RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 TTC39BQ5VTQ0 682 aaPredicted RBP7.43□□□□□ -1.22
SMC1A-201ENST00000322213 IZUMO3Q5VZ72 239 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 JAMLQ86YT9 394 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 STKLD1Q8NE28 680 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 TPCN2Q8NHX9 752 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 EPS8L3Q8TE67 593 aaKnown RBP7.43□□□□□ -1.22
SMC1A-201ENST00000322213 C1orf50Q9BV19 199 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 CACYBPQ9HB71 228 aaKnown RBP7.43□□□□□ -1.22
SMC1A-201ENST00000322213 DIABLOQ9NR28 239 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 DDX56Q9NY93 547 aaKnown RBP7.43□□□□□ -1.22
SMC1A-201ENST00000322213 HBS1LQ9Y450 684 aaKnown RBP7.43□□□□□ -1.22
SMC1A-201ENST00000322213 CHD3Q12873 2000 aaKnown RBP7.43□□□□□ -1.22
SMC1A-201ENST00000322213 NWD1Q149M9 1564 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 SLC16A3O15427 465 aaKnown RBP7.43□□□□□ -1.22
SMC1A-201ENST00000322213 TUBA1BP68363 451 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 AASDHQ4L235 1098 aaPredicted RBP7.43□□□□□ -1.22
SMC1A-201ENST00000322213 TUBA1AQ71U36 451 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 TMEM110Q86TL2 294 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 ANKS1AQ92625 1134 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 RTN2O75298 545 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 ZNF18P17022 549 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 PSMA4P25789 261 aaKnown RBP7.43□□□□□ -1.22
SMC1A-201ENST00000322213 KIF22Q14807 665 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 LVRNQ6Q4G3 990 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 TBCKQ8TEA7 893 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 AGAP11Q8TF27 550 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 MTA3Q9BTC8 594 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 PHTF1Q9UMS5 762 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 ANGPTL3Q9Y5C1 460 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 GOLGA8CPA6NN73 597 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 BBS9Q3SYG4 887 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 TTMPQ5BVD1 217 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 LRRC8EQ6NSJ5 796 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 ZNF554Q86TJ5 538 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 MB21D2Q8IYB1 491 aaPredicted RBP7.43□□□□□ -1.22
SMC1A-201ENST00000322213 SLC13A1Q9BZW2 595 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 RABGEF1Q9UJ41 708 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 GMEB1Q9Y692 573 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 M0R3G1 203 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 XPO1O14980 1071 aaKnown RBP7.43□□□□□ -1.22
SMC1A-201ENST00000322213 SLC26A4O43511 780 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 CDC25AP30304 524 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 IGBP1P78318 339 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 IL1RL1Q01638 556 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 MAEAQ7L5Y9 396 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 FAF2Q96CS3 445 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 FAXDC2Q96IV6 333 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 PRPF18Q99633 342 aaKnown RBP7.43□□□□□ -1.22
SMC1A-201ENST00000322213 GDF3Q9NR23 364 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 NIP7Q9Y221 180 aaKnown RBP eCLIP7.43□□□□□ -1.22
SMC1A-201ENST00000322213 MROH1Q8NDA8 1641 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 MYO3BQ8WXR4 1341 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 ITGB4P16144 1822 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 PEAK1Q9H792 1746 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 CCDC189A1A4V9 331 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 MXI1P50539 228 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 TUBA3CQ13748 450 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 FAM102BQ5T8I3 360 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 MTHFD1LQ6UB35 978 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 MREGQ8N565 214 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 DHX38Q92620 1227 aaKnown RBP7.43□□□□□ -1.22
SMC1A-201ENST00000322213 TMA7Q9Y2S6 64 aaKnown RBP7.43□□□□□ -1.22
SMC1A-201ENST00000322213 ZBED1O96006 694 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 FAM47AQ5JRC9 791 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 TRIM72Q6ZMU5 477 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 GALNT4Q8N4A0 578 aa7.43□□□□□ -1.22
SMC1A-201ENST00000322213 ZMYND8Q9ULU4 1186 aaPredicted RBP7.43□□□□□ -1.22
SMC1A-201ENST00000322213 C6orf229H3BNL8 230 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 TSPAN9O75954 239 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 MARK2Q7KZI7 788 aaKnown RBP7.42□□□□□ -1.22
SMC1A-201ENST00000322213 MTRQ99707 1265 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 ZBED2Q9BTP6 218 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 CALN1Q9BXU9 219 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 CD19P15391 556 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 PSMA2P25787 234 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 SOX6P35712 828 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 LIG4P49917 911 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 PMS1P54277 932 aaKnown RBP7.42□□□□□ -1.22
SMC1A-201ENST00000322213 GEMIN4P57678 1058 aaKnown RBP7.42□□□□□ -1.22
SMC1A-201ENST00000322213 HP1BP3Q5SSJ5 553 aaPredicted RBP7.42□□□□□ -1.22
SMC1A-201ENST00000322213 GIMAP8Q8ND71 665 aaPredicted RBP7.42□□□□□ -1.22
SMC1A-201ENST00000322213 NLRP3Q96P20 1036 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 BTBD10Q9BSF8 475 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 PUS7LQ9H0K6 701 aaKnown RBP7.42□□□□□ -1.22
SMC1A-201ENST00000322213 SMARCAL1Q9NZC9 954 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 LEMD3Q9Y2U8 911 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 DTNAQ9Y4J8 743 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 SMIM31A0A1B0GVY4 71 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 HNRNPDLO14979 420 aaKnown RBP7.42□□□□□ -1.22
SMC1A-201ENST00000322213 CHEK2O96017 543 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 KRT6AP02538 564 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 KRT6BP04259 564 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 FAM58BPP0C7Q3 252 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 PAMP19021 973 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 RAB27AP51159 221 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 TBX2Q13207 712 aaPredicted RBP7.42□□□□□ -1.22
SMC1A-201ENST00000322213 BLMHQ13867 455 aa7.42□□□□□ -1.22
SMC1A-201ENST00000322213 LBRQ14739 615 aaKnown RBP7.42□□□□□ -1.22
SMC1A-201ENST00000322213 PFKFB3Q16875 520 aaPredicted RBP7.42□□□□□ -1.22
SMC1A-201ENST00000322213 FBXO31Q5XUX0 539 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms