RNA–Protein interactions for RNA: ENST00000332246.10

CSGALNACT1-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 3,872 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-201ENST00000332246 IRF2BP2Q7Z5L9 587 aa10.41□□□□□ -0.74
CSGALNACT1-201ENST00000332246 IQCKQ8N0W5 287 aa10.41□□□□□ -0.74
CSGALNACT1-201ENST00000332246 PRPF38AQ8NAV1 312 aaKnown RBP10.41□□□□□ -0.74
CSGALNACT1-201ENST00000332246 CAVIN3Q969G5 261 aa10.41□□□□□ -0.74
CSGALNACT1-201ENST00000332246 SCYL1Q96KG9 808 aa10.41□□□□□ -0.74
CSGALNACT1-201ENST00000332246 TMEM121Q9BTD3 319 aa10.41□□□□□ -0.74
CSGALNACT1-201ENST00000332246 CARD9Q9H257 536 aa10.41□□□□□ -0.74
CSGALNACT1-201ENST00000332246 SUFUQ9UMX1 484 aa10.41□□□□□ -0.74
CSGALNACT1-201ENST00000332246 AKAP12Q02952 1782 aa10.41□□□□□ -0.74
CSGALNACT1-201ENST00000332246 DKC1O60832 514 aaKnown RBP eCLIP10.41□□□□□ -0.74
CSGALNACT1-201ENST00000332246 HLA-DRAP01903 254 aa10.41□□□□□ -0.74
CSGALNACT1-201ENST00000332246 ETS1P14921 441 aa10.41□□□□□ -0.74
CSGALNACT1-201ENST00000332246 POLR2BP30876 1174 aaKnown RBP10.41□□□□□ -0.74
CSGALNACT1-201ENST00000332246 SOX11P35716 441 aa10.41□□□□□ -0.74
CSGALNACT1-201ENST00000332246 ATL2Q8NHH9 583 aa10.41□□□□□ -0.74
CSGALNACT1-201ENST00000332246 AJAP1Q9UKB5 411 aaPredicted RBP10.41□□□□□ -0.74
CSGALNACT1-201ENST00000332246 AFF2P51816 1311 aa10.41□□□□□ -0.74
CSGALNACT1-201ENST00000332246 CACNA1FO60840 1977 aa10.41□□□□□ -0.74
CSGALNACT1-201ENST00000332246 CPP00450 1065 aa10.4□□□□□ -0.74
CSGALNACT1-201ENST00000332246 MAGEA4P43358 317 aa10.4□□□□□ -0.74
CSGALNACT1-201ENST00000332246 SLC12A3P55017 1021 aa10.4□□□□□ -0.74
CSGALNACT1-201ENST00000332246 NLRP11P59045 1033 aaKnown RBP10.4□□□□□ -0.74
CSGALNACT1-201ENST00000332246 TMEM119Q4V9L6 283 aa10.4□□□□□ -0.74
CSGALNACT1-201ENST00000332246 KDELC2Q7Z4H8 507 aa10.4□□□□□ -0.74
CSGALNACT1-201ENST00000332246 RHOT1Q8IXI2 618 aa10.4□□□□□ -0.74
CSGALNACT1-201ENST00000332246 DNAAF3Q8N9W5 541 aa10.4□□□□□ -0.74
CSGALNACT1-201ENST00000332246 ZBTB45Q96K62 511 aaPredicted RBP10.4□□□□□ -0.74
CSGALNACT1-201ENST00000332246 PITPNM2Q9BZ72 1349 aa10.4□□□□□ -0.74
CSGALNACT1-201ENST00000332246 GDF3Q9NR23 364 aa10.4□□□□□ -0.74
CSGALNACT1-201ENST00000332246 NYAP2Q9P242 653 aa10.4□□□□□ -0.74
CSGALNACT1-201ENST00000332246 CPSF2Q9P2I0 782 aaKnown RBP10.4□□□□□ -0.74
CSGALNACT1-201ENST00000332246 IGSF9BQ9UPX0 1349 aa10.4□□□□□ -0.74
CSGALNACT1-201ENST00000332246 SLC4A7Q9Y6M7 1214 aa10.4□□□□□ -0.74
CSGALNACT1-201ENST00000332246 LOC100653049A0A140TA62 436 aa10.4□□□□□ -0.74
CSGALNACT1-201ENST00000332246 KDM4FA0A1W2PPD8 638 aa10.4□□□□□ -0.74
CSGALNACT1-201ENST00000332246 BANF1O75531 89 aa10.4□□□□□ -0.74
CSGALNACT1-201ENST00000332246 KRT34O76011 436 aa10.4□□□□□ -0.74
CSGALNACT1-201ENST00000332246 TJP3O95049 919 aa10.4□□□□□ -0.74
CSGALNACT1-201ENST00000332246 ANP32DO95626 131 aa10.4□□□□□ -0.74
CSGALNACT1-201ENST00000332246 APRTP07741 180 aa10.4□□□□□ -0.74
CSGALNACT1-201ENST00000332246 CYP11B1P15538 503 aa10.4□□□□□ -0.74
CSGALNACT1-201ENST00000332246 PSMC5P62195 406 aa10.4□□□□□ -0.74
CSGALNACT1-201ENST00000332246 LGSNQ5TDP6 509 aa10.4□□□□□ -0.74
CSGALNACT1-201ENST00000332246 C3orf62Q6ZUJ4 267 aa10.4□□□□□ -0.74
CSGALNACT1-201ENST00000332246 PCGF5Q86SE9 256 aa10.4□□□□□ -0.74
CSGALNACT1-201ENST00000332246 PIP4K2CQ8TBX8 421 aa10.4□□□□□ -0.74
CSGALNACT1-201ENST00000332246 hCG_2014768A0A024R1R8 64 aa10.4□□□□□ -0.74
CSGALNACT1-201ENST00000332246 MEIS2O14770 477 aa10.4□□□□□ -0.74
CSGALNACT1-201ENST00000332246 CAPN9O14815 690 aa10.4□□□□□ -0.74
CSGALNACT1-201ENST00000332246 ZBED1O96006 694 aa10.4□□□□□ -0.74
CSGALNACT1-201ENST00000332246 AGTP01019 485 aa10.4□□□□□ -0.74
CSGALNACT1-201ENST00000332246 ENO1P06733 434 aaKnown RBP10.4□□□□□ -0.74
CSGALNACT1-201ENST00000332246 KCNJ2P63252 427 aa10.4□□□□□ -0.74
CSGALNACT1-201ENST00000332246 LVRNQ6Q4G3 990 aa10.4□□□□□ -0.74
CSGALNACT1-201ENST00000332246 SV2AQ7L0J3 742 aa10.4□□□□□ -0.74
CSGALNACT1-201ENST00000332246 SAMD7Q7Z3H4 446 aa10.4□□□□□ -0.74
CSGALNACT1-201ENST00000332246 NOP9Q86U38 636 aaKnown RBP10.4□□□□□ -0.74
CSGALNACT1-201ENST00000332246 RNF149Q8NC42 400 aa10.4□□□□□ -0.74
CSGALNACT1-201ENST00000332246 C1orf131Q8NDD1 294 aaKnown RBP10.4□□□□□ -0.74
CSGALNACT1-201ENST00000332246 UBA3Q8TBC4 463 aa10.4□□□□□ -0.74
CSGALNACT1-201ENST00000332246 ATG4CQ96DT6 458 aa10.4□□□□□ -0.74
CSGALNACT1-201ENST00000332246 CALR3Q96L12 384 aaKnown RBP10.4□□□□□ -0.74
CSGALNACT1-201ENST00000332246 AGAP3Q96P47 875 aa10.4□□□□□ -0.74
CSGALNACT1-201ENST00000332246 TTYH3Q9C0H2 523 aa10.4□□□□□ -0.74
CSGALNACT1-201ENST00000332246 GANQ9H2C0 597 aa10.4□□□□□ -0.74
CSGALNACT1-201ENST00000332246 RPAP3Q9H6T3 665 aaPredicted RBP10.4□□□□□ -0.74
CSGALNACT1-201ENST00000332246 PNMA3Q9UL41 463 aa10.4□□□□□ -0.74
CSGALNACT1-201ENST00000332246 TULP2O00295 520 aa10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 CST8O60676 142 aa10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 STAMBPO95630 424 aa10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 SLC4A1P02730 911 aa10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 HMGB2P26583 209 aaKnown RBP10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 GTF2H1P32780 548 aa10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 CDH6P55285 790 aa10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 ITGB3BPQ13352 177 aaPredicted RBP10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 GRAMD1BQ3KR37 738 aa10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 FAM102AQ5T9C2 384 aaPredicted RBP10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 APOBEC3HQ6NTF7 200 aaKnown RBP10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 TRIM50Q86XT4 487 aa10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 RBBP8NLQ8NC74 664 aaPredicted RBP10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 TMEM35BQ8NCS4 154 aa10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 BBOF1Q8ND07 529 aa10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 ACTRT1Q8TDG2 376 aa10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 SYN2Q92777 582 aaPredicted RBP10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 C12orf65Q9H3J6 166 aaKnown RBP10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 TXLNGQ9NUQ3 528 aa10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 HESX1Q9UBX0 185 aa10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 ARL2BPQ9Y2Y0 163 aa10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 PCDHGC5Q9Y5F6 944 aa10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 PCDHA10Q9Y5I2 948 aa10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 DCCP43146 1447 aa10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 COPEO14579 308 aa10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 ZBTB7AO95365 584 aa10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 PSAPP07602 524 aa10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 KRT4P19013 534 aa10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 SESN2P58004 480 aaPredicted RBP10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 RNASELQ05823 741 aaKnown RBP10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 TMEM62Q0P6H9 643 aa10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 ZNF699Q32M78 642 aa10.39□□□□□ -0.75
CSGALNACT1-201ENST00000332246 MAP7D1Q3KQU3 841 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms