RNA–Protein interactions for RNA: ENST00000339486.7

RIOK3-201, Transcript of RIO kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RIOK3, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-201ENST00000339486 C6orf89Q6UWU4 347 aa13.21□□□□□ -0.3
RIOK3-201ENST00000339486 TRIM42Q8IWZ5 723 aa13.21□□□□□ -0.3
RIOK3-201ENST00000339486 PPM1NQ8N819 430 aa13.21□□□□□ -0.3
RIOK3-201ENST00000339486 PI4K2AQ9BTU6 479 aa13.21□□□□□ -0.3
RIOK3-201ENST00000339486 TSSK1BQ9BXA7 367 aa13.21□□□□□ -0.3
RIOK3-201ENST00000339486 IFT122Q9HBG6 1241 aa13.21□□□□□ -0.3
RIOK3-201ENST00000339486 ACP6Q9NPH0 428 aa13.21□□□□□ -0.3
RIOK3-201ENST00000339486 PAPOLBQ9NRJ5 636 aaKnown RBP13.21□□□□□ -0.3
RIOK3-201ENST00000339486 NDE1Q9NXR1 346 aa13.21□□□□□ -0.3
RIOK3-201ENST00000339486 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.21□□□□□ -0.3
RIOK3-201ENST00000339486 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.2□□□□□ -0.3
RIOK3-201ENST00000339486 PPEF1O14829 653 aaPredicted RBP13.2□□□□□ -0.3
RIOK3-201ENST00000339486 POLGP54098 1239 aaPredicted RBP13.2□□□□□ -0.3
RIOK3-201ENST00000339486 RRP1BQ14684 758 aaKnown RBP13.2□□□□□ -0.3
RIOK3-201ENST00000339486 ARHGEF16Q5VV41 709 aa13.2□□□□□ -0.3
RIOK3-201ENST00000339486 C11orf63Q6NUN7 778 aa13.2□□□□□ -0.3
RIOK3-201ENST00000339486 DARS2Q6PI48 645 aaKnown RBP13.2□□□□□ -0.3
RIOK3-201ENST00000339486 SLC47A2Q86VL8 602 aa13.2□□□□□ -0.3
RIOK3-201ENST00000339486 RASGEF1CQ8N431 466 aa13.2□□□□□ -0.3
RIOK3-201ENST00000339486 ZNF384Q8TF68 577 aa13.2□□□□□ -0.3
RIOK3-201ENST00000339486 CENPKQ9BS16 269 aa13.2□□□□□ -0.3
RIOK3-201ENST00000339486 DNAJC18Q9H819 358 aa13.2□□□□□ -0.3
RIOK3-201ENST00000339486 IRAK4Q9NWZ3 460 aa13.2□□□□□ -0.3
RIOK3-201ENST00000339486 CLRN2A0PK11 232 aa13.2□□□□□ -0.3
RIOK3-201ENST00000339486 SLC26A4O43511 780 aa13.2□□□□□ -0.3
RIOK3-201ENST00000339486 ENO1P06733 434 aaKnown RBP13.2□□□□□ -0.3
RIOK3-201ENST00000339486 KRT4P19013 534 aa13.2□□□□□ -0.3
RIOK3-201ENST00000339486 VHLP40337 213 aa13.2□□□□□ -0.3
RIOK3-201ENST00000339486 KRT81Q14533 505 aa13.2□□□□□ -0.3
RIOK3-201ENST00000339486 KLHL38Q2WGJ6 581 aa13.2□□□□□ -0.3
RIOK3-201ENST00000339486 SYCP2LQ5T4T6 812 aa13.2□□□□□ -0.3
RIOK3-201ENST00000339486 MTDHQ86UE4 582 aaKnown RBP13.2□□□□□ -0.3
RIOK3-201ENST00000339486 LINC00116Q8NCU8 138 aa13.2□□□□□ -0.3
RIOK3-201ENST00000339486 CKAP2Q8WWK9 683 aa13.2□□□□□ -0.3
RIOK3-201ENST00000339486 ELMO3Q96BJ8 720 aa13.2□□□□□ -0.3
RIOK3-201ENST00000339486 SLC13A1Q9BZW2 595 aa13.2□□□□□ -0.3
RIOK3-201ENST00000339486 COA1Q9GZY4 146 aa13.2□□□□□ -0.3
RIOK3-201ENST00000339486 MYLK2Q9H1R3 596 aa13.2□□□□□ -0.3
RIOK3-201ENST00000339486 SEPT9Q9UHD8 586 aaPredicted RBP13.2□□□□□ -0.3
RIOK3-201ENST00000339486 KDM3BQ7LBC6 1761 aa13.2□□□□□ -0.3
RIOK3-201ENST00000339486 ZBTB39O15060 712 aa13.2□□□□□ -0.3
RIOK3-201ENST00000339486 P4HBP07237 508 aaKnown RBP13.2□□□□□ -0.3
RIOK3-201ENST00000339486 SLC1A1P43005 524 aa13.2□□□□□ -0.3
RIOK3-201ENST00000339486 RANBP1P43487 201 aa13.2□□□□□ -0.3
RIOK3-201ENST00000339486 DRG2P55039 364 aaKnown RBP13.2□□□□□ -0.3
RIOK3-201ENST00000339486 TAF1BQ53T94 588 aaPredicted RBP13.2□□□□□ -0.3
RIOK3-201ENST00000339486 ZNF720Q7Z2F6 126 aa13.2□□□□□ -0.3
RIOK3-201ENST00000339486 MAGEC3Q8TD91 643 aa13.2□□□□□ -0.3
RIOK3-201ENST00000339486 TLCD1Q96CP7 247 aa13.2□□□□□ -0.3
RIOK3-201ENST00000339486 POLR3CQ9BUI4 534 aaPredicted RBP13.2□□□□□ -0.3
RIOK3-201ENST00000339486 CHST7Q9NS84 486 aa13.2□□□□□ -0.3
RIOK3-201ENST00000339486 PSMC3IPQ9P2W1 217 aaPredicted RBP13.2□□□□□ -0.3
RIOK3-201ENST00000339486 FOXO6A8MYZ6 492 aa13.19□□□□□ -0.3
RIOK3-201ENST00000339486 CRKP46108 304 aa13.19□□□□□ -0.3
RIOK3-201ENST00000339486 QARSP47897 775 aaKnown RBP13.19□□□□□ -0.3
RIOK3-201ENST00000339486 NOP14P78316 857 aaKnown RBP13.19□□□□□ -0.3
RIOK3-201ENST00000339486 SNRNP35Q16560 246 aaKnown RBP13.19□□□□□ -0.3
RIOK3-201ENST00000339486 CRLF3Q8IUI8 442 aa13.19□□□□□ -0.3
RIOK3-201ENST00000339486 CCDC124Q96CT7 223 aaKnown RBP13.19□□□□□ -0.3
RIOK3-201ENST00000339486 PWWP2AQ96N64 755 aa13.19□□□□□ -0.3
RIOK3-201ENST00000339486 DCLRE1BQ9H816 532 aa13.19□□□□□ -0.3
RIOK3-201ENST00000339486 HEY2Q9UBP5 337 aa13.19□□□□□ -0.3
RIOK3-201ENST00000339486 MARCOQ9UEW3 520 aaPredicted RBP13.19□□□□□ -0.3
RIOK3-201ENST00000339486 KCTD6Q8NC69 237 aa13.19□□□□□ -0.3
RIOK3-201ENST00000339486 KAT5Q92993 513 aa13.19□□□□□ -0.3
RIOK3-201ENST00000339486 NINJ2Q9NZG7 142 aa13.19□□□□□ -0.3
RIOK3-201ENST00000339486 B2RBV5 119 aa13.19□□□□□ -0.3
RIOK3-201ENST00000339486 KRT37O76014 449 aa13.19□□□□□ -0.3
RIOK3-201ENST00000339486 GZMAP12544 262 aa13.19□□□□□ -0.3
RIOK3-201ENST00000339486 CALB2P22676 271 aa13.19□□□□□ -0.3
RIOK3-201ENST00000339486 GNA15P30679 374 aa13.19□□□□□ -0.3
RIOK3-201ENST00000339486 PDE1BQ01064 536 aa13.19□□□□□ -0.3
RIOK3-201ENST00000339486 OLFML3Q9NRN5 406 aa13.19□□□□□ -0.3
RIOK3-201ENST00000339486 C5orf60A6NFR6 353 aa13.18□□□□□ -0.3
RIOK3-201ENST00000339486 PAEPP09466 180 aa13.18□□□□□ -0.3
RIOK3-201ENST00000339486 CYP11B1P15538 503 aa13.18□□□□□ -0.3
RIOK3-201ENST00000339486 THOC5Q13769 683 aaKnown RBP13.18□□□□□ -0.3
RIOK3-201ENST00000339486 ARSHQ5FYA8 562 aa13.18□□□□□ -0.3
RIOK3-201ENST00000339486 ATG16L1Q676U5 607 aa13.18□□□□□ -0.3
RIOK3-201ENST00000339486 ARHGEF19Q8IW93 802 aa13.18□□□□□ -0.3
RIOK3-201ENST00000339486 RNPEPL1Q9HAU8 725 aa13.18□□□□□ -0.3
RIOK3-201ENST00000339486 PCSK1NQ9UHG2 260 aa13.18□□□□□ -0.3
RIOK3-201ENST00000339486 G3BP2Q9UN86 482 aaKnown RBP13.18□□□□□ -0.3
RIOK3-201ENST00000339486 C21orf2O43822 256 aa13.18□□□□□ -0.3
RIOK3-201ENST00000339486 UNC5CO95185 931 aa13.18□□□□□ -0.3
RIOK3-201ENST00000339486 GH1P01241 217 aa13.18□□□□□ -0.3
RIOK3-201ENST00000339486 ZCCHC18P0CG32 403 aa13.18□□□□□ -0.3
RIOK3-201ENST00000339486 KRT10P13645 584 aa13.18□□□□□ -0.3
RIOK3-201ENST00000339486 NCF2P19878 526 aaPredicted RBP13.18□□□□□ -0.3
RIOK3-201ENST00000339486 RRM1P23921 792 aa13.18□□□□□ -0.3
RIOK3-201ENST00000339486 PSMA2P25787 234 aa13.18□□□□□ -0.3
RIOK3-201ENST00000339486 PAPOLAP51003 745 aaKnown RBP13.18□□□□□ -0.3
RIOK3-201ENST00000339486 SH3BGRP55822 239 aaPredicted RBP13.18□□□□□ -0.3
RIOK3-201ENST00000339486 MARSP56192 900 aaKnown RBP13.18□□□□□ -0.3
RIOK3-201ENST00000339486 AP2B1P63010 937 aa13.18□□□□□ -0.3
RIOK3-201ENST00000339486 SH2D4BQ5SQS7 431 aa13.18□□□□□ -0.3
RIOK3-201ENST00000339486 MAP3K21Q5TCX8 1036 aa13.18□□□□□ -0.3
RIOK3-201ENST00000339486 SCARA5Q6ZMJ2 495 aa13.18□□□□□ -0.3
RIOK3-201ENST00000339486 C3orf62Q6ZUJ4 267 aa13.18□□□□□ -0.3
RIOK3-201ENST00000339486 RIBC1Q8N443 379 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms