RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 CDH24Q86UP0 819 aa14.56□□□□□ -0.08
TARDBP-201ENST00000240185 NLRP10Q86W26 655 aa14.56□□□□□ -0.08
TARDBP-201ENST00000240185 RIN3Q8TB24 985 aa14.56□□□□□ -0.08
TARDBP-201ENST00000240185 PGBD4Q96DM1 585 aa14.56□□□□□ -0.08
TARDBP-201ENST00000240185 IL1RL2Q9HB29 575 aa14.56□□□□□ -0.08
TARDBP-201ENST00000240185 RBM12Q9NTZ6 932 aaKnown RBP14.56□□□□□ -0.08
TARDBP-201ENST00000240185 NEU2Q9Y3R4 380 aa14.56□□□□□ -0.08
TARDBP-201ENST00000240185 UBN2Q6ZU65 1347 aa14.55□□□□□ -0.08
TARDBP-201ENST00000240185 HOXA13P31271 388 aaPredicted RBP14.55□□□□□ -0.08
TARDBP-201ENST00000240185 ZNF200P98182 395 aaPredicted RBP14.55□□□□□ -0.08
TARDBP-201ENST00000240185 OTUD4Q01804 1114 aaKnown RBP14.55□□□□□ -0.08
TARDBP-201ENST00000240185 EFHC2Q5JST6 749 aa14.55□□□□□ -0.08
TARDBP-201ENST00000240185 SYCP2LQ5T4T6 812 aa14.55□□□□□ -0.08
TARDBP-201ENST00000240185 SYDE2Q5VT97 1194 aa14.55□□□□□ -0.08
TARDBP-201ENST00000240185 TMC4Q7Z404 712 aa14.55□□□□□ -0.08
TARDBP-201ENST00000240185 RAD54LQ92698 747 aa14.55□□□□□ -0.08
TARDBP-201ENST00000240185 TRIM63Q969Q1 353 aa14.55□□□□□ -0.08
TARDBP-201ENST00000240185 KLF6Q99612 283 aaPredicted RBP14.55□□□□□ -0.08
TARDBP-201ENST00000240185 CHP1Q99653 195 aa14.55□□□□□ -0.08
TARDBP-201ENST00000240185 ROPN1BQ9BZX4 212 aaPredicted RBP14.55□□□□□ -0.08
TARDBP-201ENST00000240185 PPCSQ9HAB8 311 aa14.55□□□□□ -0.08
TARDBP-201ENST00000240185 ROPN1Q9HAT0 212 aaPredicted RBP14.55□□□□□ -0.08
TARDBP-201ENST00000240185 SPDYE5A6NIY4 337 aa14.55□□□□□ -0.08
TARDBP-201ENST00000240185 PRPF4O43172 522 aaKnown RBP eCLIP14.55□□□□□ -0.082e-14■■□□□ 12.4
TARDBP-201ENST00000240185 RALBP11234 206 aa14.55□□□□□ -0.08
TARDBP-201ENST00000240185 TBXAS1P24557 533 aaPredicted RBP14.55□□□□□ -0.08
TARDBP-201ENST00000240185 SOX6P35712 828 aa14.55□□□□□ -0.08
TARDBP-201ENST00000240185 COPAP53621 1224 aa14.55□□□□□ -0.08
TARDBP-201ENST00000240185 SPDYE7PQ495Y7 208 aa14.55□□□□□ -0.08
TARDBP-201ENST00000240185 FAM213AQ9BRX8 229 aa14.55□□□□□ -0.08
TARDBP-201ENST00000240185 MCM8Q9UJA3 840 aa14.55□□□□□ -0.08
TARDBP-201ENST00000240185 EDC4Q6P2E9 1401 aaKnown RBP14.55□□□□□ -0.08
TARDBP-201ENST00000240185 DISP1Q96F81 1524 aa14.55□□□□□ -0.08
TARDBP-201ENST00000240185 SERPINB9P50453 376 aa14.55□□□□□ -0.08
TARDBP-201ENST00000240185 KHDRBS2Q5VWX1 349 aaKnown RBP14.55□□□□□ -0.08
TARDBP-201ENST00000240185 DPF2Q92785 391 aa14.55□□□□□ -0.08
TARDBP-201ENST00000240185 MANSC1Q9H8J5 431 aa14.55□□□□□ -0.08
TARDBP-201ENST00000240185 SERPINB13Q9UIV8 391 aa14.55□□□□□ -0.08
TARDBP-201ENST00000240185 GPATCH8Q9UKJ3 1502 aaKnown RBP14.55□□□□□ -0.08
TARDBP-201ENST00000240185 ZNF804BA4D1E1 1349 aa14.55□□□□□ -0.08
TARDBP-201ENST00000240185 PNMA6FA0A0J9YX94 578 aa14.55□□□□□ -0.08
TARDBP-201ENST00000240185 APRTP07741 180 aa14.55□□□□□ -0.08
TARDBP-201ENST00000240185 DDX5P17844 614 aaKnown RBP14.55□□□□□ -0.08
TARDBP-201ENST00000240185 PTK7Q13308 1070 aa14.55□□□□□ -0.08
TARDBP-201ENST00000240185 FAM102AQ5T9C2 384 aaPredicted RBP14.55□□□□□ -0.08
TARDBP-201ENST00000240185 TADA1Q96BN2 335 aa14.55□□□□□ -0.08
TARDBP-201ENST00000240185 UHRF1BP1LA0JNW5 1464 aa14.54□□□□□ -0.08
TARDBP-201ENST00000240185 SKAP2O75563 359 aaPredicted RBP14.54□□□□□ -0.08
TARDBP-201ENST00000240185 TPP2P29144 1249 aaPredicted RBP14.54□□□□□ -0.08
TARDBP-201ENST00000240185 PLA2G4AP47712 749 aa14.54□□□□□ -0.08
TARDBP-201ENST00000240185 CSTF3Q12996 717 aaKnown RBP14.54□□□□□ -0.08
TARDBP-201ENST00000240185 FAM180AQ6UWF9 173 aa14.54□□□□□ -0.08
TARDBP-201ENST00000240185 BNIPLQ7Z465 357 aa14.54□□□□□ -0.08
TARDBP-201ENST00000240185 DPP9Q86TI2 863 aa14.54□□□□□ -0.08
TARDBP-201ENST00000240185 IL17REQ8NFR9 667 aa14.54□□□□□ -0.08
TARDBP-201ENST00000240185 ASIC4Q96FT7 647 aa14.54□□□□□ -0.08
TARDBP-201ENST00000240185 CDCA7Q9BWT1 371 aaPredicted RBP14.54□□□□□ -0.08
TARDBP-201ENST00000240185 TASP1Q9H6P5 420 aa14.54□□□□□ -0.08
TARDBP-201ENST00000240185 LRFN2Q9ULH4 789 aa14.54□□□□□ -0.08
TARDBP-201ENST00000240185 SPATA2Q9UM82 520 aa14.54□□□□□ -0.08
TARDBP-201ENST00000240185 TMA7Q9Y2S6 64 aaKnown RBP14.54□□□□□ -0.08
TARDBP-201ENST00000240185 FAM200BP0CF97 657 aa14.54□□□□□ -0.08
TARDBP-201ENST00000240185 DNAJC3Q13217 504 aa14.54□□□□□ -0.08
TARDBP-201ENST00000240185 RASGRF1Q13972 1273 aa14.54□□□□□ -0.08
TARDBP-201ENST00000240185 ARHGAP22Q7Z5H3 698 aa14.54□□□□□ -0.08
TARDBP-201ENST00000240185 SH3GLB2Q9NR46 395 aa14.54□□□□□ -0.08
TARDBP-201ENST00000240185 CYTH3O43739 400 aa14.54□□□□□ -0.08
TARDBP-201ENST00000240185 GDF11O95390 407 aa14.54□□□□□ -0.08
TARDBP-201ENST00000240185 ATP1A4Q13733 1029 aa14.54□□□□□ -0.08
TARDBP-201ENST00000240185 OASLQ15646 514 aaKnown RBP14.54□□□□□ -0.08
TARDBP-201ENST00000240185 RNF219Q5W0B1 726 aaPredicted RBP14.54□□□□□ -0.08
TARDBP-201ENST00000240185 PI16Q6UXB8 463 aa14.54□□□□□ -0.08
TARDBP-201ENST00000240185 TRIM72Q6ZMU5 477 aa14.54□□□□□ -0.08
TARDBP-201ENST00000240185 GUF1Q8N442 669 aaKnown RBP14.54□□□□□ -0.08
TARDBP-201ENST00000240185 MDM1Q8TC05 714 aa14.54□□□□□ -0.08
TARDBP-201ENST00000240185 PARVAQ9NVD7 372 aa14.54□□□□□ -0.08
TARDBP-201ENST00000240185 IMPAD1Q9NX62 359 aa14.54□□□□□ -0.08
TARDBP-201ENST00000240185 APOL1O14791 398 aa14.54□□□□□ -0.08
TARDBP-201ENST00000240185 KCNN4O15554 427 aa14.54□□□□□ -0.08
TARDBP-201ENST00000240185 MYL2P10916 166 aa14.54□□□□□ -0.08
TARDBP-201ENST00000240185 TOB2Q14106 344 aaPredicted RBP14.54□□□□□ -0.08
TARDBP-201ENST00000240185 USP10Q14694 798 aaKnown RBP14.54□□□□□ -0.08
TARDBP-201ENST00000240185 CYFIP1Q7L576 1253 aa14.54□□□□□ -0.08
TARDBP-201ENST00000240185 LRRC34Q8IZ02 419 aa14.54□□□□□ -0.08
TARDBP-201ENST00000240185 E2F7Q96AV8 911 aa14.54□□□□□ -0.08
TARDBP-201ENST00000240185 MAML3Q96JK9 1138 aa14.54□□□□□ -0.08
TARDBP-201ENST00000240185 HPS4Q9NQG7 708 aa14.54□□□□□ -0.08
TARDBP-201ENST00000240185 RAD51CO43502 376 aa14.53□□□□□ -0.08
TARDBP-201ENST00000240185 SLC27A3Q5K4L6 730 aa14.53□□□□□ -0.08
TARDBP-201ENST00000240185 RSBN1Q5VWQ0 802 aaPredicted RBP14.53□□□□□ -0.08
TARDBP-201ENST00000240185 PKN3Q6P5Z2 889 aa14.53□□□□□ -0.08
TARDBP-201ENST00000240185 RASGRP2Q7LDG7 609 aa14.53□□□□□ -0.08
TARDBP-201ENST00000240185 MFN1Q8IWA4 741 aa14.53□□□□□ -0.08
TARDBP-201ENST00000240185 CATSPER2Q96P56 530 aa14.53□□□□□ -0.08
TARDBP-201ENST00000240185 SP110Q9HB58 689 aa14.53□□□□□ -0.08
TARDBP-201ENST00000240185 FAM153AQ9UHL3 310 aa14.53□□□□□ -0.08
TARDBP-201ENST00000240185 CDY2AQ9Y6F7 541 aa14.53□□□□□ -0.08
TARDBP-201ENST00000240185 CDY1Q9Y6F8 540 aa14.53□□□□□ -0.08
TARDBP-201ENST00000240185 MAGI3Q5TCQ9 1506 aa14.53□□□□□ -0.08
TARDBP-201ENST00000240185 CYP2D7A0A087X1C5 515 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms