RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 MAP1BP46821 2468 aaKnown RBP8.81□□□□□ -1
PCDHB1-201ENST00000306549 SLIT2O94813 1529 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 PLA2G6O60733 806 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 ODC1P11926 461 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 SREBF1P36956 1147 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 NAMPTP43490 491 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 KPNA1P52294 538 aaPredicted RBP8.81□□□□□ -1
PCDHB1-201ENST00000306549 BLVRAP53004 296 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 CDK17Q00537 523 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 FLOT2Q14254 428 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 GIMAP4Q9NUV9 329 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 SENP1Q9P0U3 644 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 CRYBG1Q9Y4K1 1723 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 LTBP3Q9NS15 1303 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 GOLGA8JA6NMD2 632 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 PRKCBP05771 671 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 RAG1P15918 1043 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 ACCSLQ4AC99 568 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 MAGOHBQ96A72 148 aaKnown RBP8.81□□□□□ -1
PCDHB1-201ENST00000306549 PAGE5Q96GU1 130 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 TJP2Q9UDY2 1190 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 TM4SF1P30408 202 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 DSG3P32926 999 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 BASP1P80723 227 aaKnown RBP8.81□□□□□ -1
PCDHB1-201ENST00000306549 TRIM60Q495X7 471 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 ZNF410Q86VK4 478 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 USP38Q8NB14 1042 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 PIGOQ8TEQ8 1089 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 ANKS1AQ92625 1134 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 SUDS3Q9H7L9 328 aaPredicted RBP8.81□□□□□ -1
PCDHB1-201ENST00000306549 CEP72Q9P209 647 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 PCDHGB4Q9UN71 923 aa8.81□□□□□ -1
PCDHB1-201ENST00000306549 GLTPD2A6NH11 291 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 MT-ND3P03897 115 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 CAPZA2P47755 286 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 SKOR1P84550 965 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 PTPAQ15257 358 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 METTL7BQ6UX53 244 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 SPATA2LQ8IUW3 424 aaPredicted RBP8.8□□□□□ -1
PCDHB1-201ENST00000306549 KIRREL3Q8IZU9 778 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 ANKRD13CQ8N6S4 541 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 AFG1LQ8WV93 481 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 DDX56Q9NY93 547 aaKnown RBP8.8□□□□□ -1
PCDHB1-201ENST00000306549 INPP5FQ9Y2H2 1132 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 COBLO75128 1261 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 CDC27P30260 824 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 GTF2H1P32780 548 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 HSD17B4P51659 736 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 SP3Q02447 781 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 ILF2Q12905 390 aaKnown RBP8.8□□□□□ -1
PCDHB1-201ENST00000306549 MMS22LQ6ZRQ5 1243 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 SCN4BQ8IWT1 228 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 RABGGTAQ92696 567 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 NAF1Q96HR8 494 aaKnown RBP8.8□□□□□ -1
PCDHB1-201ENST00000306549 WDR18Q9BV38 432 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 IQANK1A0A1B0GTG1 560 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 PDHXO00330 501 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 PRRG1O14668 218 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 PSMD3O43242 534 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 MAP3K7CLP57077 242 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 CAV1Q03135 178 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 RGMBQ6NW40 437 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 ZNF677Q86XU0 584 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 XPO4Q9C0E2 1151 aaKnown RBP8.8□□□□□ -1
PCDHB1-201ENST00000306549 KLC2Q9H0B6 622 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 FAM96AQ9H5X1 160 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 FIS1Q9Y3D6 152 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 SLC15A5A6NIM6 579 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 E2F6O75461 281 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 OXCT1P55809 520 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 TOB2Q14106 344 aaPredicted RBP8.8□□□□□ -1
PCDHB1-201ENST00000306549 PDCD6IPQ8WUM4 868 aaKnown RBP8.8□□□□□ -1
PCDHB1-201ENST00000306549 ZFP42Q96MM3 310 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 KIF17Q9P2E2 1029 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 L3MBTL1Q9Y468 752 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 PCDHB6Q9Y5E3 794 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 COPG1Q9Y678 874 aaKnown RBP8.8□□□□□ -1
PCDHB1-201ENST00000306549 CPB1P15086 417 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 THEMIS2Q5TEJ8 643 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 ITIH5Q86UX2 942 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 UCMAQ8WVF2 138 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 C7orf25Q9BPX7 421 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 UTP6Q9NYH9 597 aaKnown RBP8.8□□□□□ -1
PCDHB1-201ENST00000306549 SCOCQ9UIL1 159 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 NUP188Q5SRE5 1749 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 ECEL1O95672 775 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 SESN3P58005 492 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 TRIM68Q6AZZ1 485 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 ITPRIPL1Q6GPH6 555 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 STAMQ92783 540 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 KCNQ5Q9NR82 932 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 COL1A1P02452 1464 aaPredicted RBP8.8□□□□□ -1
PCDHB1-201ENST00000306549 MTSS1O43312 755 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 MAPTP10636 758 aaKnown RBP8.8□□□□□ -1
PCDHB1-201ENST00000306549 NFE2Q16621 373 aaPredicted RBP8.8□□□□□ -1
PCDHB1-201ENST00000306549 RASIP1Q5U651 963 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 BTBD8Q5XKL5 378 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 SHCBP1Q8NEM2 672 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 TTC8Q8TAM2 541 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 DYDC2Q96IM9 177 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms