RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 JAK3P52333 1124 aa13.51□□□□□ -0.25
DNMT3A-202ENST00000321117 KLC1Q07866 573 aa13.51□□□□□ -0.25
DNMT3A-202ENST00000321117 HIF1AQ16665 826 aa13.51□□□□□ -0.25
DNMT3A-202ENST00000321117 MTERF2Q49AM1 385 aa13.51□□□□□ -0.25
DNMT3A-202ENST00000321117 ZNF394Q53GI3 561 aa13.51□□□□□ -0.25
DNMT3A-202ENST00000321117 LMBRD2Q68DH5 695 aaPredicted RBP13.51□□□□□ -0.25
DNMT3A-202ENST00000321117 CRELD2Q6UXH1 353 aaPredicted RBP13.51□□□□□ -0.25
DNMT3A-202ENST00000321117 PPP4R1Q8TF05 950 aa13.51□□□□□ -0.25
DNMT3A-202ENST00000321117 AGAP11Q8TF27 550 aa13.51□□□□□ -0.25
DNMT3A-202ENST00000321117 ALG13Q9NP73 1137 aaKnown RBP13.51□□□□□ -0.25
DNMT3A-202ENST00000321117 UBN1Q9NPG3 1134 aa13.51□□□□□ -0.25
DNMT3A-202ENST00000321117 POLLQ9UGP5 575 aa13.51□□□□□ -0.25
DNMT3A-202ENST00000321117 HAO1Q9UJM8 370 aa13.51□□□□□ -0.25
DNMT3A-202ENST00000321117 PHTF1Q9UMS5 762 aa13.51□□□□□ -0.25
DNMT3A-202ENST00000321117 GOLGA8RI6L899 631 aa13.51□□□□□ -0.25
DNMT3A-202ENST00000321117 IL1R1P14778 569 aa13.51□□□□□ -0.25
DNMT3A-202ENST00000321117 NPR1P16066 1061 aa13.51□□□□□ -0.25
DNMT3A-202ENST00000321117 PAX7P23759 505 aa13.51□□□□□ -0.25
DNMT3A-202ENST00000321117 SLC47A2Q86VL8 602 aa13.51□□□□□ -0.25
DNMT3A-202ENST00000321117 LDHDQ86WU2 507 aa13.51□□□□□ -0.25
DNMT3A-202ENST00000321117 ERICH1Q86X53 443 aa13.51□□□□□ -0.25
DNMT3A-202ENST00000321117 NLGN1Q8N2Q7 840 aa13.51□□□□□ -0.25
DNMT3A-202ENST00000321117 LARGE2Q8N3Y3 721 aa13.51□□□□□ -0.25
DNMT3A-202ENST00000321117 TMEM35BQ8NCS4 154 aa13.51□□□□□ -0.25
DNMT3A-202ENST00000321117 TMEM8AQ9HCN3 771 aa13.51□□□□□ -0.25
DNMT3A-202ENST00000321117 PCYOX1Q9UHG3 505 aa13.51□□□□□ -0.25
DNMT3A-202ENST00000321117 NAALADL1Q9UQQ1 740 aa13.51□□□□□ -0.25
DNMT3A-202ENST00000321117 C4AP0C0L4 1744 aa13.51□□□□□ -0.25
DNMT3A-202ENST00000321117 C4BP0C0L5 1744 aa13.51□□□□□ -0.25
DNMT3A-202ENST00000321117 HNRNPCL1O60812 293 aaKnown RBP13.51□□□□□ -0.25
DNMT3A-202ENST00000321117 PSMC5P62195 406 aa13.51□□□□□ -0.25
DNMT3A-202ENST00000321117 KCNJ2P63252 427 aa13.51□□□□□ -0.25
DNMT3A-202ENST00000321117 DARS2Q6PI48 645 aaKnown RBP13.51□□□□□ -0.25
DNMT3A-202ENST00000321117 LBHD1Q9BQE6 289 aaPredicted RBP13.51□□□□□ -0.25
DNMT3A-202ENST00000321117 KIAA1586Q9HCI6 787 aa13.51□□□□□ -0.25
DNMT3A-202ENST00000321117 ERVK-5Q9HDB9 667 aa13.51□□□□□ -0.25
DNMT3A-202ENST00000321117 PPP1R1BQ9UD71 204 aaPredicted RBP13.51□□□□□ -0.25
DNMT3A-202ENST00000321117 MCM8Q9UJA3 840 aa13.51□□□□□ -0.25
DNMT3A-202ENST00000321117 PCDHB2Q9Y5E7 798 aa13.51□□□□□ -0.25
DNMT3A-202ENST00000321117 COPEO14579 308 aa13.5□□□□□ -0.25
DNMT3A-202ENST00000321117 IRX4P78413 519 aa13.5□□□□□ -0.25
DNMT3A-202ENST00000321117 GPD1LQ8N335 351 aa13.5□□□□□ -0.25
DNMT3A-202ENST00000321117 MCPH1Q8NEM0 835 aa13.5□□□□□ -0.25
DNMT3A-202ENST00000321117 CRAMP1Q96RY5 1269 aa13.5□□□□□ -0.25
DNMT3A-202ENST00000321117 CYTH2Q99418 400 aa13.5□□□□□ -0.25
DNMT3A-202ENST00000321117 DNAJC18Q9H819 358 aa13.5□□□□□ -0.25
DNMT3A-202ENST00000321117 PSMC3IPQ9P2W1 217 aaPredicted RBP13.5□□□□□ -0.25
DNMT3A-202ENST00000321117 PARP4Q9UKK3 1724 aaKnown RBP13.5□□□□□ -0.25
DNMT3A-202ENST00000321117 UBAP1LF5GYI3 381 aa13.5□□□□□ -0.25
DNMT3A-202ENST00000321117 K7ERI5 159 aa13.5□□□□□ -0.25
DNMT3A-202ENST00000321117 PSMA2P25787 234 aa13.5□□□□□ -0.25
DNMT3A-202ENST00000321117 MARK3P27448 753 aa13.5□□□□□ -0.25
DNMT3A-202ENST00000321117 TMPRSS15P98073 1019 aa13.5□□□□□ -0.25
DNMT3A-202ENST00000321117 BSPRYQ5W0U4 402 aa13.5□□□□□ -0.25
DNMT3A-202ENST00000321117 ARHGEF19Q8IW93 802 aa13.5□□□□□ -0.25
DNMT3A-202ENST00000321117 KCTD6Q8NC69 237 aa13.5□□□□□ -0.25
DNMT3A-202ENST00000321117 SUPT20HQ8NEM7 779 aa13.5□□□□□ -0.25
DNMT3A-202ENST00000321117 DNAJC9Q8WXX5 260 aa13.5□□□□□ -0.25
DNMT3A-202ENST00000321117 SLC7A3Q8WY07 619 aa13.5□□□□□ -0.25
DNMT3A-202ENST00000321117 RIT2Q99578 217 aa13.5□□□□□ -0.25
DNMT3A-202ENST00000321117 DDX4Q9NQI0 724 aaKnown RBP13.5□□□□□ -0.25
DNMT3A-202ENST00000321117 PCDHA3Q9Y5H8 950 aa13.5□□□□□ -0.25
DNMT3A-202ENST00000321117 CALB1P05937 261 aa13.5□□□□□ -0.25
DNMT3A-202ENST00000321117 APBB1IPQ7Z5R6 666 aaPredicted RBP13.5□□□□□ -0.25
DNMT3A-202ENST00000321117 TEX9Q8N6V9 391 aa13.5□□□□□ -0.25
DNMT3A-202ENST00000321117 TTC13Q8NBP0 860 aa13.5□□□□□ -0.25
DNMT3A-202ENST00000321117 PRCCQ92733 491 aaPredicted RBP13.5□□□□□ -0.25
DNMT3A-202ENST00000321117 UNC45AQ9H3U1 944 aa13.5□□□□□ -0.25
DNMT3A-202ENST00000321117 NR2E1Q9Y466 385 aa13.5□□□□□ -0.25
DNMT3A-202ENST00000321117 LPXNO60711 386 aa13.5□□□□□ -0.25
DNMT3A-202ENST00000321117 KRT37O76014 449 aa13.5□□□□□ -0.25
DNMT3A-202ENST00000321117 TNNC2P02585 160 aa13.5□□□□□ -0.25
DNMT3A-202ENST00000321117 PAEPP09466 180 aa13.5□□□□□ -0.25
DNMT3A-202ENST00000321117 KRT76Q01546 638 aa13.5□□□□□ -0.25
DNMT3A-202ENST00000321117 MYBPC2Q14324 1141 aa13.5□□□□□ -0.25
DNMT3A-202ENST00000321117 KIF22Q14807 665 aa13.5□□□□□ -0.25
DNMT3A-202ENST00000321117 CCDC14Q49A88 953 aa13.5□□□□□ -0.25
DNMT3A-202ENST00000321117 LVRNQ6Q4G3 990 aa13.5□□□□□ -0.25
DNMT3A-202ENST00000321117 CBWD2Q8IUF1 395 aa13.5□□□□□ -0.25
DNMT3A-202ENST00000321117 FAM161BQ96MY7 647 aa13.5□□□□□ -0.25
DNMT3A-202ENST00000321117 PI4K2AQ9BTU6 479 aa13.5□□□□□ -0.25
DNMT3A-202ENST00000321117 MSTO1Q9BUK6 570 aa13.5□□□□□ -0.25
DNMT3A-202ENST00000321117 PARVAQ9NVD7 372 aa13.5□□□□□ -0.25
DNMT3A-202ENST00000321117 BCL9LQ86UU0 1499 aa13.49□□□□□ -0.25
DNMT3A-202ENST00000321117 ZBTB39O15060 712 aa13.49□□□□□ -0.25
DNMT3A-202ENST00000321117 CCDC22O60826 627 aa13.49□□□□□ -0.25
DNMT3A-202ENST00000321117 SLITRK3O94933 977 aa13.49□□□□□ -0.25
DNMT3A-202ENST00000321117 TAL1P17542 331 aaPredicted RBP13.49□□□□□ -0.25
DNMT3A-202ENST00000321117 ABCD1P33897 745 aa13.49□□□□□ -0.25
DNMT3A-202ENST00000321117 SERPINB6P35237 376 aa13.49□□□□□ -0.25
DNMT3A-202ENST00000321117 MRPS35P82673 323 aaKnown RBP13.49□□□□□ -0.25
DNMT3A-202ENST00000321117 C2CD6Q53TS8 623 aa13.49□□□□□ -0.25
DNMT3A-202ENST00000321117 ATG16L1Q676U5 607 aa13.49□□□□□ -0.25
DNMT3A-202ENST00000321117 RHPN2Q8IUC4 686 aa13.49□□□□□ -0.25
DNMT3A-202ENST00000321117 TLCD1Q96CP7 247 aa13.49□□□□□ -0.25
DNMT3A-202ENST00000321117 SH3GL3Q99963 347 aa13.49□□□□□ -0.25
DNMT3A-202ENST00000321117 TMEM59LQ9UK28 342 aa13.49□□□□□ -0.25
DNMT3A-202ENST00000321117 RRP1BQ14684 758 aaKnown RBP13.49□□□□□ -0.25
DNMT3A-202ENST00000321117 EXOC3L1Q86VI1 746 aa13.49□□□□□ -0.25
DNMT3A-202ENST00000321117 TEX2Q8IWB9 1127 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms