RNA–Protein interactions for RNA: ENST00000216456.6

VTI1B-201, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 1 (best)

Gene VTI1B, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-201ENST00000216456 MPZL3Q6UWV2 235 aa24.25■■□□□ 1.47
VTI1B-201ENST00000216456 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.25■■□□□ 1.47
VTI1B-201ENST00000216456 DDX27Q96GQ7 796 aaKnown RBP24.25■■□□□ 1.47
VTI1B-201ENST00000216456 DPP7Q9UHL4 492 aa24.25■■□□□ 1.47
VTI1B-201ENST00000216456 H0Y858 1186 aa24.24■■□□□ 1.47
VTI1B-201ENST00000216456 TMEM189-UBE2V1I3L0A0 370 aa24.24■■□□□ 1.47
VTI1B-201ENST00000216456 PI15O43692 258 aa24.24■■□□□ 1.47
VTI1B-201ENST00000216456 C8AP07357 584 aa24.24■■□□□ 1.47
VTI1B-201ENST00000216456 MCF2P10911 925 aa24.24■■□□□ 1.47
VTI1B-201ENST00000216456 NPR3P17342 541 aa24.24■■□□□ 1.47
VTI1B-201ENST00000216456 YARSP54577 528 aaKnown RBP24.24■■□□□ 1.47
VTI1B-201ENST00000216456 PTPN5P54829 565 aa24.24■■□□□ 1.47
VTI1B-201ENST00000216456 CREMQ03060 361 aa24.24■■□□□ 1.47
VTI1B-201ENST00000216456 SPAG1Q07617 926 aa24.24■■□□□ 1.47
VTI1B-201ENST00000216456 ELMSAN1Q6PJG2 1045 aa24.24■■□□□ 1.47
VTI1B-201ENST00000216456 FLCNQ8NFG4 579 aa24.24■■□□□ 1.47
VTI1B-201ENST00000216456 CDK5RAP3Q96JB5 506 aa24.24■■□□□ 1.47
VTI1B-201ENST00000216456 ACAP3Q96P50 834 aa24.24■■□□□ 1.47
VTI1B-201ENST00000216456 NTPCRQ9BSD7 190 aaKnown RBP24.24■■□□□ 1.47
VTI1B-201ENST00000216456 RHOBTB2Q9BYZ6 727 aa24.24■■□□□ 1.47
VTI1B-201ENST00000216456 HCFC1R1Q9NWW0 138 aa24.24■■□□□ 1.47
VTI1B-201ENST00000216456 MTRRQ9UBK8 725 aa24.24■■□□□ 1.47
VTI1B-201ENST00000216456 DUSP12Q9UNI6 340 aa24.24■■□□□ 1.47
VTI1B-201ENST00000216456 RBM19Q9Y4C8 960 aaKnown RBP24.24■■□□□ 1.47
VTI1B-201ENST00000216456 CDY1Q9Y6F8 540 aa24.24■■□□□ 1.47
VTI1B-201ENST00000216456 DOCK8Q8NF50 2099 aa24.23■■□□□ 1.47
VTI1B-201ENST00000216456 PODXLO00592 558 aa24.23■■□□□ 1.47
VTI1B-201ENST00000216456 CFHP08603 1231 aa24.23■■□□□ 1.47
VTI1B-201ENST00000216456 ELAVL2Q12926 359 aaKnown RBP24.23■■□□□ 1.47
VTI1B-201ENST00000216456 ARL6IP4Q66PJ3 421 aaKnown RBP24.23■■□□□ 1.47
VTI1B-201ENST00000216456 SLC7A14Q8TBB6 771 aa24.23■■□□□ 1.47
VTI1B-201ENST00000216456 SPIRE2Q8WWL2 714 aa24.23■■□□□ 1.47
VTI1B-201ENST00000216456 RPP25Q9BUL9 199 aaKnown RBP24.23■■□□□ 1.47
VTI1B-201ENST00000216456 BLOC1S4Q9NUP1 217 aa24.23■■□□□ 1.47
VTI1B-201ENST00000216456 EPS15L1Q9UBC2 864 aa24.23■■□□□ 1.47
VTI1B-201ENST00000216456 POLIQ9UNA4 740 aa24.23■■□□□ 1.47
VTI1B-201ENST00000216456 USP34Q70CQ2 3546 aa24.22■■□□□ 1.47
VTI1B-201ENST00000216456 LAMP2P13473 410 aa24.22■■□□□ 1.47
VTI1B-201ENST00000216456 MCM2P49736 904 aa24.22■■□□□ 1.47
VTI1B-201ENST00000216456 KARSQ15046 597 aaKnown RBP24.22■■□□□ 1.47
VTI1B-201ENST00000216456 SF3A1Q15459 793 aaKnown RBP24.22■■□□□ 1.47
VTI1B-201ENST00000216456 SLC10A6Q3KNW5 377 aa24.22■■□□□ 1.47
VTI1B-201ENST00000216456 SPECC1Q5M775 1068 aa24.22■■□□□ 1.47
VTI1B-201ENST00000216456 PPM1LQ5SGD2 360 aa24.22■■□□□ 1.47
VTI1B-201ENST00000216456 LIN9Q5TKA1 542 aa24.22■■□□□ 1.47
VTI1B-201ENST00000216456 CYP26C1Q6V0L0 522 aa24.22■■□□□ 1.47
VTI1B-201ENST00000216456 GPBP1Q86WP2 473 aa24.22■■□□□ 1.47
VTI1B-201ENST00000216456 SLC44A3Q8N4M1 653 aa24.22■■□□□ 1.47
VTI1B-201ENST00000216456 STAMQ92783 540 aa24.22■■□□□ 1.47
VTI1B-201ENST00000216456 REEP2Q9BRK0 252 aa24.22■■□□□ 1.47
VTI1B-201ENST00000216456 MFSD1Q9H3U5 465 aa24.22■■□□□ 1.47
VTI1B-201ENST00000216456 C17orf75Q9HAS0 396 aa24.22■■□□□ 1.47
VTI1B-201ENST00000216456 TOPORSQ9NS56 1045 aaPredicted RBP24.22■■□□□ 1.47
VTI1B-201ENST00000216456 TUBGCP4Q9UGJ1 667 aa24.22■■□□□ 1.47
VTI1B-201ENST00000216456 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.22■■□□□ 1.47
VTI1B-201ENST00000216456 VPS37CA5D8V6 355 aaPredicted RBP24.21■■□□□ 1.47
VTI1B-201ENST00000216456 C1RP00736 705 aa24.21■■□□□ 1.47
VTI1B-201ENST00000216456 KCNE1P15382 129 aa24.21■■□□□ 1.47
VTI1B-201ENST00000216456 PLCG1P19174 1290 aa24.21■■□□□ 1.47
VTI1B-201ENST00000216456 STRN3Q13033 797 aa24.21■■□□□ 1.47
VTI1B-201ENST00000216456 RAB33AQ14088 237 aa24.21■■□□□ 1.47
VTI1B-201ENST00000216456 MCM6Q14566 821 aa24.21■■□□□ 1.47
VTI1B-201ENST00000216456 ZBTB41Q5SVQ8 909 aa24.21■■□□□ 1.47
VTI1B-201ENST00000216456 AXDND1Q5T1B0 1012 aaPredicted RBP24.21■■□□□ 1.47
VTI1B-201ENST00000216456 ASTLQ6HA08 431 aaPredicted RBP24.21■■□□□ 1.47
VTI1B-201ENST00000216456 FAM173BQ6P4H8 233 aa24.21■■□□□ 1.47
VTI1B-201ENST00000216456 USP49Q70CQ1 688 aa24.21■■□□□ 1.47
VTI1B-201ENST00000216456 APBB1IPQ7Z5R6 666 aaPredicted RBP24.21■■□□□ 1.47
VTI1B-201ENST00000216456 SIX5Q8N196 739 aa24.21■■□□□ 1.47
VTI1B-201ENST00000216456 ITFG1Q8TB96 612 aa24.21■■□□□ 1.47
VTI1B-201ENST00000216456 TIPINQ9BVW5 301 aa24.21■■□□□ 1.47
VTI1B-201ENST00000216456 CNTN3Q9P232 1028 aa24.21■■□□□ 1.47
VTI1B-201ENST00000216456 KRBA1A5PL33 1030 aa24.2■■□□□ 1.46
VTI1B-201ENST00000216456 TOM1L1O75674 476 aa24.2■■□□□ 1.46
VTI1B-201ENST00000216456 CXCL8P10145 99 aa24.2■■□□□ 1.46
VTI1B-201ENST00000216456 FSHRP23945 695 aa24.2■■□□□ 1.46
VTI1B-201ENST00000216456 TNFSF9P41273 254 aa24.2■■□□□ 1.46
VTI1B-201ENST00000216456 NOLC1Q14978 699 aaKnown RBP eCLIP24.2■■□□□ 1.46
VTI1B-201ENST00000216456 UROC1Q96N76 676 aa24.2■■□□□ 1.46
VTI1B-201ENST00000216456 IGSF9Q9P2J2 1179 aa24.2■■□□□ 1.46
VTI1B-201ENST00000216456 FBXL21Q9UKT6 434 aa24.2■■□□□ 1.46
VTI1B-201ENST00000216456 CLIC4Q9Y696 253 aa24.2■■□□□ 1.46
VTI1B-201ENST00000216456 MYO15AQ9UKN7 3530 aa24.19■■□□□ 1.46
VTI1B-201ENST00000216456 UBA7P41226 1012 aa24.19■■□□□ 1.46
VTI1B-201ENST00000216456 GUCY2FP51841 1108 aa24.19■■□□□ 1.46
VTI1B-201ENST00000216456 NCKAP1LP55160 1127 aa24.19■■□□□ 1.46
VTI1B-201ENST00000216456 ARPP19P56211 112 aa24.19■■□□□ 1.46
VTI1B-201ENST00000216456 CUL4AQ13619 759 aa24.19■■□□□ 1.46
VTI1B-201ENST00000216456 HTR4Q13639 388 aa24.19■■□□□ 1.46
VTI1B-201ENST00000216456 VARS2Q5ST30 1063 aaKnown RBP24.19■■□□□ 1.46
VTI1B-201ENST00000216456 POTEHQ6S545 545 aa24.19■■□□□ 1.46
VTI1B-201ENST00000216456 HAUS6Q7Z4H7 955 aa24.19■■□□□ 1.46
VTI1B-201ENST00000216456 DNMT3BQ9UBC3 853 aaKnown RBP24.19■■□□□ 1.46
VTI1B-201ENST00000216456 CA14Q9ULX7 337 aa24.19■■□□□ 1.46
VTI1B-201ENST00000216456 NUMBLQ9Y6R0 609 aa24.19■■□□□ 1.46
VTI1B-201ENST00000216456 GALR2O43603 387 aaPredicted RBP24.18■■□□□ 1.46
VTI1B-201ENST00000216456 MATR3P43243 847 aaKnown RBP eCLIP24.18■■□□□ 1.46
VTI1B-201ENST00000216456 SMTNP53814 917 aa24.18■■□□□ 1.46
VTI1B-201ENST00000216456 MCL1Q07820 350 aa24.18■■□□□ 1.46
VTI1B-201ENST00000216456 PARM1Q6UWI2 310 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms