RNA–Protein interactions for RNA: ENST00000305699.15

FANCA-201, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 1,430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-201ENST00000305699 ABLIM1O14639 778 aa17.07■□□□□ 0.32
FANCA-201ENST00000305699 CLDN3O15551 220 aa17.07■□□□□ 0.32
FANCA-201ENST00000305699 TRAPPC3O43617 180 aa17.07■□□□□ 0.32
FANCA-201ENST00000305699 SYT1P21579 422 aa17.07■□□□□ 0.32
FANCA-201ENST00000305699 MARCKSP29966 332 aaPredicted RBP17.07■□□□□ 0.32
FANCA-201ENST00000305699 GBP2P32456 591 aaPredicted RBP17.07■□□□□ 0.32
FANCA-201ENST00000305699 UPP1Q16831 310 aa17.07■□□□□ 0.32
FANCA-201ENST00000305699 SEZ6Q53EL9 994 aa17.07■□□□□ 0.32
FANCA-201ENST00000305699 XKR4Q5GH76 650 aa17.07■□□□□ 0.32
FANCA-201ENST00000305699 LIN9Q5TKA1 542 aa17.07■□□□□ 0.32
FANCA-201ENST00000305699 LILRA6Q6PI73 481 aa17.07■□□□□ 0.32
FANCA-201ENST00000305699 ALKAL1Q6UXT8 129 aa17.07■□□□□ 0.32
FANCA-201ENST00000305699 ZPBP2Q6X784 338 aa17.07■□□□□ 0.32
FANCA-201ENST00000305699 HAUS6Q7Z4H7 955 aa17.07■□□□□ 0.32
FANCA-201ENST00000305699 FBXL6Q8N531 539 aa17.07■□□□□ 0.32
FANCA-201ENST00000305699 RAD54LQ92698 747 aa17.07■□□□□ 0.32
FANCA-201ENST00000305699 STAMQ92783 540 aa17.07■□□□□ 0.32
FANCA-201ENST00000305699 ASIC4Q96FT7 647 aa17.07■□□□□ 0.32
FANCA-201ENST00000305699 CLSTN3Q9BQT9 956 aa17.07■□□□□ 0.32
FANCA-201ENST00000305699 WDR6Q9NNW5 1121 aaKnown RBP17.07■□□□□ 0.32
FANCA-201ENST00000305699 BLOC1S4Q9NUP1 217 aa17.07■□□□□ 0.32
FANCA-201ENST00000305699 ZDHHC7Q9NXF8 308 aa17.07■□□□□ 0.32
FANCA-201ENST00000305699 VWA8A3KMH1 1905 aa17.07■□□□□ 0.32
FANCA-201ENST00000305699 ZDBF2Q9HCK1 2354 aa17.07■□□□□ 0.32
FANCA-201ENST00000305699 K7ENM7 598 aa17.06■□□□□ 0.32
FANCA-201ENST00000305699 TBCAO75347 108 aaKnown RBP17.06■□□□□ 0.32
FANCA-201ENST00000305699 KCNE1P15382 129 aa17.06■□□□□ 0.32
FANCA-201ENST00000305699 FGFR3P22607 806 aa17.06■□□□□ 0.32
FANCA-201ENST00000305699 IGFBP6P24592 240 aaPredicted RBP17.06■□□□□ 0.32
FANCA-201ENST00000305699 NCKAP1LP55160 1127 aa17.06■□□□□ 0.32
FANCA-201ENST00000305699 CEBPZQ03701 1054 aaKnown RBP17.06■□□□□ 0.32
FANCA-201ENST00000305699 SOX4Q06945 474 aaPredicted RBP17.06■□□□□ 0.32
FANCA-201ENST00000305699 SPECC1Q5M775 1068 aa17.06■□□□□ 0.32
FANCA-201ENST00000305699 LRRC15Q8TF66 581 aa17.06■□□□□ 0.32
FANCA-201ENST00000305699 LARP4BQ92615 738 aaKnown RBP17.06■□□□□ 0.32
FANCA-201ENST00000305699 ZNF707Q96C28 371 aaPredicted RBP17.06■□□□□ 0.32
FANCA-201ENST00000305699 DDX27Q96GQ7 796 aaKnown RBP17.06■□□□□ 0.32
FANCA-201ENST00000305699 ZMAT2Q96NC0 199 aaKnown RBP17.06■□□□□ 0.32
FANCA-201ENST00000305699 SMOC2Q9H3U7 446 aa17.06■□□□□ 0.32
FANCA-201ENST00000305699 PARVGQ9HBI0 331 aa17.06■□□□□ 0.32
FANCA-201ENST00000305699 FBXW11Q9UKB1 542 aa17.06■□□□□ 0.32
FANCA-201ENST00000305699 PODXLO00592 558 aa17.05■□□□□ 0.32
FANCA-201ENST00000305699 ZMYND10O75800 440 aa17.05■□□□□ 0.32
FANCA-201ENST00000305699 TKTP29401 623 aaKnown RBP17.05■□□□□ 0.32
FANCA-201ENST00000305699 BRCC3P46736 316 aa17.05■□□□□ 0.32
FANCA-201ENST00000305699 LIG4P49917 911 aa17.05■□□□□ 0.32
FANCA-201ENST00000305699 RESTQ13127 1097 aa17.05■□□□□ 0.32
FANCA-201ENST00000305699 FAM173BQ6P4H8 233 aa17.05■□□□□ 0.32
FANCA-201ENST00000305699 C3orf58Q8NDZ4 430 aa17.05■□□□□ 0.32
FANCA-201ENST00000305699 C18orf25Q96B23 403 aaPredicted RBP17.05■□□□□ 0.32
FANCA-201ENST00000305699 INTS4Q96HW7 963 aaKnown RBP17.05■□□□□ 0.32
FANCA-201ENST00000305699 EPSTI1Q96J88 318 aa17.05■□□□□ 0.32
FANCA-201ENST00000305699 RHOBTB2Q9BYZ6 727 aa17.05■□□□□ 0.32
FANCA-201ENST00000305699 PRKD2Q9BZL6 878 aa17.05■□□□□ 0.32
FANCA-201ENST00000305699 CNTN3Q9P232 1028 aa17.05■□□□□ 0.32
FANCA-201ENST00000305699 NUB1Q9Y5A7 615 aa17.05■□□□□ 0.32
FANCA-201ENST00000305699 K7ELQ4 463 aaPredicted RBP17.04■□□□□ 0.32
FANCA-201ENST00000305699 HNRNPDLO14979 420 aaKnown RBP17.04■□□□□ 0.32
FANCA-201ENST00000305699 ADAM12O43184 909 aa17.04■□□□□ 0.32
FANCA-201ENST00000305699 OR1D2P34982 312 aa17.04■□□□□ 0.32
FANCA-201ENST00000305699 MCL1Q07820 350 aa17.04■□□□□ 0.32
FANCA-201ENST00000305699 PTPAQ15257 358 aa17.04■□□□□ 0.32
FANCA-201ENST00000305699 PPM1LQ5SGD2 360 aa17.04■□□□□ 0.32
FANCA-201ENST00000305699 CD300LGQ6UXG3 332 aa17.04■□□□□ 0.32
FANCA-201ENST00000305699 CCSER1Q9C0I3 900 aa17.04■□□□□ 0.32
FANCA-201ENST00000305699 KCNH6Q9H252 994 aa17.04■□□□□ 0.32
FANCA-201ENST00000305699 CDY1Q9Y6F8 540 aa17.04■□□□□ 0.32
FANCA-201ENST00000305699 TRAK2O60296 914 aa17.04■□□□□ 0.32
FANCA-201ENST00000305699 PDGFBP01127 241 aaPredicted RBP17.04■□□□□ 0.32
FANCA-201ENST00000305699 C8AP07357 584 aa17.04■□□□□ 0.32
FANCA-201ENST00000305699 CLTAP09496 248 aa17.04■□□□□ 0.32
FANCA-201ENST00000305699 CXCL8P10145 99 aa17.04■□□□□ 0.32
FANCA-201ENST00000305699 TXLNAP40222 546 aa17.04■□□□□ 0.32
FANCA-201ENST00000305699 ZNF131P52739 623 aa17.04■□□□□ 0.32
FANCA-201ENST00000305699 RAB33AQ14088 237 aa17.04■□□□□ 0.32
FANCA-201ENST00000305699 SLC10A6Q3KNW5 377 aa17.04■□□□□ 0.32
FANCA-201ENST00000305699 ANKS3Q6ZW76 656 aa17.04■□□□□ 0.32
FANCA-201ENST00000305699 USP49Q70CQ1 688 aa17.04■□□□□ 0.32
FANCA-201ENST00000305699 GET4Q7L5D6 327 aaPredicted RBP17.04■□□□□ 0.32
FANCA-201ENST00000305699 KCNK12Q9HB15 430 aa17.04■□□□□ 0.32
FANCA-201ENST00000305699 MTRRQ9UBK8 725 aa17.04■□□□□ 0.32
FANCA-201ENST00000305699 CCDC39Q9UFE4 941 aa17.04■□□□□ 0.32
FANCA-201ENST00000305699 FBXO2Q9UK22 296 aaPredicted RBP17.04■□□□□ 0.32
FANCA-201ENST00000305699 TBX20Q9UMR3 447 aa17.04■□□□□ 0.32
FANCA-201ENST00000305699 POLIQ9UNA4 740 aa17.04■□□□□ 0.32
FANCA-201ENST00000305699 CCL16O15467 120 aa17.03■□□□□ 0.32
FANCA-201ENST00000305699 MEFVO15553 781 aaPredicted RBP17.03■□□□□ 0.32
FANCA-201ENST00000305699 N4BP1O75113 896 aaKnown RBP17.03■□□□□ 0.32
FANCA-201ENST00000305699 HNRNPA1P09651 372 aaKnown RBP eCLIP17.03■□□□□ 0.32
FANCA-201ENST00000305699 SCP2P22307 547 aa17.03■□□□□ 0.32
FANCA-201ENST00000305699 RPL9P32969 192 aaKnown RBP17.03■□□□□ 0.32
FANCA-201ENST00000305699 DDIT3P35638 169 aa17.03■□□□□ 0.32
FANCA-201ENST00000305699 TDGQ13569 410 aa17.03■□□□□ 0.32
FANCA-201ENST00000305699 KRI1Q8N9T8 703 aaKnown RBP17.03■□□□□ 0.32
FANCA-201ENST00000305699 SLC7A14Q8TBB6 771 aa17.03■□□□□ 0.32
FANCA-201ENST00000305699 CLIC6Q96NY7 704 aa17.03■□□□□ 0.32
FANCA-201ENST00000305699 MYADMQ96S97 322 aa17.03■□□□□ 0.32
FANCA-201ENST00000305699 HAPLN2Q9GZV7 340 aa17.03■□□□□ 0.32
FANCA-201ENST00000305699 MTMR6Q9Y217 621 aa17.03■□□□□ 0.32
FANCA-201ENST00000305699 SRPRBQ9Y5M8 271 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms