RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 SYT11Q9BT88 431 aa16.57■□□□□ 0.24
COPS3-201ENST00000268717 INO80BQ9C086 356 aaPredicted RBP16.57■□□□□ 0.24
COPS3-201ENST00000268717 LACRTQ9GZZ8 138 aa16.57■□□□□ 0.24
COPS3-201ENST00000268717 UBE2TQ9NPD8 197 aaPredicted RBP16.57■□□□□ 0.24
COPS3-201ENST00000268717 CPSF3Q9UKF6 684 aaKnown RBP16.57■□□□□ 0.24
COPS3-201ENST00000268717 GUCA1BQ9UMX6 200 aa16.57■□□□□ 0.24
COPS3-201ENST00000268717 LTBP2Q14767 1821 aa16.57■□□□□ 0.24
COPS3-201ENST00000268717 SMIM35A0A1B0GVV1 85 aa16.56■□□□□ 0.24
COPS3-201ENST00000268717 RCCD1A6NED2 376 aa16.56■□□□□ 0.24
COPS3-201ENST00000268717 SMIM10L2AP0DMW4 78 aa16.56■□□□□ 0.24
COPS3-201ENST00000268717 SMIM10L2BP0DMW5 78 aa16.56■□□□□ 0.24
COPS3-201ENST00000268717 ARID5AQ03989 594 aa16.56■□□□□ 0.24
COPS3-201ENST00000268717 MFSD10Q14728 455 aa16.56■□□□□ 0.24
COPS3-201ENST00000268717 AMHR2Q16671 573 aa16.56■□□□□ 0.24
COPS3-201ENST00000268717 KIAA0753Q2KHM9 967 aa16.56■□□□□ 0.24
COPS3-201ENST00000268717 NFRKBQ6P4R8 1299 aa16.56■□□□□ 0.24
COPS3-201ENST00000268717 ARHGEF19Q8IW93 802 aa16.56■□□□□ 0.24
COPS3-201ENST00000268717 KIAA0319LQ8IZA0 1049 aa16.56■□□□□ 0.24
COPS3-201ENST00000268717 LMBR1Q8WVP7 490 aa16.56■□□□□ 0.24
COPS3-201ENST00000268717 SHC3Q92529 594 aa16.56■□□□□ 0.24
COPS3-201ENST00000268717 SEMA4DQ92854 862 aa16.56■□□□□ 0.24
COPS3-201ENST00000268717 SECISBP2LQ93073 1101 aaKnown RBP16.56■□□□□ 0.24
COPS3-201ENST00000268717 POP1Q99575 1024 aaKnown RBP16.56■□□□□ 0.24
COPS3-201ENST00000268717 IRX2Q9BZI1 471 aaPredicted RBP16.56■□□□□ 0.24
COPS3-201ENST00000268717 PRO3102Q9H379 93 aa16.56■□□□□ 0.24
COPS3-201ENST00000268717 TOPORSQ9NS56 1045 aaPredicted RBP16.56■□□□□ 0.24
COPS3-201ENST00000268717 ADAMTS1Q9UHI8 967 aa16.56■□□□□ 0.24
COPS3-201ENST00000268717 INTUQ9ULD6 942 aa16.56■□□□□ 0.24
COPS3-201ENST00000268717 A0A087X0T9 212 aa16.56■□□□□ 0.24
COPS3-201ENST00000268717 ANO9A1A5B4 782 aa16.56■□□□□ 0.24
COPS3-201ENST00000268717 CTAGE9A4FU28 777 aa16.56■□□□□ 0.24
COPS3-201ENST00000268717 TTLL13PA6NNM8 815 aa16.56■□□□□ 0.24
COPS3-201ENST00000268717 FAM228BP0C875 321 aa16.56■□□□□ 0.24
COPS3-201ENST00000268717 MCF2P10911 925 aa16.56■□□□□ 0.24
COPS3-201ENST00000268717 TNNI1P19237 187 aa16.56■□□□□ 0.24
COPS3-201ENST00000268717 HOXC8P31273 242 aa16.56■□□□□ 0.24
COPS3-201ENST00000268717 PSEN2P49810 448 aa16.56■□□□□ 0.24
COPS3-201ENST00000268717 ADAM17P78536 824 aa16.56■□□□□ 0.24
COPS3-201ENST00000268717 NAB2Q15742 525 aa16.56■□□□□ 0.24
COPS3-201ENST00000268717 ZNF568Q3ZCX4 644 aa16.56■□□□□ 0.24
COPS3-201ENST00000268717 SLC35F6Q8N357 371 aa16.56■□□□□ 0.24
COPS3-201ENST00000268717 TRIM58Q8NG06 486 aa16.56■□□□□ 0.24
COPS3-201ENST00000268717 HELQQ8TDG4 1101 aa16.56■□□□□ 0.24
COPS3-201ENST00000268717 NAPGQ99747 312 aaPredicted RBP16.56■□□□□ 0.24
COPS3-201ENST00000268717 TCHPQ9BT92 498 aa16.56■□□□□ 0.24
COPS3-201ENST00000268717 MINDY3Q9H8M7 445 aa16.56■□□□□ 0.24
COPS3-201ENST00000268717 PDE11AQ9HCR9 933 aa16.56■□□□□ 0.24
COPS3-201ENST00000268717 PCDH10Q9P2E7 1040 aa16.56■□□□□ 0.24
COPS3-201ENST00000268717 LAMA3Q16787 3333 aa16.55■□□□□ 0.24
COPS3-201ENST00000268717 SCN10AQ9Y5Y9 1956 aa16.55■□□□□ 0.24
COPS3-201ENST00000268717 A0A087WZ62 844 aa16.55■□□□□ 0.24
COPS3-201ENST00000268717 DYNC1I1O14576 645 aa16.55■□□□□ 0.24
COPS3-201ENST00000268717 CABYRO75952 493 aa16.55■□□□□ 0.24
COPS3-201ENST00000268717 ABL1P00519 1130 aa16.55■□□□□ 0.24
COPS3-201ENST00000268717 TLE2Q04725 743 aa16.55■□□□□ 0.24
COPS3-201ENST00000268717 CXCL17Q6UXB2 119 aa16.55■□□□□ 0.24
COPS3-201ENST00000268717 FAM71AQ8IYT1 594 aa16.55■□□□□ 0.24
COPS3-201ENST00000268717 ZNF516Q92618 1163 aa16.55■□□□□ 0.24
COPS3-201ENST00000268717 GDF15Q99988 308 aa16.55■□□□□ 0.24
COPS3-201ENST00000268717 FDXACB1Q9BRP7 624 aaPredicted RBP16.55■□□□□ 0.24
COPS3-201ENST00000268717 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.55■□□□□ 0.24
COPS3-201ENST00000268717 NAGPAQ9UK23 515 aa16.55■□□□□ 0.24
COPS3-201ENST00000268717 A0A0U1RQG5 324 aaPredicted RBP16.54■□□□□ 0.24
COPS3-201ENST00000268717 FOXN3O00409 490 aaPredicted RBP16.54■□□□□ 0.24
COPS3-201ENST00000268717 PQBP1O60828 265 aaKnown RBP16.54■□□□□ 0.24
COPS3-201ENST00000268717 IL18RAPO95256 599 aa16.54■□□□□ 0.24
COPS3-201ENST00000268717 SLU7O95391 586 aaKnown RBP16.54■□□□□ 0.24
COPS3-201ENST00000268717 MAGEA10P43363 369 aaPredicted RBP16.54■□□□□ 0.24
COPS3-201ENST00000268717 ARHGAP44Q17R89 818 aa16.54■□□□□ 0.24
COPS3-201ENST00000268717 HABP4Q5JVS0 413 aaKnown RBP16.54■□□□□ 0.24
COPS3-201ENST00000268717 ZBTB41Q5SVQ8 909 aa16.54■□□□□ 0.24
COPS3-201ENST00000268717 TDRD10Q5VZ19 366 aaKnown RBP16.54■□□□□ 0.24
COPS3-201ENST00000268717 ALKBH5Q6P6C2 394 aaKnown RBP16.54■□□□□ 0.24
COPS3-201ENST00000268717 ANKRD33Q7Z3H0 272 aa16.54■□□□□ 0.24
COPS3-201ENST00000268717 SLC30A5Q8TAD4 765 aa16.54■□□□□ 0.24
COPS3-201ENST00000268717 OLIG1Q8TAK6 271 aa16.54■□□□□ 0.24
COPS3-201ENST00000268717 NLRP7Q8WX94 980 aa16.54■□□□□ 0.24
COPS3-201ENST00000268717 DHX38Q92620 1227 aaKnown RBP16.54■□□□□ 0.24
COPS3-201ENST00000268717 KREMEN1Q96MU8 473 aa16.54■□□□□ 0.24
COPS3-201ENST00000268717 TOX2Q96NM4 488 aa16.54■□□□□ 0.24
COPS3-201ENST00000268717 CDT1Q9H211 546 aa16.54■□□□□ 0.24
COPS3-201ENST00000268717 C1orf112Q9NSG2 853 aa16.54■□□□□ 0.24
COPS3-201ENST00000268717 SETD4Q9NVD3 440 aa16.54■□□□□ 0.24
COPS3-201ENST00000268717 TRIM10Q9UDY6 481 aa16.54■□□□□ 0.24
COPS3-201ENST00000268717 PRKAG2Q9UGJ0 569 aa16.54■□□□□ 0.24
COPS3-201ENST00000268717 MRFAP1Q9Y605 127 aa16.54■□□□□ 0.24
COPS3-201ENST00000268717 KAT6AQ92794 2004 aa16.53■□□□□ 0.24
COPS3-201ENST00000268717 B4GALT4O60513 344 aa16.53■□□□□ 0.24
COPS3-201ENST00000268717 TACC1O75410 805 aa16.53■□□□□ 0.24
COPS3-201ENST00000268717 URI1O94763 535 aaPredicted RBP16.53■□□□□ 0.24
COPS3-201ENST00000268717 HLA-DRAP01903 254 aa16.53■□□□□ 0.24
COPS3-201ENST00000268717 VTNP04004 478 aa16.53■□□□□ 0.24
COPS3-201ENST00000268717 GNAT1P11488 350 aa16.53■□□□□ 0.24
COPS3-201ENST00000268717 CDK7P50613 346 aa16.53■□□□□ 0.24
COPS3-201ENST00000268717 WDR44Q5JSH3 913 aa16.53■□□□□ 0.24
COPS3-201ENST00000268717 PPM1KQ8N3J5 372 aa16.53■□□□□ 0.24
COPS3-201ENST00000268717 ZNF668Q96K58 619 aaPredicted RBP16.53■□□□□ 0.24
COPS3-201ENST00000268717 ALS2CR12Q96Q35 445 aa16.53■□□□□ 0.24
COPS3-201ENST00000268717 ADAMTS10Q9H324 1103 aa16.53■□□□□ 0.24
COPS3-201ENST00000268717 PTPRJQ12913 1337 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms