RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.63■□□□□ 0.25
USP43-201ENST00000285199 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.63■□□□□ 0.25
USP43-201ENST00000285199 PDE4DIPQ5VU43 2346 aa16.63■□□□□ 0.25
USP43-201ENST00000285199 GRIN2DO15399 1336 aa16.63■□□□□ 0.25
USP43-201ENST00000285199 FRMPD1Q5SYB0 1578 aa16.63■□□□□ 0.25
USP43-201ENST00000285199 KRT16P08779 473 aa16.63■□□□□ 0.25
USP43-201ENST00000285199 WDR75Q8IWA0 830 aaKnown RBP16.63■□□□□ 0.25
USP43-201ENST00000285199 MSL3Q8N5Y2 521 aaKnown RBP16.63■□□□□ 0.25
USP43-201ENST00000285199 PRPF31Q8WWY3 499 aaKnown RBP16.63■□□□□ 0.25
USP43-201ENST00000285199 ARHGEF1Q92888 912 aaKnown RBP16.63■□□□□ 0.25
USP43-201ENST00000285199 TRIM11Q96F44 468 aa16.63■□□□□ 0.25
USP43-201ENST00000285199 FAM111AQ96PZ2 611 aa16.63■□□□□ 0.25
USP43-201ENST00000285199 ARMCX1Q9P291 453 aa16.63■□□□□ 0.25
USP43-201ENST00000285199 SLC9A2Q9UBY0 812 aa16.63■□□□□ 0.25
USP43-201ENST00000285199 GRIK5Q16478 980 aa16.62■□□□□ 0.25
USP43-201ENST00000285199 ERMARDQ5T6L9 678 aa16.62■□□□□ 0.25
USP43-201ENST00000285199 KRT80Q6KB66 452 aa16.62■□□□□ 0.25
USP43-201ENST00000285199 SESTD1Q86VW0 696 aa16.62■□□□□ 0.25
USP43-201ENST00000285199 C10orf88Q9H8K7 445 aa16.62■□□□□ 0.25
USP43-201ENST00000285199 CCDC22O60826 627 aa16.62■□□□□ 0.25
USP43-201ENST00000285199 GJB6O95452 261 aa16.62■□□□□ 0.25
USP43-201ENST00000285199 LMNAP02545 664 aaKnown RBP16.62■□□□□ 0.25
USP43-201ENST00000285199 SOX11P35716 441 aa16.62■□□□□ 0.25
USP43-201ENST00000285199 RFC5P40937 340 aa16.62■□□□□ 0.25
USP43-201ENST00000285199 PPATQ06203 517 aa16.62■□□□□ 0.25
USP43-201ENST00000285199 CBWD2Q8IUF1 395 aa16.62■□□□□ 0.25
USP43-201ENST00000285199 DEPDC1BQ8WUY9 529 aa16.62■□□□□ 0.25
USP43-201ENST00000285199 SLC35C1Q96A29 364 aa16.62■□□□□ 0.25
USP43-201ENST00000285199 MTBPQ96DY7 904 aa16.62■□□□□ 0.25
USP43-201ENST00000285199 MMTAG2Q9BU76 263 aaKnown RBP16.62■□□□□ 0.25
USP43-201ENST00000285199 MSTO1Q9BUK6 570 aa16.62■□□□□ 0.25
USP43-201ENST00000285199 TOPORSQ9NS56 1045 aaPredicted RBP16.62■□□□□ 0.25
USP43-201ENST00000285199 SNX3O60493 162 aa16.62■□□□□ 0.25
USP43-201ENST00000285199 SHOX2O60902 331 aaPredicted RBP16.62■□□□□ 0.25
USP43-201ENST00000285199 ITIH4Q14624 930 aa16.62■□□□□ 0.25
USP43-201ENST00000285199 TRIP10Q15642 601 aa16.62■□□□□ 0.25
USP43-201ENST00000285199 KCNT1Q5JUK3 1230 aa16.62■□□□□ 0.25
USP43-201ENST00000285199 LRGUKQ96M69 825 aa16.62■□□□□ 0.25
USP43-201ENST00000285199 DDX50Q9BQ39 737 aaKnown RBP16.62■□□□□ 0.25
USP43-201ENST00000285199 CDCA7Q9BWT1 371 aaPredicted RBP16.62■□□□□ 0.25
USP43-201ENST00000285199 APOBEC2Q9Y235 224 aaKnown RBP16.62■□□□□ 0.25
USP43-201ENST00000285199 PFASO15067 1338 aa16.62■□□□□ 0.25
USP43-201ENST00000285199 MYH10P35580 1976 aa16.61■□□□□ 0.25
USP43-201ENST00000285199 GH1P01241 217 aa16.61■□□□□ 0.25
USP43-201ENST00000285199 CREB1P16220 341 aa16.61■□□□□ 0.25
USP43-201ENST00000285199 RRM1P23921 792 aa16.61■□□□□ 0.25
USP43-201ENST00000285199 CHST7Q9NS84 486 aa16.61■□□□□ 0.25
USP43-201ENST00000285199 GPC4O75487 556 aa16.61■□□□□ 0.25
USP43-201ENST00000285199 ZWINTO95229 277 aa16.61■□□□□ 0.25
USP43-201ENST00000285199 NDUFB10O96000 172 aa16.61■□□□□ 0.25
USP43-201ENST00000285199 TCN1P20061 433 aaPredicted RBP16.61■□□□□ 0.25
USP43-201ENST00000285199 ECE1P42892 770 aa16.61■□□□□ 0.25
USP43-201ENST00000285199 MKRN3Q13064 507 aaKnown RBP16.61■□□□□ 0.25
USP43-201ENST00000285199 CEP55Q53EZ4 464 aa16.61■□□□□ 0.25
USP43-201ENST00000285199 TRIM50Q86XT4 487 aa16.61■□□□□ 0.25
USP43-201ENST00000285199 SLC7A3Q8WY07 619 aa16.61■□□□□ 0.25
USP43-201ENST00000285199 Q9H521 79 aa16.61■□□□□ 0.25
USP43-201ENST00000285199 ERVK-5Q9HDB9 667 aa16.61■□□□□ 0.25
USP43-201ENST00000285199 PPEF1O14829 653 aaPredicted RBP16.61■□□□□ 0.25
USP43-201ENST00000285199 AP2B1P63010 937 aa16.61■□□□□ 0.25
USP43-201ENST00000285199 MTMR1Q13613 665 aa16.61■□□□□ 0.25
USP43-201ENST00000285199 LCA5Q86VQ0 697 aa16.61■□□□□ 0.25
USP43-201ENST00000285199 SULF1Q8IWU6 871 aa16.61■□□□□ 0.25
USP43-201ENST00000285199 ATP11CQ8NB49 1132 aa16.61■□□□□ 0.25
USP43-201ENST00000285199 RAVER2Q9HCJ3 691 aaKnown RBP16.61■□□□□ 0.25
USP43-201ENST00000285199 MSH4O15457 936 aa16.6■□□□□ 0.25
USP43-201ENST00000285199 APRTP07741 180 aa16.6■□□□□ 0.25
USP43-201ENST00000285199 CAV1Q03135 178 aa16.6■□□□□ 0.25
USP43-201ENST00000285199 IFRD2Q12894 506 aaPredicted RBP16.6■□□□□ 0.25
USP43-201ENST00000285199 CUL3Q13618 768 aa16.6■□□□□ 0.25
USP43-201ENST00000285199 SNRNP35Q16560 246 aaKnown RBP16.6■□□□□ 0.25
USP43-201ENST00000285199 ECM1Q16610 540 aa16.6■□□□□ 0.25
USP43-201ENST00000285199 CBWD6Q4V339 395 aa16.6■□□□□ 0.25
USP43-201ENST00000285199 CBWD3Q5JTY5 395 aa16.6■□□□□ 0.25
USP43-201ENST00000285199 CBWD5Q5RIA9 395 aa16.6■□□□□ 0.25
USP43-201ENST00000285199 C16orf86Q6ZW13 317 aa16.6■□□□□ 0.25
USP43-201ENST00000285199 RNF168Q8IYW5 571 aaPredicted RBP16.6■□□□□ 0.25
USP43-201ENST00000285199 ALG3Q92685 438 aa16.6■□□□□ 0.25
USP43-201ENST00000285199 TMEM150BA6NC51 233 aa16.6■□□□□ 0.25
USP43-201ENST00000285199 GRAP2O75791 330 aa16.6■□□□□ 0.25
USP43-201ENST00000285199 RPS6KA2Q15349 733 aa16.6■□□□□ 0.25
USP43-201ENST00000285199 GALNT4Q8N4A0 578 aa16.6■□□□□ 0.25
USP43-201ENST00000285199 CCDC97Q96F63 343 aaPredicted RBP16.6■□□□□ 0.25
USP43-201ENST00000285199 ROPN1BQ9BZX4 212 aaPredicted RBP16.6■□□□□ 0.25
USP43-201ENST00000285199 ROPN1Q9HAT0 212 aaPredicted RBP16.6■□□□□ 0.25
USP43-201ENST00000285199 SUPT3HO75486 399 aa16.6■□□□□ 0.25
USP43-201ENST00000285199 STK10O94804 968 aaKnown RBP16.6■□□□□ 0.25
USP43-201ENST00000285199 CRKP46108 304 aa16.6■□□□□ 0.25
USP43-201ENST00000285199 SLC12A2P55011 1212 aa16.6■□□□□ 0.25
USP43-201ENST00000285199 MRPS35P82673 323 aaKnown RBP16.6■□□□□ 0.25
USP43-201ENST00000285199 RBM41Q96IZ5 413 aaKnown RBP16.6■□□□□ 0.25
USP43-201ENST00000285199 SERPINB12Q96P63 405 aa16.6■□□□□ 0.25
USP43-201ENST00000285199 MCEEQ96PE7 176 aa16.6■□□□□ 0.25
USP43-201ENST00000285199 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.59■□□□□ 0.25
USP43-201ENST00000285199 NEMP1O14524 444 aa16.59■□□□□ 0.25
USP43-201ENST00000285199 CRCPO75575 148 aa16.59■□□□□ 0.25
USP43-201ENST00000285199 TTC4O95801 387 aa16.59■□□□□ 0.25
USP43-201ENST00000285199 TNNC2P02585 160 aa16.59■□□□□ 0.25
USP43-201ENST00000285199 HNRNPCP07910 306 aaKnown RBP eCLIP16.59■□□□□ 0.25
USP43-201ENST00000285199 ZSCAN5DPP0CG00 497 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms