RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 ATF2P15336 505 aa16.79■□□□□ 0.28
RFX1-201ENST00000254325 MKRN4PQ13434 485 aaPredicted RBP16.79■□□□□ 0.28
RFX1-201ENST00000254325 SURF1Q15526 300 aa16.79■□□□□ 0.28
RFX1-201ENST00000254325 LY6KQ17RY6 165 aa16.79■□□□□ 0.28
RFX1-201ENST00000254325 JAMLQ86YT9 394 aa16.79■□□□□ 0.28
RFX1-201ENST00000254325 FAM71AQ8IYT1 594 aa16.79■□□□□ 0.28
RFX1-201ENST00000254325 ANKRD13AQ8IZ07 590 aa16.79■□□□□ 0.28
RFX1-201ENST00000254325 PHF2O75151 1096 aa16.79■□□□□ 0.28
RFX1-201ENST00000254325 UBA1P22314 1058 aaKnown RBP16.79■□□□□ 0.28
RFX1-201ENST00000254325 ZNF699Q32M78 642 aa16.79■□□□□ 0.28
RFX1-201ENST00000254325 TREML2Q5T2D2 321 aa16.79■□□□□ 0.28
RFX1-201ENST00000254325 B3GNT9Q6UX72 402 aa16.79■□□□□ 0.28
RFX1-201ENST00000254325 NLGN2Q8NFZ4 835 aa16.79■□□□□ 0.28
RFX1-201ENST00000254325 ASAP3Q8TDY4 903 aa16.79■□□□□ 0.28
RFX1-201ENST00000254325 KREMEN1Q96MU8 473 aa16.79■□□□□ 0.28
RFX1-201ENST00000254325 RPF1Q9H9Y2 349 aaKnown RBP16.79■□□□□ 0.28
RFX1-201ENST00000254325 SCINQ9Y6U3 715 aa16.79■□□□□ 0.28
RFX1-201ENST00000254325 TTLL4Q14679 1199 aa16.78■□□□□ 0.28
RFX1-201ENST00000254325 TRADDQ15628 312 aa16.78■□□□□ 0.28
RFX1-201ENST00000254325 DUOXA2Q1HG44 320 aa16.78■□□□□ 0.28
RFX1-201ENST00000254325 ABHD15Q6UXT9 468 aa16.78■□□□□ 0.28
RFX1-201ENST00000254325 CDR2LQ86X02 465 aaPredicted RBP16.78■□□□□ 0.28
RFX1-201ENST00000254325 SHC3Q92529 594 aa16.78■□□□□ 0.28
RFX1-201ENST00000254325 ATP6V1G3Q96LB4 118 aa16.78■□□□□ 0.28
RFX1-201ENST00000254325 GPC3P51654 580 aa16.78■□□□□ 0.28
RFX1-201ENST00000254325 DLK2Q6UY11 383 aa16.78■□□□□ 0.28
RFX1-201ENST00000254325 DPP9Q86TI2 863 aa16.78■□□□□ 0.28
RFX1-201ENST00000254325 C2orf40Q9H1Z8 148 aa16.78■□□□□ 0.28
RFX1-201ENST00000254325 TLR3O15455 904 aaKnown RBP16.78■□□□□ 0.28
RFX1-201ENST00000254325 PPFIA4O75335 1185 aa16.78■□□□□ 0.28
RFX1-201ENST00000254325 IFNB1P01574 187 aa16.78■□□□□ 0.28
RFX1-201ENST00000254325 ADSSP30520 456 aa16.78■□□□□ 0.28
RFX1-201ENST00000254325 KCNJ1P48048 391 aa16.78■□□□□ 0.28
RFX1-201ENST00000254325 ERO1BQ86YB8 467 aa16.78■□□□□ 0.28
RFX1-201ENST00000254325 HES6Q96HZ4 224 aa16.78■□□□□ 0.28
RFX1-201ENST00000254325 RPS6KC1Q96S38 1066 aa16.78■□□□□ 0.28
RFX1-201ENST00000254325 ERP44Q9BS26 406 aa16.78■□□□□ 0.28
RFX1-201ENST00000254325 KCNK9Q9NPC2 374 aa16.78■□□□□ 0.28
RFX1-201ENST00000254325 ZC3H11AO75152 810 aaKnown RBP eCLIP16.77■□□□□ 0.28
RFX1-201ENST00000254325 SLC25A27O95847 323 aa16.77■□□□□ 0.28
RFX1-201ENST00000254325 MYBL1P10243 752 aa16.77■□□□□ 0.28
RFX1-201ENST00000254325 CUL2Q13617 745 aa16.77■□□□□ 0.28
RFX1-201ENST00000254325 C11orf63Q6NUN7 778 aa16.77■□□□□ 0.28
RFX1-201ENST00000254325 TRIM72Q6ZMU5 477 aa16.77■□□□□ 0.28
RFX1-201ENST00000254325 MMS22LQ6ZRQ5 1243 aa16.77■□□□□ 0.28
RFX1-201ENST00000254325 B4GALNT4Q76KP1 1039 aa16.77■□□□□ 0.28
RFX1-201ENST00000254325 TRIM50Q86XT4 487 aa16.77■□□□□ 0.28
RFX1-201ENST00000254325 CCDC125Q86Z20 511 aa16.77■□□□□ 0.28
RFX1-201ENST00000254325 KRT35Q92764 455 aa16.77■□□□□ 0.28
RFX1-201ENST00000254325 RGS17Q9UGC6 210 aaPredicted RBP16.77■□□□□ 0.28
RFX1-201ENST00000254325 ZNF148Q9UQR1 794 aa16.77■□□□□ 0.28
RFX1-201ENST00000254325 POLR2BP30876 1174 aaKnown RBP16.77■□□□□ 0.28
RFX1-201ENST00000254325 HSD17B3P37058 310 aa16.77■□□□□ 0.28
RFX1-201ENST00000254325 SLCO1A2P46721 670 aa16.77■□□□□ 0.28
RFX1-201ENST00000254325 MXD4Q14582 209 aaPredicted RBP16.77■□□□□ 0.28
RFX1-201ENST00000254325 IER5Q5VY09 327 aa16.77■□□□□ 0.28
RFX1-201ENST00000254325 KCNV1Q6PIU1 500 aa16.77■□□□□ 0.28
RFX1-201ENST00000254325 ZNF572Q7Z3I7 529 aaPredicted RBP16.77■□□□□ 0.28
RFX1-201ENST00000254325 GLRA2P23416 452 aa16.77■□□□□ 0.27
RFX1-201ENST00000254325 SEPT7Q16181 437 aaKnown RBP16.77■□□□□ 0.27
RFX1-201ENST00000254325 FASTKD5Q7L8L6 764 aaKnown RBP16.77■□□□□ 0.27
RFX1-201ENST00000254325 OTUD6BQ8N6M0 293 aa16.77■□□□□ 0.27
RFX1-201ENST00000254325 TMEM35BQ8NCS4 154 aa16.77■□□□□ 0.27
RFX1-201ENST00000254325 C18orf8Q96DM3 657 aa16.77■□□□□ 0.27
RFX1-201ENST00000254325 C12orf42Q96LP6 360 aa16.77■□□□□ 0.27
RFX1-201ENST00000254325 PORCNQ9H237 461 aa16.77■□□□□ 0.27
RFX1-201ENST00000254325 DNAJC17Q9NVM6 304 aaKnown RBP16.77■□□□□ 0.27
RFX1-201ENST00000254325 IRF6O14896 467 aa16.77■□□□□ 0.27
RFX1-201ENST00000254325 ATP2C2O75185 946 aa16.77■□□□□ 0.27
RFX1-201ENST00000254325 KRT1P04264 644 aa16.77■□□□□ 0.27
RFX1-201ENST00000254325 PPP1R2P3Q6NXS1 205 aa16.77■□□□□ 0.27
RFX1-201ENST00000254325 AADACL2Q6P093 401 aa16.77■□□□□ 0.27
RFX1-201ENST00000254325 CROCCP2Q86T23 111 aa16.77■□□□□ 0.27
RFX1-201ENST00000254325 ERICH1Q86X53 443 aa16.77■□□□□ 0.27
RFX1-201ENST00000254325 SCFD2Q8WU76 684 aa16.77■□□□□ 0.27
RFX1-201ENST00000254325 RNF25Q96BH1 459 aaPredicted RBP16.77■□□□□ 0.27
RFX1-201ENST00000254325 ADPGKQ9BRR6 497 aa16.77■□□□□ 0.27
RFX1-201ENST00000254325 SPON1Q9HCB6 807 aa16.77■□□□□ 0.27
RFX1-201ENST00000254325 XPNPEP1Q9NQW7 623 aa16.77■□□□□ 0.27
RFX1-201ENST00000254325 GOLGA6L7A0A1B0GV03 622 aa16.76■□□□□ 0.27
RFX1-201ENST00000254325 P4HA1P13674 534 aa16.76■□□□□ 0.27
RFX1-201ENST00000254325 RRM1P23921 792 aa16.76■□□□□ 0.27
RFX1-201ENST00000254325 MAN1A1P33908 653 aa16.76■□□□□ 0.27
RFX1-201ENST00000254325 GCNT1Q02742 428 aa16.76■□□□□ 0.27
RFX1-201ENST00000254325 METTL7BQ6UX53 244 aa16.76■□□□□ 0.27
RFX1-201ENST00000254325 PCDHB18PQ96TA0 734 aa16.76■□□□□ 0.27
RFX1-201ENST00000254325 PMS2P54278 862 aa16.76■□□□□ 0.27
RFX1-201ENST00000254325 ZNF667Q5HYK9 610 aa16.76■□□□□ 0.27
RFX1-201ENST00000254325 SLC13A5Q86YT5 568 aaPredicted RBP16.76■□□□□ 0.27
RFX1-201ENST00000254325 FBXO16Q8IX29 292 aaPredicted RBP16.76■□□□□ 0.27
RFX1-201ENST00000254325 CYFIP2Q96F07 1278 aa16.76■□□□□ 0.27
RFX1-201ENST00000254325 ASCC2Q9H1I8 757 aaPredicted RBP16.76■□□□□ 0.27
RFX1-201ENST00000254325 AFG3L2Q9Y4W6 797 aa16.76■□□□□ 0.27
RFX1-201ENST00000254325 SMCHD1A6NHR9 2005 aa16.76■□□□□ 0.27
RFX1-201ENST00000254325 MYPNQ86TC9 1320 aa16.76■□□□□ 0.27
RFX1-201ENST00000254325 ATP2A1O14983 1001 aa16.76■□□□□ 0.27
RFX1-201ENST00000254325 FMO1Q01740 532 aa16.76■□□□□ 0.27
RFX1-201ENST00000254325 PSMD6Q15008 389 aa16.76■□□□□ 0.27
RFX1-201ENST00000254325 NLRP7Q8WX94 980 aa16.76■□□□□ 0.27
RFX1-201ENST00000254325 MFSD14AQ96MC6 490 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms