RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 VHLP40337 213 aa13.4□□□□□ -0.26
DFFB-202ENST00000339350 HALP42357 657 aa13.4□□□□□ -0.26
DFFB-202ENST00000339350 TUFMP49411 452 aaKnown RBP13.4□□□□□ -0.26
DFFB-202ENST00000339350 CERKLQ49MI3 558 aaPredicted RBP13.4□□□□□ -0.26
DFFB-202ENST00000339350 UBAP2Q5T6F2 1119 aaKnown RBP13.4□□□□□ -0.26
DFFB-202ENST00000339350 ENDOVQ8N8Q3 282 aaKnown RBP13.4□□□□□ -0.26
DFFB-202ENST00000339350 TBC1D16Q8TBP0 767 aa13.4□□□□□ -0.26
DFFB-202ENST00000339350 RSPH1Q8WYR4 309 aa13.4□□□□□ -0.26
DFFB-202ENST00000339350 SNX27Q96L92 541 aa13.4□□□□□ -0.26
DFFB-202ENST00000339350 EDEM3Q9BZQ6 932 aa13.4□□□□□ -0.26
DFFB-202ENST00000339350 DDX4Q9NQI0 724 aaKnown RBP13.4□□□□□ -0.26
DFFB-202ENST00000339350 FGFR1OP2Q9NVK5 253 aa13.4□□□□□ -0.26
DFFB-202ENST00000339350 RASAL2Q9UJF2 1139 aa13.4□□□□□ -0.26
DFFB-202ENST00000339350 ESYT2A0FGR8 921 aa13.39□□□□□ -0.27
DFFB-202ENST00000339350 PGRMC1O00264 195 aaKnown RBP13.39□□□□□ -0.27
DFFB-202ENST00000339350 USH1GQ495M9 461 aa13.39□□□□□ -0.27
DFFB-202ENST00000339350 SNX30Q5VWJ9 437 aa13.39□□□□□ -0.27
DFFB-202ENST00000339350 KLC3Q6P597 504 aa13.39□□□□□ -0.27
DFFB-202ENST00000339350 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.39□□□□□ -0.27
DFFB-202ENST00000339350 TPCN2Q8NHX9 752 aa13.39□□□□□ -0.27
DFFB-202ENST00000339350 LRRC8CQ8TDW0 803 aa13.39□□□□□ -0.27
DFFB-202ENST00000339350 CENPKQ9BS16 269 aa13.39□□□□□ -0.27
DFFB-202ENST00000339350 MIS12Q9H081 205 aa13.39□□□□□ -0.27
DFFB-202ENST00000339350 TMEM59LQ9UK28 342 aa13.39□□□□□ -0.27
DFFB-202ENST00000339350 TIMM22Q9Y584 194 aa13.39□□□□□ -0.27
DFFB-202ENST00000339350 MAST2Q6P0Q8 1798 aa13.39□□□□□ -0.27
DFFB-202ENST00000339350 PNMA6FA0A0J9YX94 578 aa13.39□□□□□ -0.27
DFFB-202ENST00000339350 FGGP02679 453 aa13.39□□□□□ -0.27
DFFB-202ENST00000339350 LYNP07948 512 aa13.39□□□□□ -0.27
DFFB-202ENST00000339350 PLCG2P16885 1265 aa13.39□□□□□ -0.27
DFFB-202ENST00000339350 HOXD13P35453 343 aa13.39□□□□□ -0.27
DFFB-202ENST00000339350 GEMIN4P57678 1058 aaKnown RBP13.39□□□□□ -0.27
DFFB-202ENST00000339350 LRRC57Q8N9N7 239 aa13.39□□□□□ -0.27
DFFB-202ENST00000339350 SCFD2Q8WU76 684 aa13.39□□□□□ -0.27
DFFB-202ENST00000339350 NAT14Q8WUY8 206 aa13.39□□□□□ -0.27
DFFB-202ENST00000339350 SYN2Q92777 582 aaPredicted RBP13.39□□□□□ -0.27
DFFB-202ENST00000339350 TLCD1Q96CP7 247 aa13.39□□□□□ -0.27
DFFB-202ENST00000339350 CEP63Q96MT8 703 aa13.39□□□□□ -0.27
DFFB-202ENST00000339350 REEP2Q9BRK0 252 aa13.39□□□□□ -0.27
DFFB-202ENST00000339350 LRRC27Q9C0I9 530 aa13.39□□□□□ -0.27
DFFB-202ENST00000339350 TUBA8Q9NY65 449 aaPredicted RBP13.39□□□□□ -0.27
DFFB-202ENST00000339350 GCNT4Q9P109 453 aa13.39□□□□□ -0.27
DFFB-202ENST00000339350 SBF2Q86WG5 1849 aa13.39□□□□□ -0.27
DFFB-202ENST00000339350 SUN1O94901 812 aa13.39□□□□□ -0.27
DFFB-202ENST00000339350 AFPP02771 609 aaKnown RBP13.39□□□□□ -0.27
DFFB-202ENST00000339350 XRCC5P13010 732 aaKnown RBP13.39□□□□□ -0.27
DFFB-202ENST00000339350 CATSPER3Q86XQ3 398 aa13.39□□□□□ -0.27
DFFB-202ENST00000339350 GLYCTKQ8IVS8 523 aa13.39□□□□□ -0.27
DFFB-202ENST00000339350 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.39□□□□□ -0.27
DFFB-202ENST00000339350 GLG1Q92896 1179 aa13.39□□□□□ -0.27
DFFB-202ENST00000339350 TUBGCP5Q96RT8 1024 aa13.39□□□□□ -0.27
DFFB-202ENST00000339350 DBNDD1Q9H9R9 158 aa13.39□□□□□ -0.27
DFFB-202ENST00000339350 SEL1LQ9UBV2 794 aa13.39□□□□□ -0.27
DFFB-202ENST00000339350 SPDYE16A6NNV3 312 aaPredicted RBP13.38□□□□□ -0.27
DFFB-202ENST00000339350 PEX14O75381 377 aa13.38□□□□□ -0.27
DFFB-202ENST00000339350 GCNT3O95395 438 aa13.38□□□□□ -0.27
DFFB-202ENST00000339350 ASMTLO95671 621 aa13.38□□□□□ -0.27
DFFB-202ENST00000339350 ZNF543Q08ER8 600 aa13.38□□□□□ -0.27
DFFB-202ENST00000339350 TCP10Q12799 353 aa13.38□□□□□ -0.27
DFFB-202ENST00000339350 C6orf183Q5T699 404 aa13.38□□□□□ -0.27
DFFB-202ENST00000339350 NRG4Q8WWG1 115 aa13.38□□□□□ -0.27
DFFB-202ENST00000339350 P2RX7Q99572 595 aaKnown RBP13.38□□□□□ -0.27
DFFB-202ENST00000339350 DHX36Q9H2U1 1008 aaKnown RBP13.38□□□□□ -0.27
DFFB-202ENST00000339350 ADAM7Q9H2U9 754 aa13.38□□□□□ -0.27
DFFB-202ENST00000339350 IGSF9BQ9UPX0 1349 aa13.38□□□□□ -0.27
DFFB-202ENST00000339350 TMEM110-MUSTN1A8MSY1 372 aa13.38□□□□□ -0.27
DFFB-202ENST00000339350 DDX3XO00571 662 aaKnown RBP eCLIP13.38□□□□□ -0.27
DFFB-202ENST00000339350 UNC5CO95185 931 aa13.38□□□□□ -0.27
DFFB-202ENST00000339350 OAS1P00973 400 aaKnown RBP13.38□□□□□ -0.27
DFFB-202ENST00000339350 TRIM67Q6ZTA4 783 aa13.38□□□□□ -0.27
DFFB-202ENST00000339350 TREML1Q86YW5 311 aa13.38□□□□□ -0.27
DFFB-202ENST00000339350 RXFP1Q9HBX9 757 aa13.38□□□□□ -0.27
DFFB-202ENST00000339350 AASDHPPTQ9NRN7 309 aa13.38□□□□□ -0.27
DFFB-202ENST00000339350 STOML1Q9UBI4 398 aa13.38□□□□□ -0.27
DFFB-202ENST00000339350 ARFGEF1Q9Y6D6 1849 aa13.38□□□□□ -0.27
DFFB-202ENST00000339350 ZBTB39O15060 712 aa13.37□□□□□ -0.27
DFFB-202ENST00000339350 POTEJP0CG39 1038 aa13.37□□□□□ -0.27
DFFB-202ENST00000339350 CCNB1P14635 433 aa13.37□□□□□ -0.27
DFFB-202ENST00000339350 GALCP54803 685 aa13.37□□□□□ -0.27
DFFB-202ENST00000339350 ASPRV1Q53RT3 343 aa13.37□□□□□ -0.27
DFFB-202ENST00000339350 LRRC43Q8N309 656 aa13.37□□□□□ -0.27
DFFB-202ENST00000339350 ZNF713Q8N859 430 aaPredicted RBP13.37□□□□□ -0.27
DFFB-202ENST00000339350 RDH13Q8NBN7 331 aa13.37□□□□□ -0.27
DFFB-202ENST00000339350 CYP2W1Q8TAV3 490 aa13.37□□□□□ -0.27
DFFB-202ENST00000339350 NT5C3AQ9H0P0 336 aa13.37□□□□□ -0.27
DFFB-202ENST00000339350 ERVK-5Q9HDB9 667 aa13.37□□□□□ -0.27
DFFB-202ENST00000339350 CLIC5Q9NZA1 410 aa13.37□□□□□ -0.27
DFFB-202ENST00000339350 HESX1Q9UBX0 185 aa13.37□□□□□ -0.27
DFFB-202ENST00000339350 TRPC5Q9UL62 973 aaPredicted RBP13.37□□□□□ -0.27
DFFB-202ENST00000339350 PPP1R9AQ9ULJ8 1098 aa13.37□□□□□ -0.27
DFFB-202ENST00000339350 PCDHA1Q9Y5I3 950 aa13.37□□□□□ -0.27
DFFB-202ENST00000339350 STK10O94804 968 aaKnown RBP13.37□□□□□ -0.27
DFFB-202ENST00000339350 H2AFZP0C0S5 128 aa13.37□□□□□ -0.27
DFFB-202ENST00000339350 PORP16435 677 aaPredicted RBP13.37□□□□□ -0.27
DFFB-202ENST00000339350 CCR3P51677 355 aa13.37□□□□□ -0.27
DFFB-202ENST00000339350 SLC12A3P55017 1021 aa13.37□□□□□ -0.27
DFFB-202ENST00000339350 GIT2Q14161 759 aa13.37□□□□□ -0.27
DFFB-202ENST00000339350 COG2Q14746 738 aa13.37□□□□□ -0.27
DFFB-202ENST00000339350 DPY19L2P1Q6NXN4 242 aa13.37□□□□□ -0.27
DFFB-202ENST00000339350 CAPN12Q6ZSI9 719 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms