RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 Ppm1aP49443 382 aa16.3■□□□□ 0.2
Upf1-202ENSMUST00000215817 SPINDOCQ05AH6 381 aa16.3■□□□□ 0.2
Upf1-202ENSMUST00000215817 Scarf1Q5ND28 820 aa16.3■□□□□ 0.2
Upf1-202ENSMUST00000215817 Ccdc157Q5SPX1 718 aa16.3■□□□□ 0.2
Upf1-202ENSMUST00000215817 Myl6Q60605 151 aaKnown RBP16.3■□□□□ 0.2
Upf1-202ENSMUST00000215817 Cln3Q61124 438 aa16.3■□□□□ 0.2
Upf1-202ENSMUST00000215817 Sh3gl1Q62419 368 aa16.3■□□□□ 0.2
Upf1-202ENSMUST00000215817 Trmt13Q8BYH3 481 aa16.3■□□□□ 0.2
Upf1-202ENSMUST00000215817 PdxkQ8K183 312 aa16.3■□□□□ 0.2
Upf1-202ENSMUST00000215817 Usp29Q9ES63 869 aa16.3■□□□□ 0.2
Upf1-202ENSMUST00000215817 Mettl1Q9Z120 268 aa16.3■□□□□ 0.2
Upf1-202ENSMUST00000215817 PfasQ5SUR0 1337 aa16.3■□□□□ 0.2
Upf1-202ENSMUST00000215817 CstaP56567 97 aa16.29■□□□□ 0.2
Upf1-202ENSMUST00000215817 Map3k7clP58500 142 aa16.29■□□□□ 0.2
Upf1-202ENSMUST00000215817 Trmt1Q3TX08 663 aa16.29■□□□□ 0.2
Upf1-202ENSMUST00000215817 Dennd1bQ3U1T9 766 aa16.29■□□□□ 0.2
Upf1-202ENSMUST00000215817 Sin3bQ62141 1098 aa16.29■□□□□ 0.2
Upf1-202ENSMUST00000215817 Fnbp1Q80TY0 616 aa16.29■□□□□ 0.2
Upf1-202ENSMUST00000215817 Spata20Q80YT5 790 aa16.29■□□□□ 0.2
Upf1-202ENSMUST00000215817 Cnga3Q9JJZ8 631 aa16.29■□□□□ 0.2
Upf1-202ENSMUST00000215817 Myo1aO88329 1043 aa16.29■□□□□ 0.2
Upf1-202ENSMUST00000215817 JchainP01592 159 aa16.29■□□□□ 0.2
Upf1-202ENSMUST00000215817 MafP54843 370 aa16.29■□□□□ 0.2
Upf1-202ENSMUST00000215817 Tas2r134Q7TQB0 298 aa16.29■□□□□ 0.2
Upf1-202ENSMUST00000215817 Tbc1d15Q9CXF4 671 aa16.29■□□□□ 0.2
Upf1-202ENSMUST00000215817 Mrpl2Q9D773 306 aaKnown RBP16.29■□□□□ 0.2
Upf1-202ENSMUST00000215817 Zscan4-ps1A0A1C7CYV3 506 aa16.29■□□□□ 0.2
Upf1-202ENSMUST00000215817 Dhtkd1A2ATU0 921 aa16.29■□□□□ 0.2
Upf1-202ENSMUST00000215817 Gm14525B1AZA0 212 aa16.29■□□□□ 0.2
Upf1-202ENSMUST00000215817 Gm2012B1B0R1 212 aa16.29■□□□□ 0.2
Upf1-202ENSMUST00000215817 StrnO55106 780 aa16.29■□□□□ 0.2
Upf1-202ENSMUST00000215817 Gdap1O88741 358 aa16.29■□□□□ 0.2
Upf1-202ENSMUST00000215817 Abi2P62484 446 aa16.29■□□□□ 0.2
Upf1-202ENSMUST00000215817 Atp9bP98195 1146 aa16.29■□□□□ 0.2
Upf1-202ENSMUST00000215817 Sema5bQ60519 1093 aa16.29■□□□□ 0.2
Upf1-202ENSMUST00000215817 Tpd52Q62393 224 aa16.29■□□□□ 0.2
Upf1-202ENSMUST00000215817 Gm14819Q62478 212 aa16.29■□□□□ 0.2
Upf1-202ENSMUST00000215817 Tsen34Q8BMZ5 316 aa16.29■□□□□ 0.2
Upf1-202ENSMUST00000215817 Sept10Q8C650 452 aa16.29■□□□□ 0.2
Upf1-202ENSMUST00000215817 GarsQ9CZD3 729 aaKnown RBP16.29■□□□□ 0.2
Upf1-202ENSMUST00000215817 Myo1cQ9WTI7 1063 aa16.29■□□□□ 0.2
Upf1-202ENSMUST00000215817 Gm8994E9PV04 411 aaKnown RBP16.29■□□□□ 0.2
Upf1-202ENSMUST00000215817 AunipE9Q6Z5 340 aa16.29■□□□□ 0.2
Upf1-202ENSMUST00000215817 TazI7HJS2 263 aa16.29■□□□□ 0.2
Upf1-202ENSMUST00000215817 Irx1P81068 480 aa16.29■□□□□ 0.2
Upf1-202ENSMUST00000215817 Vps41Q5KU39 853 aa16.29■□□□□ 0.2
Upf1-202ENSMUST00000215817 Zcchc2Q69ZB8 1166 aa16.29■□□□□ 0.2
Upf1-202ENSMUST00000215817 Tas2r125Q7M710 311 aa16.29■□□□□ 0.2
Upf1-202ENSMUST00000215817 Olfr389Q7TRX7 312 aa16.29■□□□□ 0.2
Upf1-202ENSMUST00000215817 F13a1Q8BH61 732 aa16.29■□□□□ 0.2
Upf1-202ENSMUST00000215817 Rassf2Q8BMS9 326 aa16.29■□□□□ 0.2
Upf1-202ENSMUST00000215817 Gdap1l1Q8VE33 370 aa16.29■□□□□ 0.2
Upf1-202ENSMUST00000215817 Cd97Q9Z0M6 818 aa16.29■□□□□ 0.2
Upf1-202ENSMUST00000215817 Wfdc16A2A5H4 111 aa16.28■□□□□ 0.2
Upf1-202ENSMUST00000215817 Mroh7A2AVR2 1279 aa16.28■□□□□ 0.2
Upf1-202ENSMUST00000215817 Gm3371F7CQW8 167 aa16.28■□□□□ 0.2
Upf1-202ENSMUST00000215817 IkbkbO88351 757 aa16.28■□□□□ 0.2
Upf1-202ENSMUST00000215817 Rufy4Q3TYX8 563 aa16.28■□□□□ 0.2
Upf1-202ENSMUST00000215817 Ttf2Q5NC05 1138 aa16.28■□□□□ 0.2
Upf1-202ENSMUST00000215817 Snx9Q91VH2 595 aa16.28■□□□□ 0.2
Upf1-202ENSMUST00000215817 Krt7Q9DCV7 457 aa16.28■□□□□ 0.2
Upf1-202ENSMUST00000215817 JmyQ9QXM1 983 aa16.28■□□□□ 0.2
Upf1-202ENSMUST00000215817 Lrrc73B2RWC4 316 aa16.28■□□□□ 0.2
Upf1-202ENSMUST00000215817 Pstpip1P97814 415 aa16.28■□□□□ 0.2
Upf1-202ENSMUST00000215817 Adat2Q6P6J0 191 aa16.28■□□□□ 0.2
Upf1-202ENSMUST00000215817 Tcp10aQ80W76 438 aa16.28■□□□□ 0.2
Upf1-202ENSMUST00000215817 Slc12a6Q924N4 1150 aa16.28■□□□□ 0.2
Upf1-202ENSMUST00000215817 Dhx58Q99J87 678 aa16.28■□□□□ 0.2
Upf1-202ENSMUST00000215817 Abhd2Q9QXM0 425 aa16.28■□□□□ 0.2
Upf1-202ENSMUST00000215817 Col11a2Q64739 1736 aa16.28■□□□□ 0.2
Upf1-202ENSMUST00000215817 TprnA2AI08 749 aaKnown RBP16.28■□□□□ 0.2
Upf1-202ENSMUST00000215817 Rap1gapA2ALS5 663 aa16.28■□□□□ 0.2
Upf1-202ENSMUST00000215817 Zfp266E9Q2S7 604 aa16.28■□□□□ 0.2
Upf1-202ENSMUST00000215817 Tcp1P11983 556 aaKnown RBP16.28■□□□□ 0.2
Upf1-202ENSMUST00000215817 Arl4aP61213 200 aa16.28■□□□□ 0.2
Upf1-202ENSMUST00000215817 Irx2P81066 474 aa16.28■□□□□ 0.2
Upf1-202ENSMUST00000215817 rp9P97762 213 aa16.28■□□□□ 0.2
Upf1-202ENSMUST00000215817 Tubb5P99024 444 aaKnown RBP16.28■□□□□ 0.2
Upf1-202ENSMUST00000215817 Mageb16Q9CWV4 363 aa16.28■□□□□ 0.2
Upf1-202ENSMUST00000215817 Gbp2Q9Z0E6 589 aa16.28■□□□□ 0.2
Upf1-202ENSMUST00000215817 TnfP06804 235 aa16.27■□□□□ 0.2
Upf1-202ENSMUST00000215817 Ppp4r3cQ3V0Y1 813 aa16.27■□□□□ 0.2
Upf1-202ENSMUST00000215817 Mpzl3Q3V3F6 237 aa16.27■□□□□ 0.2
Upf1-202ENSMUST00000215817 Tbc1d31Q6NXY1 996 aa16.27■□□□□ 0.2
Upf1-202ENSMUST00000215817 Pcyox1Q9CQF9 505 aa16.27■□□□□ 0.2
Upf1-202ENSMUST00000215817 Ska2Q9CR46 120 aa16.27■□□□□ 0.2
Upf1-202ENSMUST00000215817 Gm45208A0A140LJ36 292 aa16.27■□□□□ 0.2
Upf1-202ENSMUST00000215817 Zfp472B0V2W5 534 aa16.27■□□□□ 0.2
Upf1-202ENSMUST00000215817 Slc15a5Q8CBB2 566 aa16.27■□□□□ 0.2
Upf1-202ENSMUST00000215817 Tm4sf4Q91XD3 202 aa16.27■□□□□ 0.2
Upf1-202ENSMUST00000215817 Pcdhgb4Q91XX6 912 aa16.27■□□□□ 0.2
Upf1-202ENSMUST00000215817 Q9D1F3 157 aa16.27■□□□□ 0.2
Upf1-202ENSMUST00000215817 AatfQ9JKX4 526 aaKnown RBP16.27■□□□□ 0.2
Upf1-202ENSMUST00000215817 Scgb2b18A0A087WPA9 112 aa16.27■□□□□ 0.2
Upf1-202ENSMUST00000215817 EpoP07321 192 aa16.27■□□□□ 0.2
Upf1-202ENSMUST00000215817 Alkbh1P0CB42 389 aa16.27■□□□□ 0.2
Upf1-202ENSMUST00000215817 SnrpfP62307 86 aaKnown RBP16.27■□□□□ 0.2
Upf1-202ENSMUST00000215817 Kcnq1P97414 668 aa16.27■□□□□ 0.2
Upf1-202ENSMUST00000215817 Pdlim7Q3TJD7 457 aa16.27■□□□□ 0.2
Upf1-202ENSMUST00000215817 Gja6Q6S5G4 283 aa16.27■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 18.2 ms