RNA–Protein interactions for RNA: ENST00000341529.7

CDH5-201, Transcript of cadherin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH5, Length 4,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-201ENST00000341529 TBX20Q9UMR3 447 aa12.69□□□□□ -0.38
CDH5-201ENST00000341529 FAM187AA6NFU0 413 aa12.69□□□□□ -0.38
CDH5-201ENST00000341529 MEFVO15553 781 aaPredicted RBP12.69□□□□□ -0.38
CDH5-201ENST00000341529 KRT3P12035 628 aa12.69□□□□□ -0.38
CDH5-201ENST00000341529 TSNAXIP1Q2TAA8 658 aa12.69□□□□□ -0.38
CDH5-201ENST00000341529 SHISA4Q96DD7 197 aa12.69□□□□□ -0.38
CDH5-201ENST00000341529 FAM167BQ9BTA0 163 aa12.69□□□□□ -0.38
CDH5-201ENST00000341529 EPN3Q9H201 632 aa12.69□□□□□ -0.38
CDH5-201ENST00000341529 SEMA4AQ9H3S1 761 aa12.69□□□□□ -0.38
CDH5-201ENST00000341529 MARCOQ9UEW3 520 aaPredicted RBP12.69□□□□□ -0.38
CDH5-201ENST00000341529 HACL1Q9UJ83 578 aa12.69□□□□□ -0.38
CDH5-201ENST00000341529 PRDM4Q9UKN5 801 aa12.69□□□□□ -0.38
CDH5-201ENST00000341529 AGAP1Q9UPQ3 857 aa12.69□□□□□ -0.38
CDH5-201ENST00000341529 PHF2O75151 1096 aa12.69□□□□□ -0.38
CDH5-201ENST00000341529 PRKCBP05771 671 aa12.69□□□□□ -0.38
CDH5-201ENST00000341529 CALRP27797 417 aaKnown RBP12.69□□□□□ -0.38
CDH5-201ENST00000341529 ARL4AP40617 200 aa12.69□□□□□ -0.38
CDH5-201ENST00000341529 ITGA8P53708 1063 aa12.69□□□□□ -0.38
CDH5-201ENST00000341529 ACTR2P61160 394 aa12.69□□□□□ -0.38
CDH5-201ENST00000341529 SARNPP82979 210 aaKnown RBP12.69□□□□□ -0.38
CDH5-201ENST00000341529 TMPRSS15P98073 1019 aa12.69□□□□□ -0.38
CDH5-201ENST00000341529 MYO1EQ12965 1108 aa12.69□□□□□ -0.38
CDH5-201ENST00000341529 SV2AQ7L0J3 742 aa12.69□□□□□ -0.38
CDH5-201ENST00000341529 OTOP1Q7RTM1 612 aa12.69□□□□□ -0.38
CDH5-201ENST00000341529 C1orf131Q8NDD1 294 aaKnown RBP12.69□□□□□ -0.38
CDH5-201ENST00000341529 KRT35Q92764 455 aa12.69□□□□□ -0.38
CDH5-201ENST00000341529 DDX23Q9BUQ8 820 aaKnown RBP12.69□□□□□ -0.38
CDH5-201ENST00000341529 PIAS1O75925 651 aa12.69□□□□□ -0.38
CDH5-201ENST00000341529 MEA1Q16626 185 aa12.69□□□□□ -0.38
CDH5-201ENST00000341529 AMHR2Q16671 573 aa12.69□□□□□ -0.38
CDH5-201ENST00000341529 TMEM119Q4V9L6 283 aa12.69□□□□□ -0.38
CDH5-201ENST00000341529 MDH1BQ5I0G3 518 aa12.69□□□□□ -0.38
CDH5-201ENST00000341529 DACT2Q5SW24 774 aa12.69□□□□□ -0.38
CDH5-201ENST00000341529 KDELC2Q7Z4H8 507 aa12.69□□□□□ -0.38
CDH5-201ENST00000341529 SNF8Q96H20 258 aa12.69□□□□□ -0.38
CDH5-201ENST00000341529 MOV10L1Q9BXT6 1211 aaKnown RBP12.69□□□□□ -0.38
CDH5-201ENST00000341529 PPARGC1AQ9UBK2 798 aaKnown RBP12.69□□□□□ -0.38
CDH5-201ENST00000341529 TMX2Q9Y320 296 aa12.69□□□□□ -0.38
CDH5-201ENST00000341529 SNX9Q9Y5X1 595 aa12.69□□□□□ -0.38
CDH5-201ENST00000341529 ANKRD26Q9UPS8 1709 aa12.68□□□□□ -0.38
CDH5-201ENST00000341529 MED7O43513 233 aa12.68□□□□□ -0.38
CDH5-201ENST00000341529 CRCPO75575 148 aa12.68□□□□□ -0.38
CDH5-201ENST00000341529 MRPS9P82933 396 aaKnown RBP12.68□□□□□ -0.38
CDH5-201ENST00000341529 GPAT2Q6NUI2 795 aa12.68□□□□□ -0.38
CDH5-201ENST00000341529 PPP4R1Q8TF05 950 aa12.68□□□□□ -0.38
CDH5-201ENST00000341529 RBM41Q96IZ5 413 aaKnown RBP12.68□□□□□ -0.38
CDH5-201ENST00000341529 ZBTB45Q96K62 511 aaPredicted RBP12.68□□□□□ -0.38
CDH5-201ENST00000341529 AGAP3Q96P47 875 aa12.68□□□□□ -0.38
CDH5-201ENST00000341529 MRPL4Q9BYD3 311 aaKnown RBP12.68□□□□□ -0.38
CDH5-201ENST00000341529 RAB21Q9UL25 225 aa12.68□□□□□ -0.38
CDH5-201ENST00000341529 TMEM120BA0PK00 339 aa12.68□□□□□ -0.38
CDH5-201ENST00000341529 IREB2P48200 963 aaKnown RBP12.68□□□□□ -0.38
CDH5-201ENST00000341529 SPARCL1Q14515 664 aa12.68□□□□□ -0.38
CDH5-201ENST00000341529 MEI1Q5TIA1 1274 aa12.68□□□□□ -0.38
CDH5-201ENST00000341529 ATP8B4Q8TF62 1192 aa12.68□□□□□ -0.38
CDH5-201ENST00000341529 SUCLA2Q9P2R7 463 aaPredicted RBP12.68□□□□□ -0.38
CDH5-201ENST00000341529 DISP2A7MBM2 1401 aa12.68□□□□□ -0.38
CDH5-201ENST00000341529 MED1Q15648 1581 aaPredicted RBP12.68□□□□□ -0.38
CDH5-201ENST00000341529 NKRFO15226 690 aaKnown RBP eCLIP12.68□□□□□ -0.38
CDH5-201ENST00000341529 NCF2P19878 526 aaPredicted RBP12.68□□□□□ -0.38
CDH5-201ENST00000341529 RARRES1P49788 294 aa12.68□□□□□ -0.38
CDH5-201ENST00000341529 BCAR1P56945 870 aa12.68□□□□□ -0.38
CDH5-201ENST00000341529 DHX34Q14147 1143 aaKnown RBP12.68□□□□□ -0.38
CDH5-201ENST00000341529 GLRA4Q5JXX5 417 aa12.68□□□□□ -0.38
CDH5-201ENST00000341529 SLC13A5Q86YT5 568 aaPredicted RBP12.68□□□□□ -0.38
CDH5-201ENST00000341529 EMC1Q8N766 993 aa12.68□□□□□ -0.38
CDH5-201ENST00000341529 ATL2Q8NHH9 583 aa12.68□□□□□ -0.38
CDH5-201ENST00000341529 IL31RAQ8NI17 732 aa12.68□□□□□ -0.38
CDH5-201ENST00000341529 SYTL5Q8TDW5 730 aaPredicted RBP12.68□□□□□ -0.38
CDH5-201ENST00000341529 KIF12Q96FN5 646 aa12.68□□□□□ -0.38
CDH5-201ENST00000341529 SSX2IPQ9Y2D8 614 aa12.68□□□□□ -0.38
CDH5-201ENST00000341529 CFAP69A5D8W1 941 aa12.67□□□□□ -0.38
CDH5-201ENST00000341529 APRTP07741 180 aa12.67□□□□□ -0.38
CDH5-201ENST00000341529 TM4SF1P30408 202 aa12.67□□□□□ -0.38
CDH5-201ENST00000341529 SERPINB6P35237 376 aa12.67□□□□□ -0.38
CDH5-201ENST00000341529 CLCN3P51790 818 aa12.67□□□□□ -0.38
CDH5-201ENST00000341529 ARL4CP56559 192 aa12.67□□□□□ -0.38
CDH5-201ENST00000341529 NLRP11P59045 1033 aaKnown RBP12.67□□□□□ -0.38
CDH5-201ENST00000341529 NME3Q13232 169 aa12.67□□□□□ -0.38
CDH5-201ENST00000341529 N4BP2L2Q92802 583 aaPredicted RBP12.67□□□□□ -0.38
CDH5-201ENST00000341529 SLC5A5Q92911 643 aa12.67□□□□□ -0.38
CDH5-201ENST00000341529 XPO6Q96QU8 1125 aaKnown RBP12.67□□□□□ -0.38
CDH5-201ENST00000341529 SALL4Q9UJQ4 1053 aa12.67□□□□□ -0.38
CDH5-201ENST00000341529 CFLARO15519 480 aa12.67□□□□□ -0.38
CDH5-201ENST00000341529 CYP11B1P15538 503 aa12.67□□□□□ -0.38
CDH5-201ENST00000341529 MARCKSL1P49006 195 aa12.67□□□□□ -0.38
CDH5-201ENST00000341529 MUM1L1Q5H9M0 696 aa12.67□□□□□ -0.38
CDH5-201ENST00000341529 ICE2Q659A1 982 aa12.67□□□□□ -0.38
CDH5-201ENST00000341529 TWF2Q6IBS0 349 aaKnown RBP12.67□□□□□ -0.38
CDH5-201ENST00000341529 RWDD4Q6NW29 188 aaKnown RBP12.67□□□□□ -0.38
CDH5-201ENST00000341529 MKNK1Q9BUB5 465 aa12.67□□□□□ -0.38
CDH5-201ENST00000341529 MTMR12Q9C0I1 747 aa12.67□□□□□ -0.38
CDH5-201ENST00000341529 KIAA1586Q9HCI6 787 aa12.67□□□□□ -0.38
CDH5-201ENST00000341529 CHMP2BQ9UQN3 213 aa12.67□□□□□ -0.38
CDH5-201ENST00000341529 MON2Q7Z3U7 1717 aa12.67□□□□□ -0.38
CDH5-201ENST00000341529 PFASO15067 1338 aa12.67□□□□□ -0.38
CDH5-201ENST00000341529 EIF3DO15371 548 aaKnown RBP eCLIP12.67□□□□□ -0.38
CDH5-201ENST00000341529 CST8O60676 142 aa12.67□□□□□ -0.38
CDH5-201ENST00000341529 ICAM1P05362 532 aa12.67□□□□□ -0.38
CDH5-201ENST00000341529 LCP1P13796 627 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms