RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 PCSK1NQ9UHG2 260 aa17.15■□□□□ 0.34
SREBF1-201ENST00000261646 PPEF1O14829 653 aaPredicted RBP17.15■□□□□ 0.34
SREBF1-201ENST00000261646 CNGA1P29973 690 aa17.15■□□□□ 0.34
SREBF1-201ENST00000261646 YWHAEP62258 255 aaKnown RBP17.15■□□□□ 0.34
SREBF1-201ENST00000261646 SF3B3Q15393 1217 aaKnown RBP17.15■□□□□ 0.34
SREBF1-201ENST00000261646 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.15■□□□□ 0.34
SREBF1-201ENST00000261646 STK32AQ8WU08 396 aa17.15■□□□□ 0.34
SREBF1-201ENST00000261646 ATXN2LQ8WWM7 1075 aaKnown RBP17.15■□□□□ 0.34
SREBF1-201ENST00000261646 HSPH1Q92598 858 aa17.15■□□□□ 0.34
SREBF1-201ENST00000261646 BLOC1S4Q9NUP1 217 aa17.15■□□□□ 0.34
SREBF1-201ENST00000261646 PPIP5K2O43314 1243 aa17.14■□□□□ 0.34
SREBF1-201ENST00000261646 ZBED1O96006 694 aa17.14■□□□□ 0.34
SREBF1-201ENST00000261646 GSTA2P09210 222 aa17.14■□□□□ 0.34
SREBF1-201ENST00000261646 ALCAMQ13740 583 aa17.14■□□□□ 0.34
SREBF1-201ENST00000261646 SMAD1Q15797 465 aaKnown RBP17.14■□□□□ 0.34
SREBF1-201ENST00000261646 DEPDC1BQ8WUY9 529 aa17.14■□□□□ 0.34
SREBF1-201ENST00000261646 CENPTQ96BT3 561 aa17.14■□□□□ 0.34
SREBF1-201ENST00000261646 FIS1Q9Y3D6 152 aa17.14■□□□□ 0.34
SREBF1-201ENST00000261646 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.14■□□□□ 0.34
SREBF1-201ENST00000261646 ATXN2Q99700 1313 aaKnown RBP17.14■□□□□ 0.34
SREBF1-201ENST00000261646 PALM3A6NDB9 673 aaPredicted RBP17.14■□□□□ 0.33
SREBF1-201ENST00000261646 CES2O00748 559 aa17.14■□□□□ 0.33
SREBF1-201ENST00000261646 RALAP11233 206 aa17.14■□□□□ 0.33
SREBF1-201ENST00000261646 GARSP41250 739 aaKnown RBP17.14■□□□□ 0.33
SREBF1-201ENST00000261646 PRELPP51888 382 aa17.14■□□□□ 0.33
SREBF1-201ENST00000261646 ZCWPW2Q504Y3 356 aa17.14■□□□□ 0.33
SREBF1-201ENST00000261646 C3orf62Q6ZUJ4 267 aa17.14■□□□□ 0.33
SREBF1-201ENST00000261646 RAPH1Q70E73 1250 aa17.14■□□□□ 0.33
SREBF1-201ENST00000261646 FBXO33Q7Z6M2 555 aa17.14■□□□□ 0.33
SREBF1-201ENST00000261646 CATSPER3Q86XQ3 398 aa17.14■□□□□ 0.33
SREBF1-201ENST00000261646 FBXL13Q8NEE6 735 aa17.14■□□□□ 0.33
SREBF1-201ENST00000261646 PARD3BQ8TEW8 1205 aa17.14■□□□□ 0.33
SREBF1-201ENST00000261646 PNMA5Q96PV4 448 aa17.14■□□□□ 0.33
SREBF1-201ENST00000261646 RNPEPL1Q9HAU8 725 aa17.14■□□□□ 0.33
SREBF1-201ENST00000261646 MTMR4Q9NYA4 1195 aa17.14■□□□□ 0.33
SREBF1-201ENST00000261646 C3P01024 1663 aa17.14■□□□□ 0.33
SREBF1-201ENST00000261646 A0A0A6YYK5 440 aaPredicted RBP17.14■□□□□ 0.33
SREBF1-201ENST00000261646 CRCPO75575 148 aa17.14■□□□□ 0.33
SREBF1-201ENST00000261646 KRT16P08779 473 aa17.14■□□□□ 0.33
SREBF1-201ENST00000261646 KPNB1Q14974 876 aaKnown RBP17.14■□□□□ 0.33
SREBF1-201ENST00000261646 LARGE2Q8N3Y3 721 aa17.14■□□□□ 0.33
SREBF1-201ENST00000261646 B4GALNT2Q8NHY0 566 aa17.14■□□□□ 0.33
SREBF1-201ENST00000261646 SNRNP27Q8WVK2 155 aaKnown RBP17.14■□□□□ 0.33
SREBF1-201ENST00000261646 MANSC1Q9H8J5 431 aa17.14■□□□□ 0.33
SREBF1-201ENST00000261646 KCNG1Q9UIX4 513 aa17.14■□□□□ 0.33
SREBF1-201ENST00000261646 GINS2Q9Y248 185 aa17.14■□□□□ 0.33
SREBF1-201ENST00000261646 RASSF9O75901 435 aa17.14■□□□□ 0.33
SREBF1-201ENST00000261646 CCNHP51946 323 aaPredicted RBP17.14■□□□□ 0.33
SREBF1-201ENST00000261646 BTKQ06187 659 aa17.14■□□□□ 0.33
SREBF1-201ENST00000261646 CYTH1Q15438 398 aa17.14■□□□□ 0.33
SREBF1-201ENST00000261646 CNGA2Q16280 664 aa17.14■□□□□ 0.33
SREBF1-201ENST00000261646 ARHGEF16Q5VV41 709 aa17.14■□□□□ 0.33
SREBF1-201ENST00000261646 PDZD8Q8NEN9 1154 aa17.14■□□□□ 0.33
SREBF1-201ENST00000261646 FAM213AQ9BRX8 229 aa17.14■□□□□ 0.33
SREBF1-201ENST00000261646 SCARA5Q6ZMJ2 495 aa17.13■□□□□ 0.33
SREBF1-201ENST00000261646 MYO3BQ8WXR4 1341 aa17.13■□□□□ 0.33
SREBF1-201ENST00000261646 MTO1Q9Y2Z2 717 aaKnown RBP17.13■□□□□ 0.33
SREBF1-201ENST00000261646 HSPA4LO95757 839 aa17.13■□□□□ 0.33
SREBF1-201ENST00000261646 ATP4AP20648 1035 aa17.13■□□□□ 0.33
SREBF1-201ENST00000261646 PTPN4P29074 926 aa17.13■□□□□ 0.33
SREBF1-201ENST00000261646 ZNF543Q08ER8 600 aa17.13■□□□□ 0.33
SREBF1-201ENST00000261646 KCNK18Q7Z418 384 aa17.13■□□□□ 0.33
SREBF1-201ENST00000261646 CTNNAL1Q9UBT7 734 aa17.13■□□□□ 0.33
SREBF1-201ENST00000261646 SEPT9Q9UHD8 586 aaPredicted RBP17.13■□□□□ 0.33
SREBF1-201ENST00000261646 H0YIN7 160 aa17.13■□□□□ 0.33
SREBF1-201ENST00000261646 BBOX1O75936 387 aa17.13■□□□□ 0.33
SREBF1-201ENST00000261646 TFAMQ00059 246 aaKnown RBP17.13■□□□□ 0.33
SREBF1-201ENST00000261646 CNGA3Q16281 694 aa17.13■□□□□ 0.33
SREBF1-201ENST00000261646 DAB2IPQ5VWQ8 1189 aa17.13■□□□□ 0.33
SREBF1-201ENST00000261646 HAUS6Q7Z4H7 955 aa17.13■□□□□ 0.33
SREBF1-201ENST00000261646 RBBP8NLQ8NC74 664 aaPredicted RBP17.13■□□□□ 0.33
SREBF1-201ENST00000261646 CCT6BQ92526 530 aa17.13■□□□□ 0.33
SREBF1-201ENST00000261646 LXNQ9BS40 222 aa17.13■□□□□ 0.33
SREBF1-201ENST00000261646 LRCH1Q9Y2L9 728 aa17.13■□□□□ 0.33
SREBF1-201ENST00000261646 C2CD2Q9Y426 696 aa17.13■□□□□ 0.33
SREBF1-201ENST00000261646 H0YCG3 227 aa17.12■□□□□ 0.33
SREBF1-201ENST00000261646 STAT2P52630 851 aa17.12■□□□□ 0.33
SREBF1-201ENST00000261646 GSCP56915 257 aaPredicted RBP17.12■□□□□ 0.33
SREBF1-201ENST00000261646 C2CD6Q53TS8 623 aa17.12■□□□□ 0.33
SREBF1-201ENST00000261646 LMBRD2Q68DH5 695 aaPredicted RBP17.12■□□□□ 0.33
SREBF1-201ENST00000261646 AADACL2Q6P093 401 aa17.12■□□□□ 0.33
SREBF1-201ENST00000261646 ARID3BQ8IVW6 561 aaPredicted RBP17.12■□□□□ 0.33
SREBF1-201ENST00000261646 RIBC1Q8N443 379 aaPredicted RBP17.12■□□□□ 0.33
SREBF1-201ENST00000261646 CXorf38Q8TB03 319 aa17.12■□□□□ 0.33
SREBF1-201ENST00000261646 SCFD2Q8WU76 684 aa17.12■□□□□ 0.33
SREBF1-201ENST00000261646 EFHD1Q9BUP0 239 aa17.12■□□□□ 0.33
SREBF1-201ENST00000261646 ETAA1Q9NY74 926 aa17.12■□□□□ 0.33
SREBF1-201ENST00000261646 HEY1Q9Y5J3 304 aa17.12■□□□□ 0.33
SREBF1-201ENST00000261646 MED24O75448 989 aa17.12■□□□□ 0.33
SREBF1-201ENST00000261646 ATP6V1B1P15313 513 aa17.12■□□□□ 0.33
SREBF1-201ENST00000261646 RPA1P27694 616 aa17.12■□□□□ 0.33
SREBF1-201ENST00000261646 CDO1Q16878 200 aa17.12■□□□□ 0.33
SREBF1-201ENST00000261646 DNAL1Q4LDG9 190 aa17.12■□□□□ 0.33
SREBF1-201ENST00000261646 TRIM50Q86XT4 487 aa17.12■□□□□ 0.33
SREBF1-201ENST00000261646 APLFQ8IW19 511 aaPredicted RBP17.12■□□□□ 0.33
SREBF1-201ENST00000261646 DCLK2Q8N568 766 aa17.12■□□□□ 0.33
SREBF1-201ENST00000261646 TTC13Q8NBP0 860 aa17.12■□□□□ 0.33
SREBF1-201ENST00000261646 ANKRD27Q96NW4 1050 aa17.12■□□□□ 0.33
SREBF1-201ENST00000261646 RPS6KC1Q96S38 1066 aa17.12■□□□□ 0.33
SREBF1-201ENST00000261646 MYLK2Q9H1R3 596 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms