RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 DDX23Q9BUQ8 820 aaKnown RBP21.08■□□□□ 0.97
CSPG5-201ENST00000264723 PDGFDQ9GZP0 370 aaPredicted RBP21.08■□□□□ 0.97
CSPG5-201ENST00000264723 EIF3DO15371 548 aaKnown RBP eCLIP21.08■□□□□ 0.96
CSPG5-201ENST00000264723 MYCP01106 439 aaPredicted RBP21.08■□□□□ 0.96
CSPG5-201ENST00000264723 RPL21P46778 160 aaKnown RBP21.08■□□□□ 0.96
CSPG5-201ENST00000264723 ZNF699Q32M78 642 aa21.08■□□□□ 0.96
CSPG5-201ENST00000264723 PDE4DIPQ5VU43 2346 aa21.08■□□□□ 0.96
CSPG5-201ENST00000264723 FDX1P10109 184 aa21.08■□□□□ 0.96
CSPG5-201ENST00000264723 GBP1P32455 592 aa21.08■□□□□ 0.96
CSPG5-201ENST00000264723 COILP38432 576 aaPredicted RBP21.08■□□□□ 0.96
CSPG5-201ENST00000264723 ACTR2P61160 394 aa21.08■□□□□ 0.96
CSPG5-201ENST00000264723 GPS1Q13098 491 aa21.08■□□□□ 0.96
CSPG5-201ENST00000264723 SPOPLQ6IQ16 392 aa21.08■□□□□ 0.96
CSPG5-201ENST00000264723 CATSPER4Q7RTX7 472 aa21.08■□□□□ 0.96
CSPG5-201ENST00000264723 SCYL3Q8IZE3 742 aa21.08■□□□□ 0.96
CSPG5-201ENST00000264723 VPS52Q8N1B4 723 aa21.08■□□□□ 0.96
CSPG5-201ENST00000264723 PWWP2AQ96N64 755 aa21.08■□□□□ 0.96
CSPG5-201ENST00000264723 ERVK-5Q9HDB9 667 aa21.08■□□□□ 0.96
CSPG5-201ENST00000264723 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.08■□□□□ 0.96
CSPG5-201ENST00000264723 CAPN9O14815 690 aa21.07■□□□□ 0.96
CSPG5-201ENST00000264723 LDHAP00338 332 aaKnown RBP21.07■□□□□ 0.96
CSPG5-201ENST00000264723 PGK2P07205 417 aa21.07■□□□□ 0.96
CSPG5-201ENST00000264723 Q4G0T1 1027 aa21.07■□□□□ 0.96
CSPG5-201ENST00000264723 ARHGEF18Q6ZSZ5 1173 aa21.07■□□□□ 0.96
CSPG5-201ENST00000264723 MCUR1Q96AQ8 359 aa21.07■□□□□ 0.96
CSPG5-201ENST00000264723 FOXO6A8MYZ6 492 aa21.07■□□□□ 0.96
CSPG5-201ENST00000264723 GJB6O95452 261 aa21.07■□□□□ 0.96
CSPG5-201ENST00000264723 ITGA8P53708 1063 aa21.07■□□□□ 0.96
CSPG5-201ENST00000264723 KLF6Q99612 283 aaPredicted RBP21.07■□□□□ 0.96
CSPG5-201ENST00000264723 IGSF9BQ9UPX0 1349 aa21.07■□□□□ 0.96
CSPG5-201ENST00000264723 ITGB3BPQ13352 177 aaPredicted RBP21.07■□□□□ 0.96
CSPG5-201ENST00000264723 ASTE1Q2TB18 679 aaPredicted RBP21.07■□□□□ 0.96
CSPG5-201ENST00000264723 ANKRD20A3Q5VUR7 823 aa21.07■□□□□ 0.96
CSPG5-201ENST00000264723 MKNK1Q9BUB5 465 aa21.07■□□□□ 0.96
CSPG5-201ENST00000264723 RALAP11233 206 aa21.06■□□□□ 0.96
CSPG5-201ENST00000264723 IRX4P78413 519 aa21.06■□□□□ 0.96
CSPG5-201ENST00000264723 EPM2AIP1Q7L775 607 aaPredicted RBP21.06■□□□□ 0.96
CSPG5-201ENST00000264723 MKL1Q969V6 931 aa21.06■□□□□ 0.96
CSPG5-201ENST00000264723 TUBGCP6Q96RT7 1819 aa21.06■□□□□ 0.96
CSPG5-201ENST00000264723 INTUQ9ULD6 942 aa21.06■□□□□ 0.96
CSPG5-201ENST00000264723 KRT10P13645 584 aa21.06■□□□□ 0.96
CSPG5-201ENST00000264723 EMC2Q15006 297 aa21.06■□□□□ 0.96
CSPG5-201ENST00000264723 AGBL2Q5U5Z8 902 aa21.06■□□□□ 0.96
CSPG5-201ENST00000264723 LLGL2Q6P1M3 1020 aa21.06■□□□□ 0.96
CSPG5-201ENST00000264723 C1orf186Q6ZWK4 172 aa21.06■□□□□ 0.96
CSPG5-201ENST00000264723 PRUNE1Q86TP1 453 aa21.06■□□□□ 0.96
CSPG5-201ENST00000264723 TRIM11Q96F44 468 aa21.06■□□□□ 0.96
CSPG5-201ENST00000264723 MMP19Q99542 508 aa21.06■□□□□ 0.96
CSPG5-201ENST00000264723 OLFML3Q9NRN5 406 aa21.06■□□□□ 0.96
CSPG5-201ENST00000264723 SLC5A4Q9NY91 659 aa21.06■□□□□ 0.96
CSPG5-201ENST00000264723 C19orf81C9J6K1 198 aa21.06■□□□□ 0.96
CSPG5-201ENST00000264723 SKOR1P84550 965 aa21.06■□□□□ 0.96
CSPG5-201ENST00000264723 QPCTQ16769 361 aa21.06■□□□□ 0.96
CSPG5-201ENST00000264723 WDR72Q3MJ13 1102 aa21.06■□□□□ 0.96
CSPG5-201ENST00000264723 MSL3Q8N5Y2 521 aaKnown RBP21.06■□□□□ 0.96
CSPG5-201ENST00000264723 MAD1L1Q9Y6D9 718 aa21.06■□□□□ 0.96
CSPG5-201ENST00000264723 CSDE1O75534 798 aaKnown RBP21.05■□□□□ 0.96
CSPG5-201ENST00000264723 RRM1P23921 792 aa21.05■□□□□ 0.96
CSPG5-201ENST00000264723 SLC8A1P32418 973 aa21.05■□□□□ 0.96
CSPG5-201ENST00000264723 SH3BP5LQ7L8J4 393 aa21.05■□□□□ 0.96
CSPG5-201ENST00000264723 ZBED8Q8IZ13 594 aa21.05■□□□□ 0.96
CSPG5-201ENST00000264723 SLC16A10Q8TF71 515 aa21.05■□□□□ 0.96
CSPG5-201ENST00000264723 SEPT10Q9P0V9 454 aa21.05■□□□□ 0.96
CSPG5-201ENST00000264723 MAGED2Q9UNF1 606 aaPredicted RBP21.05■□□□□ 0.96
CSPG5-201ENST00000264723 RPS6KA5O75582 802 aa21.05■□□□□ 0.96
CSPG5-201ENST00000264723 CIITAP33076 1130 aa21.05■□□□□ 0.96
CSPG5-201ENST00000264723 NPTX2P47972 431 aa21.05■□□□□ 0.96
CSPG5-201ENST00000264723 PTENP60484 403 aa21.05■□□□□ 0.96
CSPG5-201ENST00000264723 TMEM62Q0P6H9 643 aa21.05■□□□□ 0.96
CSPG5-201ENST00000264723 ECT2Q9H8V3 914 aa21.05■□□□□ 0.96
CSPG5-201ENST00000264723 ETNK1Q9HBU6 452 aa21.05■□□□□ 0.96
CSPG5-201ENST00000264723 GINM1Q9NU53 330 aa21.05■□□□□ 0.96
CSPG5-201ENST00000264723 NUB1Q9Y5A7 615 aa21.05■□□□□ 0.96
CSPG5-201ENST00000264723 ADAMTSL3P82987 1691 aa21.05■□□□□ 0.96
CSPG5-201ENST00000264723 F5H423 210 aaPredicted RBP21.05■□□□□ 0.96
CSPG5-201ENST00000264723 DDNO94850 711 aaPredicted RBP21.05■□□□□ 0.96
CSPG5-201ENST00000264723 CPNE8Q86YQ8 564 aa21.05■□□□□ 0.96
CSPG5-201ENST00000264723 IL31RAQ8NI17 732 aa21.05■□□□□ 0.96
CSPG5-201ENST00000264723 HSPH1Q92598 858 aa21.05■□□□□ 0.96
CSPG5-201ENST00000264723 KIAA1586Q9HCI6 787 aa21.05■□□□□ 0.96
CSPG5-201ENST00000264723 RARRES1P49788 294 aa21.04■□□□□ 0.96
CSPG5-201ENST00000264723 TMEM35BQ8NCS4 154 aa21.04■□□□□ 0.96
CSPG5-201ENST00000264723 SCFD2Q8WU76 684 aa21.04■□□□□ 0.96
CSPG5-201ENST00000264723 DNAJC18Q9H819 358 aa21.04■□□□□ 0.96
CSPG5-201ENST00000264723 COMMD10Q9Y6G5 202 aa21.04■□□□□ 0.96
CSPG5-201ENST00000264723 DUOX1Q9NRD9 1551 aa21.04■□□□□ 0.96
CSPG5-201ENST00000264723 SNHG28P0DPA3 235 aa21.04■□□□□ 0.96
CSPG5-201ENST00000264723 RARAP10276 462 aa21.04■□□□□ 0.96
CSPG5-201ENST00000264723 CYP11B1P15538 503 aa21.04■□□□□ 0.96
CSPG5-201ENST00000264723 PSMA2P25787 234 aa21.04■□□□□ 0.96
CSPG5-201ENST00000264723 NOP9Q86U38 636 aaKnown RBP21.04■□□□□ 0.96
CSPG5-201ENST00000264723 OR6B3Q8NGW1 331 aa21.04■□□□□ 0.96
CSPG5-201ENST00000264723 SEPT1Q8WYJ6 367 aa21.04■□□□□ 0.96
CSPG5-201ENST00000264723 SLC5A5Q92911 643 aa21.04■□□□□ 0.96
CSPG5-201ENST00000264723 TBX20Q9UMR3 447 aa21.04■□□□□ 0.96
CSPG5-201ENST00000264723 YDJCA8MPS7 323 aa21.04■□□□□ 0.96
CSPG5-201ENST00000264723 PPP6R3Q5H9R7 873 aaPredicted RBP21.04■□□□□ 0.96
CSPG5-201ENST00000264723 FAM83AQ86UY5 434 aa21.04■□□□□ 0.96
CSPG5-201ENST00000264723 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.04■□□□□ 0.96
CSPG5-201ENST00000264723 SH3GL2Q99962 352 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms