RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 SPATC1LQ9H0A9 340 aa9.48□□□□□ -0.89
SNCA-201ENST00000336904 PPANQ9NQ55 473 aaKnown RBP9.48□□□□□ -0.89
SNCA-201ENST00000336904 PDLIM7Q9NR12 457 aa9.48□□□□□ -0.89
SNCA-201ENST00000336904 CHST7Q9NS84 486 aa9.48□□□□□ -0.89
SNCA-201ENST00000336904 RGPD3A6NKT7 1758 aaPredicted RBP9.48□□□□□ -0.89
SNCA-201ENST00000336904 RGPD4Q7Z3J3 1758 aa9.48□□□□□ -0.89
SNCA-201ENST00000336904 PAPPA2Q9BXP8 1791 aa9.48□□□□□ -0.89
SNCA-201ENST00000336904 MYO1FO00160 1098 aa9.48□□□□□ -0.89
SNCA-201ENST00000336904 THAP12O43422 761 aa9.48□□□□□ -0.89
SNCA-201ENST00000336904 RARAP10276 462 aa9.48□□□□□ -0.89
SNCA-201ENST00000336904 MAPK4P31152 587 aa9.48□□□□□ -0.89
SNCA-201ENST00000336904 RPL21P46778 160 aaKnown RBP9.48□□□□□ -0.89
SNCA-201ENST00000336904 ZNF844Q08AG5 666 aa9.48□□□□□ -0.89
SNCA-201ENST00000336904 ALCAMQ13740 583 aa9.48□□□□□ -0.89
SNCA-201ENST00000336904 CCDC137Q6PK04 289 aaKnown RBP9.48□□□□□ -0.89
SNCA-201ENST00000336904 ANKS1BQ7Z6G8 1248 aa9.48□□□□□ -0.89
SNCA-201ENST00000336904 ASCC2Q9H1I8 757 aaPredicted RBP9.48□□□□□ -0.89
SNCA-201ENST00000336904 C10orf88Q9H8K7 445 aa9.48□□□□□ -0.89
SNCA-201ENST00000336904 CALCOCO1Q9P1Z2 691 aa9.48□□□□□ -0.89
SNCA-201ENST00000336904 NXF1Q9UBU9 619 aaKnown RBP9.48□□□□□ -0.89
SNCA-201ENST00000336904 TJP2Q9UDY2 1190 aa9.48□□□□□ -0.89
SNCA-201ENST00000336904 ADAMTS5Q9UNA0 930 aa9.48□□□□□ -0.89
SNCA-201ENST00000336904 NOVA2Q9UNW9 492 aaKnown RBP9.48□□□□□ -0.89
SNCA-201ENST00000336904 R3HDM2Q9Y2K5 976 aaKnown RBP9.48□□□□□ -0.89
SNCA-201ENST00000336904 DAAM1Q9Y4D1 1078 aa9.48□□□□□ -0.89
SNCA-201ENST00000336904 GRIN2DO15399 1336 aa9.47□□□□□ -0.89
SNCA-201ENST00000336904 C19orf81C9J6K1 198 aa9.47□□□□□ -0.89
SNCA-201ENST00000336904 NOP56O00567 594 aaKnown RBP9.47□□□□□ -0.89
SNCA-201ENST00000336904 OPA1O60313 960 aa9.47□□□□□ -0.89
SNCA-201ENST00000336904 KRT19P08727 400 aa9.47□□□□□ -0.89
SNCA-201ENST00000336904 SCP2P22307 547 aa9.47□□□□□ -0.89
SNCA-201ENST00000336904 BRD2P25440 801 aaKnown RBP9.47□□□□□ -0.89
SNCA-201ENST00000336904 GPC3P51654 580 aa9.47□□□□□ -0.89
SNCA-201ENST00000336904 KRT71Q3SY84 523 aa9.47□□□□□ -0.89
SNCA-201ENST00000336904 CYP4A22Q5TCH4 519 aa9.47□□□□□ -0.89
SNCA-201ENST00000336904 C12orf56Q8IXR9 622 aa9.47□□□□□ -0.89
SNCA-201ENST00000336904 KCTD17Q8N5Z5 321 aa9.47□□□□□ -0.89
SNCA-201ENST00000336904 SAMD3Q8N6K7 520 aa9.47□□□□□ -0.89
SNCA-201ENST00000336904 RNF25Q96BH1 459 aaPredicted RBP9.47□□□□□ -0.89
SNCA-201ENST00000336904 IWS1Q96ST2 819 aa9.47□□□□□ -0.89
SNCA-201ENST00000336904 SH3GL2Q99962 352 aa9.47□□□□□ -0.89
SNCA-201ENST00000336904 SGIP1Q9BQI5 828 aa9.47□□□□□ -0.89
SNCA-201ENST00000336904 FHDC1Q9C0D6 1143 aaPredicted RBP9.47□□□□□ -0.89
SNCA-201ENST00000336904 EFCC1Q9HA90 598 aa9.47□□□□□ -0.89
SNCA-201ENST00000336904 BRCA1P38398 1863 aaKnown RBP9.47□□□□□ -0.89
SNCA-201ENST00000336904 INO80B-WBP1J3KQ70 363 aa9.47□□□□□ -0.89
SNCA-201ENST00000336904 NR1D1P20393 614 aa9.47□□□□□ -0.89
SNCA-201ENST00000336904 MYL6P60660 151 aa9.47□□□□□ -0.89
SNCA-201ENST00000336904 RPL7AP62424 266 aaKnown RBP9.47□□□□□ -0.89
SNCA-201ENST00000336904 IFFO1Q0D2I5 559 aa9.47□□□□□ -0.89
SNCA-201ENST00000336904 BRDTQ58F21 947 aaPredicted RBP9.47□□□□□ -0.89
SNCA-201ENST00000336904 WDR44Q5JSH3 913 aa9.47□□□□□ -0.89
SNCA-201ENST00000336904 SEL1L2Q5TEA6 688 aa9.47□□□□□ -0.89
SNCA-201ENST00000336904 LBX2Q6XYB7 198 aa9.47□□□□□ -0.89
SNCA-201ENST00000336904 TMC3Q7Z5M5 1100 aa9.47□□□□□ -0.89
SNCA-201ENST00000336904 RHOT2Q8IXI1 618 aa9.47□□□□□ -0.89
SNCA-201ENST00000336904 UBL4BQ8N7F7 174 aa9.47□□□□□ -0.89
SNCA-201ENST00000336904 CCDC26Q8TAB7 109 aa9.47□□□□□ -0.89
SNCA-201ENST00000336904 PSPC1Q8WXF1 523 aaKnown RBP9.47□□□□□ -0.89
SNCA-201ENST00000336904 DCPSQ96C86 337 aaKnown RBP9.47□□□□□ -0.89
SNCA-201ENST00000336904 CCDC114Q96M63 670 aa9.47□□□□□ -0.89
SNCA-201ENST00000336904 FMO2Q99518 471 aa9.47□□□□□ -0.89
SNCA-201ENST00000336904 INO80BQ9C086 356 aaPredicted RBP9.47□□□□□ -0.89
SNCA-201ENST00000336904 CCDC113Q9H0I3 377 aa9.47□□□□□ -0.89
SNCA-201ENST00000336904 PORCNQ9H237 461 aa9.47□□□□□ -0.89
SNCA-201ENST00000336904 INTUQ9ULD6 942 aa9.47□□□□□ -0.89
SNCA-201ENST00000336904 MROH7Q68CQ1 1323 aa9.47□□□□□ -0.89
SNCA-201ENST00000336904 LAMA3Q16787 3333 aa9.47□□□□□ -0.89
SNCA-201ENST00000336904 LAMA2P24043 3122 aaKnown RBP9.46□□□□□ -0.89
SNCA-201ENST00000336904 EXTL3O43909 919 aa9.46□□□□□ -0.89
SNCA-201ENST00000336904 POTEJP0CG39 1038 aa9.46□□□□□ -0.89
SNCA-201ENST00000336904 KRT10P13645 584 aa9.46□□□□□ -0.89
SNCA-201ENST00000336904 GNA15P30679 374 aa9.46□□□□□ -0.89
SNCA-201ENST00000336904 PEX5P50542 639 aa9.46□□□□□ -0.89
SNCA-201ENST00000336904 CDH8P55286 799 aa9.46□□□□□ -0.89
SNCA-201ENST00000336904 TAS2R40P59535 323 aa9.46□□□□□ -0.89
SNCA-201ENST00000336904 PTENP60484 403 aa9.46□□□□□ -0.89
SNCA-201ENST00000336904 NOP14P78316 857 aaKnown RBP9.46□□□□□ -0.89
SNCA-201ENST00000336904 POU5F1Q01860 360 aaKnown RBP9.46□□□□□ -0.89
SNCA-201ENST00000336904 ADCY2Q08462 1091 aa9.46□□□□□ -0.89
SNCA-201ENST00000336904 PPFIA1Q13136 1202 aa9.46□□□□□ -0.89
SNCA-201ENST00000336904 EEF1DP3Q658K8 133 aa9.46□□□□□ -0.89
SNCA-201ENST00000336904 CAPN12Q6ZSI9 719 aa9.46□□□□□ -0.89
SNCA-201ENST00000336904 SEMA4AQ9H3S1 761 aa9.46□□□□□ -0.89
SNCA-201ENST00000336904 ST6GALNAC4Q9H4F1 302 aa9.46□□□□□ -0.89
SNCA-201ENST00000336904 MINDY3Q9H8M7 445 aa9.46□□□□□ -0.89
SNCA-201ENST00000336904 RRP15Q9Y3B9 282 aaKnown RBP9.46□□□□□ -0.89
SNCA-201ENST00000336904 ARID2Q68CP9 1835 aa9.46□□□□□ -0.89
SNCA-201ENST00000336904 GOLGA6L10A0A0M3HER8 536 aa9.46□□□□□ -0.9
SNCA-201ENST00000336904 GOLGA8KD6RF30 607 aa9.46□□□□□ -0.9
SNCA-201ENST00000336904 MAGOHP61326 146 aaKnown RBP9.46□□□□□ -0.9
SNCA-201ENST00000336904 TMEM62Q0P6H9 643 aa9.46□□□□□ -0.9
SNCA-201ENST00000336904 CLEC16AQ2KHT3 1053 aa9.46□□□□□ -0.9
SNCA-201ENST00000336904 TXNRD3NBQ6F5E7 133 aa9.46□□□□□ -0.9
SNCA-201ENST00000336904 MYPNQ86TC9 1320 aa9.46□□□□□ -0.9
SNCA-201ENST00000336904 GPC2Q8N158 579 aa9.46□□□□□ -0.9
SNCA-201ENST00000336904 RBBP8NLQ8NC74 664 aaPredicted RBP9.46□□□□□ -0.9
SNCA-201ENST00000336904 FBXL18Q96ME1 805 aa9.46□□□□□ -0.9
SNCA-201ENST00000336904 SPATA33Q96N06 139 aa9.46□□□□□ -0.9
SNCA-201ENST00000336904 NTPCRQ9BSD7 190 aaKnown RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms