RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 TNFAIP2Q03169 654 aa16.19■□□□□ 0.18
BRAT1-201ENST00000340611 OR6J1Q8NGC5 347 aa16.19■□□□□ 0.18
BRAT1-201ENST00000340611 PAPOLBQ9NRJ5 636 aaKnown RBP16.19■□□□□ 0.18
BRAT1-201ENST00000340611 TYW1Q9NV66 732 aaKnown RBP16.19■□□□□ 0.18
BRAT1-201ENST00000340611 TSKSQ9UJT2 592 aa16.19■□□□□ 0.18
BRAT1-201ENST00000340611 PCDHGC5Q9Y5F6 944 aa16.19■□□□□ 0.18
BRAT1-201ENST00000340611 LRRIQ4A6NIV6 560 aa16.18■□□□□ 0.18
BRAT1-201ENST00000340611 AKR1B10O60218 316 aa16.18■□□□□ 0.18
BRAT1-201ENST00000340611 NEFHP12036 1026 aa16.18■□□□□ 0.18
BRAT1-201ENST00000340611 PPP1R2P41236 205 aa16.18■□□□□ 0.18
BRAT1-201ENST00000340611 KIF11P52732 1056 aa16.18■□□□□ 0.18
BRAT1-201ENST00000340611 DMP1Q13316 513 aaPredicted RBP16.18■□□□□ 0.18
BRAT1-201ENST00000340611 ANKRD20A8PQ5CZ79 823 aa16.18■□□□□ 0.18
BRAT1-201ENST00000340611 DCAF17Q5H9S7 520 aaPredicted RBP16.18■□□□□ 0.18
BRAT1-201ENST00000340611 METTL13Q8N6R0 699 aa16.18■□□□□ 0.18
BRAT1-201ENST00000340611 TMEM161BQ8NDZ6 487 aa16.18■□□□□ 0.18
BRAT1-201ENST00000340611 CYFIP2Q96F07 1278 aa16.18■□□□□ 0.18
BRAT1-201ENST00000340611 ZNF570Q96NI8 536 aa16.18■□□□□ 0.18
BRAT1-201ENST00000340611 HYOU1Q9Y4L1 999 aa16.18■□□□□ 0.18
BRAT1-201ENST00000340611 MGAMO43451 1857 aa16.18■□□□□ 0.18
BRAT1-201ENST00000340611 GLI1P08151 1106 aa16.18■□□□□ 0.18
BRAT1-201ENST00000340611 FLT3LGP49771 235 aa16.18■□□□□ 0.18
BRAT1-201ENST00000340611 CLCN3P51790 818 aa16.18■□□□□ 0.18
BRAT1-201ENST00000340611 RNASE9P60153 205 aaKnown RBP16.18■□□□□ 0.18
BRAT1-201ENST00000340611 PRKCZQ05513 592 aa16.18■□□□□ 0.18
BRAT1-201ENST00000340611 NOGQ13253 232 aa16.18■□□□□ 0.18
BRAT1-201ENST00000340611 MKRN4PQ13434 485 aaPredicted RBP16.18■□□□□ 0.18
BRAT1-201ENST00000340611 KCTD19Q17RG1 926 aaPredicted RBP16.18■□□□□ 0.18
BRAT1-201ENST00000340611 TCERG1LQ5VWI1 586 aa16.18■□□□□ 0.18
BRAT1-201ENST00000340611 EMBQ6PCB8 327 aa16.18■□□□□ 0.18
BRAT1-201ENST00000340611 SLC7A3Q8WY07 619 aa16.18■□□□□ 0.18
BRAT1-201ENST00000340611 USP6NLQ92738 828 aa16.18■□□□□ 0.18
BRAT1-201ENST00000340611 AGPAT3Q9NRZ7 376 aa16.18■□□□□ 0.18
BRAT1-201ENST00000340611 ZNF232Q9UNY5 417 aa16.18■□□□□ 0.18
BRAT1-201ENST00000340611 TTLL13PA6NNM8 815 aa16.18■□□□□ 0.18
BRAT1-201ENST00000340611 EDN1P05305 212 aa16.18■□□□□ 0.18
BRAT1-201ENST00000340611 LINGO3P0C6S8 592 aa16.18■□□□□ 0.18
BRAT1-201ENST00000340611 SRGAP2CP0DJJ0 459 aa16.18■□□□□ 0.18
BRAT1-201ENST00000340611 GLRA2P23416 452 aa16.18■□□□□ 0.18
BRAT1-201ENST00000340611 TARBP2Q15633 366 aaKnown RBP16.18■□□□□ 0.18
BRAT1-201ENST00000340611 BMT2Q1RMZ1 405 aa16.18■□□□□ 0.18
BRAT1-201ENST00000340611 ZNF467Q7Z7K2 595 aaPredicted RBP16.18■□□□□ 0.18
BRAT1-201ENST00000340611 TSC22D3Q99576 134 aa16.18■□□□□ 0.18
BRAT1-201ENST00000340611 STRA6Q9BX79 667 aa16.18■□□□□ 0.18
BRAT1-201ENST00000340611 NDST4Q9H3R1 872 aa16.18■□□□□ 0.18
BRAT1-201ENST00000340611 DHX33Q9H6R0 707 aaKnown RBP16.18■□□□□ 0.18
BRAT1-201ENST00000340611 HOMER3Q9NSC5 361 aa16.18■□□□□ 0.18
BRAT1-201ENST00000340611 NRBP2Q9NSY0 501 aa16.18■□□□□ 0.18
BRAT1-201ENST00000340611 TRAF3IP3Q9Y228 551 aa16.18■□□□□ 0.18
BRAT1-201ENST00000340611 C15orf41Q9Y2V0 281 aa16.18■□□□□ 0.18
BRAT1-201ENST00000340611 PDXKO00764 312 aa16.17■□□□□ 0.18
BRAT1-201ENST00000340611 CETN3O15182 167 aa16.17■□□□□ 0.18
BRAT1-201ENST00000340611 DKC1O60832 514 aaKnown RBP eCLIP16.17■□□□□ 0.18
BRAT1-201ENST00000340611 ZNF865P0CJ78 1059 aaPredicted RBP16.17■□□□□ 0.18
BRAT1-201ENST00000340611 ELNP15502 786 aa16.17■□□□□ 0.18
BRAT1-201ENST00000340611 PAFAH1B1P43034 410 aa16.17■□□□□ 0.18
BRAT1-201ENST00000340611 LACTBP83111 547 aaPredicted RBP16.17■□□□□ 0.18
BRAT1-201ENST00000340611 QPCTQ16769 361 aa16.17■□□□□ 0.18
BRAT1-201ENST00000340611 DUSP28Q4G0W2 176 aa16.17■□□□□ 0.18
BRAT1-201ENST00000340611 CFAP58Q5T655 872 aa16.17■□□□□ 0.18
BRAT1-201ENST00000340611 ALS2CLQ60I27 953 aa16.17■□□□□ 0.18
BRAT1-201ENST00000340611 TAS1R3Q7RTX0 852 aa16.17■□□□□ 0.18
BRAT1-201ENST00000340611 ACTR5Q9H9F9 607 aaPredicted RBP16.17■□□□□ 0.18
BRAT1-201ENST00000340611 PIDD1Q9HB75 910 aa16.17■□□□□ 0.18
BRAT1-201ENST00000340611 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.17■□□□□ 0.181e-6■■■■■ 224.2
BRAT1-201ENST00000340611 SEL1LQ9UBV2 794 aa16.17■□□□□ 0.18
BRAT1-201ENST00000340611 KAT6AQ92794 2004 aa16.17■□□□□ 0.18
BRAT1-201ENST00000340611 ZNF233A6NK53 670 aa16.17■□□□□ 0.18
BRAT1-201ENST00000340611 VEGFBP49765 207 aa16.17■□□□□ 0.18
BRAT1-201ENST00000340611 ELF3P78545 371 aaPredicted RBP16.17■□□□□ 0.18
BRAT1-201ENST00000340611 LAMC2Q13753 1193 aa16.17■□□□□ 0.18
BRAT1-201ENST00000340611 TRADDQ15628 312 aa16.17■□□□□ 0.18
BRAT1-201ENST00000340611 VWA3BQ502W6 1294 aa16.17■□□□□ 0.18
BRAT1-201ENST00000340611 PRPF31Q8WWY3 499 aaKnown RBP16.17■□□□□ 0.18
BRAT1-201ENST00000340611 TRIB2Q92519 343 aa16.17■□□□□ 0.18
BRAT1-201ENST00000340611 NIFKQ9BYG3 293 aaKnown RBP16.17■□□□□ 0.18
BRAT1-201ENST00000340611 EPB41L5Q9HCM4 733 aa16.17■□□□□ 0.18
BRAT1-201ENST00000340611 MYH10P35580 1976 aa16.16■□□□□ 0.18
BRAT1-201ENST00000340611 EIF3DO15371 548 aaKnown RBP eCLIP16.16■□□□□ 0.18
BRAT1-201ENST00000340611 CALUO43852 315 aaPredicted RBP16.16■□□□□ 0.18
BRAT1-201ENST00000340611 PPFIA2O75334 1257 aa16.16■□□□□ 0.18
BRAT1-201ENST00000340611 EPB41P11171 864 aaKnown RBP16.16■□□□□ 0.18
BRAT1-201ENST00000340611 INSRRP14616 1297 aa16.16■□□□□ 0.18
BRAT1-201ENST00000340611 TCP1P17987 556 aaKnown RBP16.16■□□□□ 0.18
BRAT1-201ENST00000340611 NR1D1P20393 614 aa16.16■□□□□ 0.18
BRAT1-201ENST00000340611 CNGA1P29973 690 aa16.16■□□□□ 0.18
BRAT1-201ENST00000340611 APLP1P51693 650 aa16.16■□□□□ 0.18
BRAT1-201ENST00000340611 GUCY2DQ02846 1103 aa16.16■□□□□ 0.18
BRAT1-201ENST00000340611 MYLK4Q86YV6 388 aaPredicted RBP16.16■□□□□ 0.18
BRAT1-201ENST00000340611 FAM114A1Q8IWE2 563 aa16.16■□□□□ 0.18
BRAT1-201ENST00000340611 RETREG2Q8NC44 543 aa16.16■□□□□ 0.18
BRAT1-201ENST00000340611 TRPV1Q8NER1 839 aa16.16■□□□□ 0.18
BRAT1-201ENST00000340611 ATP8B4Q8TF62 1192 aa16.16■□□□□ 0.18
BRAT1-201ENST00000340611 C16orf70Q9BSU1 422 aa16.16■□□□□ 0.18
BRAT1-201ENST00000340611 TRIM49P0CI25 452 aa16.16■□□□□ 0.18
BRAT1-201ENST00000340611 TRIM49CP0CI26 452 aa16.16■□□□□ 0.18
BRAT1-201ENST00000340611 RGS2P41220 211 aa16.16■□□□□ 0.18
BRAT1-201ENST00000340611 MAGEA1P43355 309 aa16.16■□□□□ 0.18
BRAT1-201ENST00000340611 NCKAP1LP55160 1127 aa16.16■□□□□ 0.18
BRAT1-201ENST00000340611 CWF19L1Q69YN2 538 aaKnown RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms