RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 EP400NLQ6ZTU2 488 aa8.17□□□□□ -1.1
TRIM55-202ENST00000315962 NOP9Q86U38 636 aaKnown RBP8.17□□□□□ -1.1
TRIM55-202ENST00000315962 SLC9A9Q8IVB4 645 aa8.17□□□□□ -1.1
TRIM55-202ENST00000315962 C2orf69Q8N8R5 385 aa8.17□□□□□ -1.1
TRIM55-202ENST00000315962 SLC35G2Q8TBE7 412 aa8.17□□□□□ -1.1
TRIM55-202ENST00000315962 PIK3R5Q8WYR1 880 aa8.17□□□□□ -1.1
TRIM55-202ENST00000315962 CPB2Q96IY4 423 aa8.17□□□□□ -1.1
TRIM55-202ENST00000315962 PCDHB18PQ96TA0 734 aa8.17□□□□□ -1.1
TRIM55-202ENST00000315962 SH3GL2Q99962 352 aa8.17□□□□□ -1.1
TRIM55-202ENST00000315962 CELF4Q9BZC1 486 aaKnown RBP8.17□□□□□ -1.1
TRIM55-202ENST00000315962 NUCKS1Q9H1E3 243 aaKnown RBP8.17□□□□□ -1.1
TRIM55-202ENST00000315962 SUCLA2Q9P2R7 463 aaPredicted RBP8.17□□□□□ -1.1
TRIM55-202ENST00000315962 MYH11P35749 1972 aa8.17□□□□□ -1.1
TRIM55-202ENST00000315962 PAPPA2Q9BXP8 1791 aa8.17□□□□□ -1.1
TRIM55-202ENST00000315962 KIAA1217Q5T5P2 1943 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 GOLGA8KD6RF30 607 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 CEP104O60308 925 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 OPA1O60313 960 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 STAM2O75886 525 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 LCA5LO95447 670 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 ITGA4P13612 1032 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 TUBB4BP68371 445 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 QPCTQ16769 361 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 ODF2Q5BJF6 829 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 TDRD10Q5VZ19 366 aaKnown RBP8.16□□□□□ -1.1
TRIM55-202ENST00000315962 CCDC62Q6P9F0 684 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 SCARA5Q6ZMJ2 495 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 GPR142Q7Z601 462 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 MSL3Q8N5Y2 521 aaKnown RBP8.16□□□□□ -1.1
TRIM55-202ENST00000315962 FBXL13Q8NEE6 735 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 RDM1Q8NG50 284 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 ZNF473Q8WTR7 871 aaKnown RBP8.16□□□□□ -1.1
TRIM55-202ENST00000315962 UBLCP1Q8WVY7 318 aaPredicted RBP8.16□□□□□ -1.1
TRIM55-202ENST00000315962 CPA5Q8WXQ8 436 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 SYN2Q92777 582 aaPredicted RBP8.16□□□□□ -1.1
TRIM55-202ENST00000315962 RPGRIP1Q96KN7 1286 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 CEP89Q96ST8 783 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 TSGA10Q9BZW7 698 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 FAM49AQ9H0Q0 323 aaPredicted RBP8.16□□□□□ -1.1
TRIM55-202ENST00000315962 AKT3Q9Y243 479 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 CDH23Q9H251 3354 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 DYNC1LI2O43237 492 aaPredicted RBP8.16□□□□□ -1.1
TRIM55-202ENST00000315962 SNAI1O95863 264 aaPredicted RBP8.16□□□□□ -1.1
TRIM55-202ENST00000315962 KRT19P08727 400 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 H2AFZP0C0S5 128 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 CETPP11597 493 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 TCP1P17987 556 aaKnown RBP8.16□□□□□ -1.1
TRIM55-202ENST00000315962 CYP2B6P20813 491 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 ARL2P36404 184 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 TFAMQ00059 246 aaKnown RBP8.16□□□□□ -1.1
TRIM55-202ENST00000315962 TTLL4Q14679 1199 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 E2F5Q15329 346 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 CFAP221Q4G0U5 840 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 FAM160B1Q5W0V3 765 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 H2AFVQ71UI9 128 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 DPH6Q7L8W6 267 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 NPLOC4Q8TAT6 608 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 MDM1Q8TC05 714 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 EDEM3Q9BZQ6 932 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 TRIM7Q9C029 511 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 MTMR12Q9C0I1 747 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 COG5Q9UP83 839 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 A0A087WZ62 844 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 IGKV6D-21A0A0A0MT36 114 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 BUB1BO60566 1050 aaPredicted RBP8.16□□□□□ -1.1
TRIM55-202ENST00000315962 DKC1O60832 514 aaKnown RBP eCLIP8.16□□□□□ -1.1
TRIM55-202ENST00000315962 GJB6O95452 261 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 WEE2P0C1S8 567 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 TGFB3P10600 412 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 TARBP2Q15633 366 aaKnown RBP8.16□□□□□ -1.1
TRIM55-202ENST00000315962 UBAP2Q5T6F2 1119 aaKnown RBP8.16□□□□□ -1.1
TRIM55-202ENST00000315962 TAPT1Q6NXT6 567 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 VPS36Q86VN1 386 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 CEP57Q86XR8 500 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 SPIRE2Q8WWL2 714 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 PSPC1Q8WXF1 523 aaKnown RBP8.16□□□□□ -1.1
TRIM55-202ENST00000315962 FDXACB1Q9BRP7 624 aaPredicted RBP8.16□□□□□ -1.1
TRIM55-202ENST00000315962 MROH8Q9H579 483 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 SETD4Q9NVD3 440 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.16□□□□□ -1.1
TRIM55-202ENST00000315962 GGT7Q9UJ14 662 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 MCM3APO60318 1980 aa8.16□□□□□ -1.1
TRIM55-202ENST00000315962 GTPBP10A4D1E9 387 aaKnown RBP8.15□□□□□ -1.1
TRIM55-202ENST00000315962 IGF2BP3O00425 579 aaKnown RBP eCLIP8.15□□□□□ -1.1
TRIM55-202ENST00000315962 GRIN3BO60391 1043 aa8.15□□□□□ -1.1
TRIM55-202ENST00000315962 FERP16591 822 aa8.15□□□□□ -1.1
TRIM55-202ENST00000315962 SMPD1P17405 629 aa8.15□□□□□ -1.1
TRIM55-202ENST00000315962 PIK3CAP42336 1068 aa8.15□□□□□ -1.1
TRIM55-202ENST00000315962 GTF2A2P52657 109 aa8.15□□□□□ -1.1
TRIM55-202ENST00000315962 KIZQ2M2Z5 673 aa8.15□□□□□ -1.1
TRIM55-202ENST00000315962 SPRYD7Q5W111 196 aa8.15□□□□□ -1.1
TRIM55-202ENST00000315962 EEF1DP3Q658K8 133 aa8.15□□□□□ -1.1
TRIM55-202ENST00000315962 TMEM270Q6UE05 265 aa8.15□□□□□ -1.1
TRIM55-202ENST00000315962 OLIG1Q8TAK6 271 aa8.15□□□□□ -1.1
TRIM55-202ENST00000315962 HELQQ8TDG4 1101 aa8.15□□□□□ -1.1
TRIM55-202ENST00000315962 SCFD2Q8WU76 684 aa8.15□□□□□ -1.1
TRIM55-202ENST00000315962 IQCDQ96DY2 449 aa8.15□□□□□ -1.1
TRIM55-202ENST00000315962 CCT8L2Q96SF2 557 aa8.15□□□□□ -1.1
TRIM55-202ENST00000315962 AGPAT1Q99943 283 aa8.15□□□□□ -1.1
TRIM55-202ENST00000315962 CXCL16Q9H2A7 254 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms