□□□ -0.37
COL12A1-202ENST00000345356 ZC3H7BQ9UGR2 993 aaKnown RBP12.73□□□□□ -0.37
COL12A1-202ENST00000345356 PALLDQ8WX93 1383 aa12.72□□□□□ -0.37
COL12A1-202ENST00000345356 PDXKO00764 312 aa12.72□□□□□ -0.37
COL12A1-202ENST00000345356 OCM2P0CE71 109 aa12.72□□□□□ -0.37
COL12A1-202ENST00000345356 OCMP0CE72 109 aaPredicted RBP12.72□□□□□ -0.37
COL12A1-202ENST00000345356 CLK1P49759 484 aaKnown RBP12.72□□□□□ -0.37
COL12A1-202ENST00000345356 MFSD4BQ5TF39 518 aa12.72□□□□□ -0.37
COL12A1-202ENST00000345356 ZNF184Q99676 751 aaPredicted RBP12.72□□□□□ -0.37
COL12A1-202ENST00000345356 PICK1Q9NRD5 415 aa12.72□□□□□ -0.37
COL12A1-202ENST00000345356 NPHP3-ACAD11A0A0J9YXS1 232 aa12.72□□□□□ -0.37
COL12A1-202ENST00000345356 WBP4O75554 376 aaKnown RBP12.72□□□□□ -0.37
COL12A1-202ENST00000345356 BCAR1P56945 870 aa12.72□□□□□ -0.37
COL12A1-202ENST00000345356 EFHC1Q5JVL4 640 aa12.72□□□□□ -0.37
COL12A1-202ENST00000345356 CCDC80Q76M96 950 aa12.72□□□□□ -0.37
COL12A1-202ENST00000345356 NUP93Q8N1F7 819 aa12.72□□□□□ -0.37
COL12A1-202ENST00000345356 ARL10Q8N8L6 244 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms