RNA–Protein interactions for RNA: ENST00000334352.8

USP16-201, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP16, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-201ENST00000334352 GPR62Q9BZJ7 368 aa7.01□□□□□ -1.29
USP16-201ENST00000334352 CDT1Q9H211 546 aa7.01□□□□□ -1.29
USP16-201ENST00000334352 ASB7Q9H672 318 aa7.01□□□□□ -1.29
USP16-201ENST00000334352 AFF4Q9UHB7 1163 aaKnown RBP7.01□□□□□ -1.29
USP16-201ENST00000334352 C2CD2Q9Y426 696 aa7.01□□□□□ -1.29
USP16-201ENST00000334352 TTC26A0AVF1 554 aa7.01□□□□□ -1.29
USP16-201ENST00000334352 PER2O15055 1255 aa7.01□□□□□ -1.29
USP16-201ENST00000334352 RECQL4O94761 1208 aa7.01□□□□□ -1.29
USP16-201ENST00000334352 PSMD5Q16401 504 aa7.01□□□□□ -1.29
USP16-201ENST00000334352 ATL3Q6DD88 541 aa7.01□□□□□ -1.29
USP16-201ENST00000334352 SLC44A3Q8N4M1 653 aa7.01□□□□□ -1.29
USP16-201ENST00000334352 TMEM105Q8N8V8 129 aa7.01□□□□□ -1.29
USP16-201ENST00000334352 CUEDC2Q9H467 287 aa7.01□□□□□ -1.29
USP16-201ENST00000334352 MAGEF1Q9HAY2 307 aa7.01□□□□□ -1.29
USP16-201ENST00000334352 KCNK12Q9HB15 430 aa7.01□□□□□ -1.29
USP16-201ENST00000334352 CGNQ9P2M7 1197 aaKnown RBP7.01□□□□□ -1.29
USP16-201ENST00000334352 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.01□□□□□ -1.29
USP16-201ENST00000334352 ZNF318Q5VUA4 2279 aa7□□□□□ -1.29
USP16-201ENST00000334352 SMIM28A0A1B0GU29 152 aa7□□□□□ -1.29
USP16-201ENST00000334352 CCDC195A0A1B0GUA6 201 aa7□□□□□ -1.29
USP16-201ENST00000334352 FAM86C2PA6NEL3 165 aa7□□□□□ -1.29
USP16-201ENST00000334352 INO80B-WBP1J3KQ70 363 aa7□□□□□ -1.29
USP16-201ENST00000334352 AKAP3O75969 853 aa7□□□□□ -1.29
USP16-201ENST00000334352 STAU1O95793 577 aaKnown RBP7□□□□□ -1.29
USP16-201ENST00000334352 EDN1P05305 212 aa7□□□□□ -1.29
USP16-201ENST00000334352 GAP43P17677 238 aa7□□□□□ -1.29
USP16-201ENST00000334352 ATP2B1P20020 1258 aa7□□□□□ -1.29
USP16-201ENST00000334352 FSHRP23945 695 aa7□□□□□ -1.29
USP16-201ENST00000334352 CCT6AP40227 531 aaKnown RBP7□□□□□ -1.29
USP16-201ENST00000334352 DMP1Q13316 513 aaPredicted RBP7□□□□□ -1.29
USP16-201ENST00000334352 SLFN12LQ6IEE8 588 aa7□□□□□ -1.29
USP16-201ENST00000334352 SKAP1Q86WV1 359 aa7□□□□□ -1.29
USP16-201ENST00000334352 NECAB1Q8N987 351 aa7□□□□□ -1.29
USP16-201ENST00000334352 ZNF461Q8TAF7 563 aa7□□□□□ -1.29
USP16-201ENST00000334352 FIZ1Q96SL8 496 aa7□□□□□ -1.29
USP16-201ENST00000334352 LRRC3Q9BY71 257 aa7□□□□□ -1.29
USP16-201ENST00000334352 PLXND1Q9Y4D7 1925 aa7□□□□□ -1.29
USP16-201ENST00000334352 PRR23AA6NEV1 266 aa7□□□□□ -1.29
USP16-201ENST00000334352 MAN2B1O00754 1011 aa7□□□□□ -1.29
USP16-201ENST00000334352 MEFVO15553 781 aaPredicted RBP7□□□□□ -1.29
USP16-201ENST00000334352 TADA2AO75478 443 aa7□□□□□ -1.29
USP16-201ENST00000334352 IL18RAPO95256 599 aa7□□□□□ -1.29
USP16-201ENST00000334352 C7P10643 843 aa7□□□□□ -1.29
USP16-201ENST00000334352 SMTNP53814 917 aa7□□□□□ -1.29
USP16-201ENST00000334352 YARSP54577 528 aaKnown RBP7□□□□□ -1.29
USP16-201ENST00000334352 POTEGQ6S5H5 508 aa7□□□□□ -1.29
USP16-201ENST00000334352 MAP4K3Q8IVH8 894 aa7□□□□□ -1.29
USP16-201ENST00000334352 CPB2Q96IY4 423 aa7□□□□□ -1.29
USP16-201ENST00000334352 TBC1D32Q96NH3 1257 aa7□□□□□ -1.29
USP16-201ENST00000334352 MYADMQ96S97 322 aa7□□□□□ -1.29
USP16-201ENST00000334352 FAM124BQ9H5Z6 455 aaPredicted RBP7□□□□□ -1.29
USP16-201ENST00000334352 COMMD8Q9NX08 183 aa7□□□□□ -1.29
USP16-201ENST00000334352 COL4A3Q01955 1670 aa6.99□□□□□ -1.29
USP16-201ENST00000334352 POTEMA6NI47 508 aa6.99□□□□□ -1.29
USP16-201ENST00000334352 K7ERI5 159 aa6.99□□□□□ -1.29
USP16-201ENST00000334352 ZBTB39O15060 712 aa6.99□□□□□ -1.29
USP16-201ENST00000334352 B4GALT5O43286 388 aa6.99□□□□□ -1.29
USP16-201ENST00000334352 N4BP1O75113 896 aaKnown RBP6.99□□□□□ -1.29
USP16-201ENST00000334352 HIP1RO75146 1068 aa6.99□□□□□ -1.29
USP16-201ENST00000334352 KIF4AO95239 1232 aa6.99□□□□□ -1.29
USP16-201ENST00000334352 ATF2P15336 505 aa6.99□□□□□ -1.29
USP16-201ENST00000334352 PTPN2P17706 415 aa6.99□□□□□ -1.29
USP16-201ENST00000334352 PDCP20941 246 aa6.99□□□□□ -1.29
USP16-201ENST00000334352 OR1G1P47890 313 aa6.99□□□□□ -1.29
USP16-201ENST00000334352 PTGDRQ13258 359 aa6.99□□□□□ -1.29
USP16-201ENST00000334352 SPATA1Q5VX52 437 aa6.99□□□□□ -1.29
USP16-201ENST00000334352 RBM23Q86U06 439 aaKnown RBP6.99□□□□□ -1.29
USP16-201ENST00000334352 SMG7Q92540 1137 aaKnown RBP6.99□□□□□ -1.29
USP16-201ENST00000334352 ACAP3Q96P50 834 aa6.99□□□□□ -1.29
USP16-201ENST00000334352 TRIM6Q9C030 488 aaPredicted RBP6.99□□□□□ -1.29
USP16-201ENST00000334352 ABCB6Q9NP58 842 aa6.99□□□□□ -1.29
USP16-201ENST00000334352 OLFML3Q9NRN5 406 aa6.99□□□□□ -1.29
USP16-201ENST00000334352 UBQLN1Q9UMX0 589 aaKnown RBP6.99□□□□□ -1.29
USP16-201ENST00000334352 PCDHGA2Q9Y5H1 932 aa6.99□□□□□ -1.29
USP16-201ENST00000334352 A0A0B4J269 797 aa6.99□□□□□ -1.29
USP16-201ENST00000334352 CCDC163A0A0D9SF12 145 aa6.99□□□□□ -1.29
USP16-201ENST00000334352 PIRO00625 290 aa6.99□□□□□ -1.29
USP16-201ENST00000334352 USO1O60763 962 aaKnown RBP6.99□□□□□ -1.29
USP16-201ENST00000334352 FCARP24071 287 aa6.99□□□□□ -1.29
USP16-201ENST00000334352 MCM7P33993 719 aa6.99□□□□□ -1.29
USP16-201ENST00000334352 CNR2P34972 360 aa6.99□□□□□ -1.29
USP16-201ENST00000334352 VCPP55072 806 aaKnown RBP6.99□□□□□ -1.29
USP16-201ENST00000334352 RTP2Q5QGT7 225 aa6.99□□□□□ -1.29
USP16-201ENST00000334352 CCDC43Q96MW1 224 aaKnown RBP6.99□□□□□ -1.29
USP16-201ENST00000334352 LRRC27Q9C0I9 530 aa6.99□□□□□ -1.29
USP16-201ENST00000334352 C8orf33Q9H7E9 229 aaPredicted RBP6.99□□□□□ -1.29
USP16-201ENST00000334352 SNTG2Q9NY99 539 aa6.99□□□□□ -1.29
USP16-201ENST00000334352 CPSF3Q9UKF6 684 aaKnown RBP6.99□□□□□ -1.29
USP16-201ENST00000334352 GINS2Q9Y248 185 aa6.99□□□□□ -1.29
USP16-201ENST00000334352 PTPRDP23468 1912 aa6.99□□□□□ -1.29
USP16-201ENST00000334352 CHD7Q9P2D1 2997 aa6.99□□□□□ -1.29
USP16-201ENST00000334352 POMCP01189 267 aa6.98□□□□□ -1.29
USP16-201ENST00000334352 GARTP22102 1010 aa6.98□□□□□ -1.29
USP16-201ENST00000334352 AFF1P51825 1210 aaKnown RBP6.98□□□□□ -1.29
USP16-201ENST00000334352 CYP4A11Q02928 519 aa6.98□□□□□ -1.29
USP16-201ENST00000334352 NOLC1Q14978 699 aaKnown RBP eCLIP6.98□□□□□ -1.29
USP16-201ENST00000334352 POSTNQ15063 836 aa6.98□□□□□ -1.29
USP16-201ENST00000334352 ARSHQ5FYA8 562 aa6.98□□□□□ -1.29
USP16-201ENST00000334352 PPM1LQ5SGD2 360 aa6.98□□□□□ -1.29
USP16-201ENST00000334352 C12orf56Q8IXR9 622 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms