RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 FBXW10Q5XX13 1052 aa15.34■□□□□ 0.05
SPTLC2-201ENST00000216484 ZNF786Q8N393 782 aa15.34■□□□□ 0.05
SPTLC2-201ENST00000216484 ZFYVE9O95405 1425 aa15.34■□□□□ 0.05
SPTLC2-201ENST00000216484 E9PBE3 544 aa15.34■□□□□ 0.05
SPTLC2-201ENST00000216484 M0QYV0 167 aa15.34■□□□□ 0.05
SPTLC2-201ENST00000216484 YWHAZP63104 245 aaKnown RBP15.34■□□□□ 0.05
SPTLC2-201ENST00000216484 GPR141Q7Z602 305 aa15.34■□□□□ 0.05
SPTLC2-201ENST00000216484 LRRC71Q8N4P6 559 aa15.34■□□□□ 0.05
SPTLC2-201ENST00000216484 COA7Q96BR5 231 aa15.34■□□□□ 0.05
SPTLC2-201ENST00000216484 OSBPL6Q9BZF3 934 aa15.34■□□□□ 0.05
SPTLC2-201ENST00000216484 CAAP1Q9H8G2 361 aa15.34■□□□□ 0.05
SPTLC2-201ENST00000216484 ZSWIM6Q9HCJ5 1215 aa15.34■□□□□ 0.05
SPTLC2-201ENST00000216484 ZNF839A8K0R7 811 aa15.34■□□□□ 0.05
SPTLC2-201ENST00000216484 GRIK1P39086 918 aa15.34■□□□□ 0.05
SPTLC2-201ENST00000216484 WLSQ5T9L3 541 aa15.34■□□□□ 0.05
SPTLC2-201ENST00000216484 ASAP3Q8TDY4 903 aa15.34■□□□□ 0.05
SPTLC2-201ENST00000216484 CLASP2O75122 1294 aaKnown RBP15.34■□□□□ 0.05
SPTLC2-201ENST00000216484 IL6P05231 212 aa15.34■□□□□ 0.05
SPTLC2-201ENST00000216484 FAM102AQ5T9C2 384 aaPredicted RBP15.34■□□□□ 0.05
SPTLC2-201ENST00000216484 CNPY4Q8N129 248 aa15.34■□□□□ 0.05
SPTLC2-201ENST00000216484 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.33■□□□□ 0.05
SPTLC2-201ENST00000216484 ZBTB39O15060 712 aa15.33■□□□□ 0.05
SPTLC2-201ENST00000216484 PGK2P07205 417 aa15.33■□□□□ 0.05
SPTLC2-201ENST00000216484 DNAL1Q4LDG9 190 aa15.33■□□□□ 0.05
SPTLC2-201ENST00000216484 DDI2Q5TDH0 399 aa15.33■□□□□ 0.05
SPTLC2-201ENST00000216484 PLEKHA7Q6IQ23 1121 aa15.33■□□□□ 0.05
SPTLC2-201ENST00000216484 BEST2Q8NFU1 509 aa15.33■□□□□ 0.05
SPTLC2-201ENST00000216484 TRIM39Q9HCM9 518 aa15.33■□□□□ 0.05
SPTLC2-201ENST00000216484 USP14P54578 494 aa15.33■□□□□ 0.05
SPTLC2-201ENST00000216484 WDR36Q8NI36 951 aaKnown RBP15.33■□□□□ 0.05
SPTLC2-201ENST00000216484 L3MBTL3Q96JM7 780 aaPredicted RBP15.33■□□□□ 0.05
SPTLC2-201ENST00000216484 ABCC4O15439 1325 aa15.33■□□□□ 0.04
SPTLC2-201ENST00000216484 SDC4P31431 198 aa15.33■□□□□ 0.04
SPTLC2-201ENST00000216484 CTTNQ14247 550 aaKnown RBP15.33■□□□□ 0.04
SPTLC2-201ENST00000216484 FUT11Q495W5 492 aa15.33■□□□□ 0.04
SPTLC2-201ENST00000216484 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.33■□□□□ 0.04
SPTLC2-201ENST00000216484 UBASH3BQ8TF42 649 aa15.33■□□□□ 0.04
SPTLC2-201ENST00000216484 DDX50Q9BQ39 737 aaKnown RBP15.33■□□□□ 0.04
SPTLC2-201ENST00000216484 PDE5AO76074 875 aa15.33■□□□□ 0.04
SPTLC2-201ENST00000216484 TMEM35BQ8NCS4 154 aa15.33■□□□□ 0.04
SPTLC2-201ENST00000216484 PTPRN2Q92932 1015 aa15.33■□□□□ 0.04
SPTLC2-201ENST00000216484 WNT8AQ9H1J5 351 aa15.33■□□□□ 0.04
SPTLC2-201ENST00000216484 VIPAS39Q9H9C1 493 aa15.33■□□□□ 0.04
SPTLC2-201ENST00000216484 STAP1Q9ULZ2 295 aa15.33■□□□□ 0.04
SPTLC2-201ENST00000216484 SAC3D1A6NKF1 404 aa15.33■□□□□ 0.04
SPTLC2-201ENST00000216484 CFAP99D6REC4 459 aa15.33■□□□□ 0.04
SPTLC2-201ENST00000216484 ABHD10Q9NUJ1 306 aa15.33■□□□□ 0.04
SPTLC2-201ENST00000216484 INTS13Q9NVM9 706 aa15.33■□□□□ 0.04
SPTLC2-201ENST00000216484 MYH15Q9Y2K3 1946 aa15.33■□□□□ 0.04
SPTLC2-201ENST00000216484 BCAR1P56945 870 aa15.33■□□□□ 0.04
SPTLC2-201ENST00000216484 TRIQKQ629K1 86 aa15.33■□□□□ 0.04
SPTLC2-201ENST00000216484 RAD21L1Q9H4I0 556 aa15.33■□□□□ 0.04
SPTLC2-201ENST00000216484 DDX56Q9NY93 547 aaKnown RBP15.33■□□□□ 0.04
SPTLC2-201ENST00000216484 CUL7Q14999 1698 aa15.33■□□□□ 0.04
SPTLC2-201ENST00000216484 YWHABP31946 246 aaKnown RBP15.33■□□□□ 0.04
SPTLC2-201ENST00000216484 MMRN1Q13201 1228 aa15.33■□□□□ 0.04
SPTLC2-201ENST00000216484 FAM98CQ17RN3 349 aaKnown RBP15.33■□□□□ 0.04
SPTLC2-201ENST00000216484 PRUNE1Q86TP1 453 aa15.33■□□□□ 0.04
SPTLC2-201ENST00000216484 MRPL48Q96GC5 212 aaKnown RBP15.33■□□□□ 0.04
SPTLC2-201ENST00000216484 TOPORSQ9NS56 1045 aaPredicted RBP15.33■□□□□ 0.04
SPTLC2-201ENST00000216484 NFICP08651 508 aa15.32■□□□□ 0.04
SPTLC2-201ENST00000216484 CDH6P55285 790 aa15.32■□□□□ 0.04
SPTLC2-201ENST00000216484 TWF1Q12792 350 aa15.32■□□□□ 0.04
SPTLC2-201ENST00000216484 ZNF618Q5T7W0 954 aa15.32■□□□□ 0.04
SPTLC2-201ENST00000216484 SYDE2Q5VT97 1194 aa15.32■□□□□ 0.04
SPTLC2-201ENST00000216484 TASP1Q9H6P5 420 aa15.32■□□□□ 0.04
SPTLC2-201ENST00000216484 ZMYM4Q5VZL5 1548 aa15.32■□□□□ 0.04
SPTLC2-201ENST00000216484 PSMA4P25789 261 aaKnown RBP15.32■□□□□ 0.04
SPTLC2-201ENST00000216484 EIF2B2P49770 351 aaKnown RBP15.32■□□□□ 0.04
SPTLC2-201ENST00000216484 PSMC5P62195 406 aa15.32■□□□□ 0.04
SPTLC2-201ENST00000216484 SLC39A14Q15043 492 aa15.32■□□□□ 0.04
SPTLC2-201ENST00000216484 TRIP10Q15642 601 aa15.32■□□□□ 0.04
SPTLC2-201ENST00000216484 VSTM4Q8IW00 320 aa15.32■□□□□ 0.04
SPTLC2-201ENST00000216484 MIER2Q8N344 545 aa15.32■□□□□ 0.04
SPTLC2-201ENST00000216484 MOSPD2Q8NHP6 518 aa15.32■□□□□ 0.04
SPTLC2-201ENST00000216484 TSPAN17Q96FV3 270 aa15.32■□□□□ 0.04
SPTLC2-201ENST00000216484 DLGAP2Q9P1A6 1054 aa15.32■□□□□ 0.04
SPTLC2-201ENST00000216484 ALDH1A1P00352 501 aa15.32■□□□□ 0.04
SPTLC2-201ENST00000216484 IL12RB1P42701 662 aa15.32■□□□□ 0.04
SPTLC2-201ENST00000216484 PRIM2P49643 509 aa15.32■□□□□ 0.04
SPTLC2-201ENST00000216484 DSG1Q02413 1049 aa15.32■□□□□ 0.04
SPTLC2-201ENST00000216484 PIGUQ9H490 435 aa15.32■□□□□ 0.04
SPTLC2-201ENST00000216484 AVENQ9NQS1 362 aaPredicted RBP15.32■□□□□ 0.04
SPTLC2-201ENST00000216484 ATP6V1HQ9UI12 483 aa15.32■□□□□ 0.04
SPTLC2-201ENST00000216484 DNAJC12Q9UKB3 198 aa15.32■□□□□ 0.04
SPTLC2-201ENST00000216484 FAM25AB3EWG3 89 aa15.32■□□□□ 0.04
SPTLC2-201ENST00000216484 FAM25CB3EWG5 89 aa15.32■□□□□ 0.04
SPTLC2-201ENST00000216484 FAM25GB3EWG6 89 aa15.32■□□□□ 0.04
SPTLC2-201ENST00000216484 STX4Q12846 297 aa15.32■□□□□ 0.04
SPTLC2-201ENST00000216484 MAPK6Q16659 721 aa15.32■□□□□ 0.04
SPTLC2-201ENST00000216484 THNSL1Q8IYQ7 743 aa15.32■□□□□ 0.04
SPTLC2-201ENST00000216484 DDI1Q8WTU0 396 aa15.32■□□□□ 0.04
SPTLC2-201ENST00000216484 ATP6V1G3Q96LB4 118 aa15.32■□□□□ 0.04
SPTLC2-201ENST00000216484 AP4S1Q9Y587 144 aa15.32■□□□□ 0.04
SPTLC2-201ENST00000216484 CDC40O60508 579 aaKnown RBP eCLIP15.32■□□□□ 0.04
SPTLC2-201ENST00000216484 HSD17B4P51659 736 aa15.32■□□□□ 0.04
SPTLC2-201ENST00000216484 PCSK7Q16549 785 aa15.32■□□□□ 0.04
SPTLC2-201ENST00000216484 UBE2SQ16763 222 aa15.32■□□□□ 0.04
SPTLC2-201ENST00000216484 ANKS6Q68DC2 871 aa15.32■□□□□ 0.04
SPTLC2-201ENST00000216484 OTOAQ7RTW8 1153 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms