RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 POTEMA6NI47 508 aa17.73■□□□□ 0.43
SMCHD1-201ENST00000320876 GDF11O95390 407 aa17.73■□□□□ 0.43
SMCHD1-201ENST00000320876 APRTP07741 180 aa17.73■□□□□ 0.43
SMCHD1-201ENST00000320876 KYAT1Q16773 422 aa17.73■□□□□ 0.43
SMCHD1-201ENST00000320876 SFR1Q86XK3 245 aa17.73■□□□□ 0.43
SMCHD1-201ENST00000320876 INPP5DQ92835 1189 aa17.73■□□□□ 0.43
SMCHD1-201ENST00000320876 APPL1Q9UKG1 709 aa17.73■□□□□ 0.43
SMCHD1-201ENST00000320876 USP17L3A6NCW0 530 aa17.73■□□□□ 0.43
SMCHD1-201ENST00000320876 USP17L4A6NCW7 530 aa17.73■□□□□ 0.43
SMCHD1-201ENST00000320876 NECTIN1Q15223 517 aa17.73■□□□□ 0.43
SMCHD1-201ENST00000320876 ADRM1Q16186 407 aa17.73■□□□□ 0.43
SMCHD1-201ENST00000320876 ZNF394Q53GI3 561 aa17.73■□□□□ 0.43
SMCHD1-201ENST00000320876 USP17L1Q7RTZ2 530 aa17.73■□□□□ 0.43
SMCHD1-201ENST00000320876 XPO7Q9UIA9 1087 aaKnown RBP17.73■□□□□ 0.43
SMCHD1-201ENST00000320876 PRDM15P57071 1507 aaPredicted RBP17.73■□□□□ 0.43
SMCHD1-201ENST00000320876 H2AFYO75367 372 aaKnown RBP17.73■□□□□ 0.43
SMCHD1-201ENST00000320876 VSNL1P62760 191 aa17.73■□□□□ 0.43
SMCHD1-201ENST00000320876 ANGPT1Q15389 498 aa17.73■□□□□ 0.43
SMCHD1-201ENST00000320876 UVRAGQ9P2Y5 699 aa17.73■□□□□ 0.43
SMCHD1-201ENST00000320876 CACNA1FO60840 1977 aa17.72■□□□□ 0.43
SMCHD1-201ENST00000320876 HSD17B4P51659 736 aa17.72■□□□□ 0.43
SMCHD1-201ENST00000320876 PADI6Q6TGC4 694 aa17.72■□□□□ 0.43
SMCHD1-201ENST00000320876 TLK2Q86UE8 772 aa17.72■□□□□ 0.43
SMCHD1-201ENST00000320876 ALG13Q9NP73 1137 aaKnown RBP17.72■□□□□ 0.43
SMCHD1-201ENST00000320876 ZC3H7BQ9UGR2 993 aaKnown RBP17.72■□□□□ 0.43
SMCHD1-201ENST00000320876 SFI1A8K8P3 1242 aa17.72■□□□□ 0.43
SMCHD1-201ENST00000320876 ALBP02768 609 aa17.72■□□□□ 0.43
SMCHD1-201ENST00000320876 NUP107P57740 925 aa17.72■□□□□ 0.43
SMCHD1-201ENST00000320876 ZNF200P98182 395 aaPredicted RBP17.72■□□□□ 0.43
SMCHD1-201ENST00000320876 RSPH1Q8WYR4 309 aa17.72■□□□□ 0.43
SMCHD1-201ENST00000320876 MYO3BQ8WXR4 1341 aa17.72■□□□□ 0.43
SMCHD1-201ENST00000320876 RNF103O00237 685 aa17.72■□□□□ 0.43
SMCHD1-201ENST00000320876 GINS4Q9BRT9 223 aa17.72■□□□□ 0.43
SMCHD1-201ENST00000320876 NDEL1Q9GZM8 345 aa17.72■□□□□ 0.43
SMCHD1-201ENST00000320876 PCSK1NQ9UHG2 260 aa17.72■□□□□ 0.43
SMCHD1-201ENST00000320876 TMEM191CA6NGB0 347 aa17.72■□□□□ 0.43
SMCHD1-201ENST00000320876 ITIH2P19823 946 aa17.72■□□□□ 0.43
SMCHD1-201ENST00000320876 THEMIS2Q5TEJ8 643 aa17.72■□□□□ 0.43
SMCHD1-201ENST00000320876 KCNA6P17658 529 aa17.72■□□□□ 0.43
SMCHD1-201ENST00000320876 MLH1P40692 756 aa17.72■□□□□ 0.43
SMCHD1-201ENST00000320876 AP3M2P53677 418 aa17.72■□□□□ 0.43
SMCHD1-201ENST00000320876 PDAP1Q13442 181 aaKnown RBP17.72■□□□□ 0.43
SMCHD1-201ENST00000320876 LRRC1Q9BTT6 524 aa17.72■□□□□ 0.43
SMCHD1-201ENST00000320876 CASZ1Q86V15 1759 aa17.72■□□□□ 0.43
SMCHD1-201ENST00000320876 SAMD9Q5K651 1589 aa17.72■□□□□ 0.43
SMCHD1-201ENST00000320876 MAGEA13PA6NCF6 341 aa17.72■□□□□ 0.43
SMCHD1-201ENST00000320876 PSMD3O43242 534 aa17.72■□□□□ 0.43
SMCHD1-201ENST00000320876 SUPT20HL1Q3ZLR7 823 aa17.72■□□□□ 0.43
SMCHD1-201ENST00000320876 AFF4Q9UHB7 1163 aaKnown RBP17.72■□□□□ 0.43
SMCHD1-201ENST00000320876 IGF2BP3O00425 579 aaKnown RBP eCLIP17.72■□□□□ 0.43
SMCHD1-201ENST00000320876 FAM98CQ17RN3 349 aaKnown RBP17.72■□□□□ 0.43
SMCHD1-201ENST00000320876 E7ENQ6 273 aa17.71■□□□□ 0.43
SMCHD1-201ENST00000320876 XPO1O14980 1071 aaKnown RBP17.71■□□□□ 0.43
SMCHD1-201ENST00000320876 CYTH3O43739 400 aa17.71■□□□□ 0.43
SMCHD1-201ENST00000320876 DYNLL1P63167 89 aaKnown RBP17.71■□□□□ 0.43
SMCHD1-201ENST00000320876 DIS3LQ8TF46 1054 aaKnown RBP17.71■□□□□ 0.43
SMCHD1-201ENST00000320876 NSL1Q96IY1 281 aa17.71■□□□□ 0.43
SMCHD1-201ENST00000320876 DHX35Q9H5Z1 703 aaKnown RBP17.71■□□□□ 0.43
SMCHD1-201ENST00000320876 TBC1D22BQ9NU19 505 aa17.71■□□□□ 0.43
SMCHD1-201ENST00000320876 NDUFA13Q9P0J0 144 aa17.71■□□□□ 0.43
SMCHD1-201ENST00000320876 DCDC2Q9UHG0 476 aa17.71■□□□□ 0.43
SMCHD1-201ENST00000320876 PHF20L1A8MW92 1017 aa17.71■□□□□ 0.43
SMCHD1-201ENST00000320876 UBTFL6P0CB48 400 aaPredicted RBP17.71■□□□□ 0.43
SMCHD1-201ENST00000320876 RASGRF1Q13972 1273 aa17.71■□□□□ 0.43
SMCHD1-201ENST00000320876 FASTKD5Q7L8L6 764 aaKnown RBP17.71■□□□□ 0.43
SMCHD1-201ENST00000320876 ARHGEF26Q96DR7 871 aa17.71■□□□□ 0.43
SMCHD1-201ENST00000320876 SENP7Q9BQF6 1050 aa17.71■□□□□ 0.43
SMCHD1-201ENST00000320876 SFNP31947 248 aa17.71■□□□□ 0.43
SMCHD1-201ENST00000320876 ANO4Q32M45 955 aa17.71■□□□□ 0.43
SMCHD1-201ENST00000320876 RASGRP2Q7LDG7 609 aa17.71■□□□□ 0.43
SMCHD1-201ENST00000320876 FGD2Q7Z6J4 655 aa17.71■□□□□ 0.43
SMCHD1-201ENST00000320876 BBS7Q8IWZ6 715 aa17.71■□□□□ 0.43
SMCHD1-201ENST00000320876 TRPM1Q7Z4N2 1603 aa17.71■□□□□ 0.43
SMCHD1-201ENST00000320876 CTCFP49711 727 aaPredicted RBP17.71■□□□□ 0.43
SMCHD1-201ENST00000320876 FAM213AQ9BRX8 229 aa17.71■□□□□ 0.43
SMCHD1-201ENST00000320876 LONRF1Q17RB8 773 aa17.71■□□□□ 0.43
SMCHD1-201ENST00000320876 FOPNLQ96NB1 174 aa17.71■□□□□ 0.43
SMCHD1-201ENST00000320876 GGT7Q9UJ14 662 aa17.71■□□□□ 0.43
SMCHD1-201ENST00000320876 PCDHB8Q9UN66 801 aa17.71■□□□□ 0.43
SMCHD1-201ENST00000320876 CLASP2O75122 1294 aaKnown RBP17.71■□□□□ 0.43
SMCHD1-201ENST00000320876 ARMCX4Q5H9R4 360 aa17.71■□□□□ 0.43
SMCHD1-201ENST00000320876 LVRNQ6Q4G3 990 aa17.71■□□□□ 0.43
SMCHD1-201ENST00000320876 TRIM66O15016 1216 aa17.71■□□□□ 0.42
SMCHD1-201ENST00000320876 SLC16A3O15427 465 aaKnown RBP17.71■□□□□ 0.42
SMCHD1-201ENST00000320876 CDK8P49336 464 aa17.71■□□□□ 0.42
SMCHD1-201ENST00000320876 COPAP53621 1224 aa17.71■□□□□ 0.42
SMCHD1-201ENST00000320876 ZNF235Q14590 738 aa17.71■□□□□ 0.42
SMCHD1-201ENST00000320876 CCDC144BQ3MJ40 725 aa17.71■□□□□ 0.42
SMCHD1-201ENST00000320876 KRCC1Q9NPI7 259 aaPredicted RBP17.71■□□□□ 0.42
SMCHD1-201ENST00000320876 AIM2O14862 343 aa17.7■□□□□ 0.42
SMCHD1-201ENST00000320876 CAND2O75155 1236 aa17.7■□□□□ 0.42
SMCHD1-201ENST00000320876 PTPRN2Q92932 1015 aa17.7■□□□□ 0.42
SMCHD1-201ENST00000320876 PPP1R16BQ96T49 567 aa17.7■□□□□ 0.42
SMCHD1-201ENST00000320876 COQ7Q99807 217 aa17.7■□□□□ 0.42
SMCHD1-201ENST00000320876 INTS2Q9H0H0 1204 aaKnown RBP17.7■□□□□ 0.42
SMCHD1-201ENST00000320876 TET3O43151 1660 aa17.7■□□□□ 0.42
SMCHD1-201ENST00000320876 PLEKHA8P1O95397 391 aa17.7■□□□□ 0.42
SMCHD1-201ENST00000320876 APOA4P06727 396 aa17.7■□□□□ 0.42
SMCHD1-201ENST00000320876 CORO7P57737 925 aa17.7■□□□□ 0.42
SMCHD1-201ENST00000320876 ZNF746Q6NUN9 644 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms